GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:04:55

Sequence gi568815587f:76695617_76896675 : 201059 bp : 46.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 Intr -   1299   1125  175  0  1   48   80   124 0.522   7.11
 1.07 Intr -   7911   7719  193  2  1  115  100   197 0.998  23.09
 1.06 Intr -   8708   8545  164  2  2   93   86   198 0.992  18.87
 1.05 Intr -  16799  16651  149  0  2   40  100   136 0.472   9.95
 1.04 Intr -  17570  17492   79  2  1   77   19    67 0.370  -2.18
 1.03 Intr -  21026  20930   97  1  1  106   94   126 0.930  15.01
 1.02 Intr -  23615  23473  143  2  2   50   22    57 0.169  -5.55
 1.01 Init -  24383  23952  432  2  0   75   96   331 0.475  26.81
 1.00 Prom -  32122  32083   40                              -3.56

 2.00 Prom +  38618  38657   40                              -2.86
 2.01 Init +  42539  42598   60  1  0   84   58    78 0.591   3.97
 2.02 Intr +  43167  43340  174  2  0  108   54    25 0.434   1.24
 2.03 Term +  50256  50426  171  2  0  109   42    84 0.650   3.73
 2.04 PlyA +  53424  53429    6                               1.05

 3.03 PlyA -  54870  54865    6                               1.05
 3.02 Term -  57454  57246  209  2  2   92   46    78 0.857   1.50
 3.01 Init -  60809  60707  103  2  1  104   53   169 0.989  13.44
 3.00 Prom -  69447  69408   40                              -2.06

 4.00 Prom +  73331  73370   40                              -4.46
 4.01 Init +  73429  73431    3  0  0   60  115     0 0.370  -0.10
 4.02 Intr +  73833  73911   79  2  1   64   66    59 0.222   0.42
 4.03 Intr +  74644  74769  126  2  0   60   92    45 0.248   2.75
 4.04 Intr +  84049  84108   60  2  0   35  111    66 0.315   2.31
 4.05 Term +  87952  88649  698  2  2   41   42   295 0.427  13.92
 4.06 PlyA +  90368  90373    6                               1.05

 5.00 Prom +  92079  92118   40                              -3.76
 5.01 Sngl + 100001 101062 1062  1  0  108   48  1238 0.996 116.96
 5.02 PlyA + 102509 102514    6                               1.05

 6.05 PlyA - 105263 105258    6                               1.05
 6.04 Term - 112203 112114   90  0  0   22   49   115 0.021  -1.28
 6.03 Intr - 123830 123680  151  1  1   47   77   101 0.571   5.06
 6.02 Intr - 126403 126235  169  2  1   81   67    98 0.415   6.00
 6.01 Init - 132505 131626  880  1  1   55   11   298 0.065  13.44
 6.00 Prom - 135175 135136   40                              -3.96

 7.00 Prom + 135974 136013   40                              -4.06
 7.01 Init + 165361 165463  103  0  1   91   65   249 0.891  23.30
 7.02 Intr + 168149 168231   83  0  2   70   98    -1 0.086  -1.54
 7.03 Intr + 182486 182548   63  1  0  106   73    41 0.018   3.31
 7.04 Term + 182625 182747  123  2  0   48   42    78 0.018  -2.42
 7.05 PlyA + 183064 183069    6                               1.05

 8.03 PlyA - 183674 183669    6                               1.05
 8.02 Term - 183902 183744  159  2  0  122   44    27 0.262  -0.36
 8.01 Intr - 187616 187501  116  0  2   65   33   113 0.331   3.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:76695617_76896675|GENSCAN_predicted_peptide_1|478_aa
MGVGWQQSGCPGVPSSSPGLENCGLQGRPQWNWACKGDPATSGPSCGAVDALGGAGGLGD
DHPAEPCAWAEGLVDGRLVFLPYDMLLFSLSYCNRSYLSLGTGGPLQEAYDAVLTISQES
GPIDKAFAAARPDGEAAAHLEPEQSLGVVNRFLLLVCVCVYVYVYVYVYVYVYVYVYVYV
YVYVYVYVYVYVLGIHQLQLVWGPHRILLTAQELTFIHPPLNRQMRELRCENVATCLGIF
VISGEPASERELLWTAPELLPGPGRPGRRTLTGDIFSTGIILQEVLTRAHSTAPRDFQWK
FKSINQGKRTSVADSMLWLLEKYSQNLEDLIQEQTEELELKREKTERLLCQMIPPSVAEA
RKMGATVEPGYFDQVTIYFSDIVGFTIISALSEPIEAVGLLNDLYMLFDAVLGSHDLYKV
ETIGDAYMVVWGLPQCNGSQHAAEINNMALDILGSVGDFRKRHAPNVPICIRAGLHSX

>gi568815587f:76695617_76896675|GENSCAN_predicted_CDS_1|1434_bp
atgggggtggggtggcagcagagcgggtgcccgggagttccgagcagctctccagggcta
gagaactgtgggcttcagggcaggccacagtggaactgggcctgcaaaggtgaccctgcc
acctctggccccagttgtggtgctgtggatgcactcggcggtgctggggggcttggagat
gaccaccctgctgagccgtgtgcctgggccgagggcctggtggatgggagattagtcttc
ctgccctatgacatgctgctcttctccctgtcctactgcaaccgctcctacctgtctctc
ggcactggtggacccctgcaggaggcctatgatgcagtgctcaccatcagccaggagtct
ggccccatagacaaggcctttgctgctgcccggcctgatggagaggcggctgcccacctt
gagccagagcagtccctgggtgtggtcaatcgctttctccttcttgtatgtgtatgtgtg
tatgtatatgtatatgtatatgtatatgtatatgtatatgtgtacgtgtacgtgtacgtg
tacgtgtacgtgtacgtgtacgtgtacgtgtatgttttgggcatccaccagctgcagctg
gtgtggggcccccaccggatcctgctgacagcccaggagctcaccttcatccatccaccc
ctgaacagacagatgcgggagctgcggtgtgagaacgtcgccacctgcctgggcattttc
gtgatctctggggaacctgcttcggaaagagagctgctatggacagctcctgagctgctg
ccggggcctgggcgccctgggcggcgcaccctcacaggggacatcttcagcactggcatc
atcctgcaggaggtgctgactcgggcccactctactgctcctcgggacttccagtggaag
ttcaaaagcatcaaccaaggcaagaggaccagtgttgctgactccatgctgtggttgctg
gagaaatattcccagaacctggaggacctgattcaggagcagactgaggaactggagctg
aagagagagaagacagaaaggctgctctgtcagatgattcccccgtctgtggctgaagct
cggaaaatgggggcaactgtggaaccagggtattttgaccaggttaccatatacttcagt
gacattgtgggtttcaccatcatctcagccctgagtgaacccattgaggcggtgggcttg
ctcaacgatctctacatgctgtttgatgctgttctgggcagccatgacctgtataaggtg
gagaccattggggacgcctacatggtggtgtgggggctgcctcagtgcaatggcagtcag
catgcggccgagatcaataacatggctctggatatccttggctctgtgggtgacttccgg
aagaggcatgcacccaacgtgcccatttgcatcagggctggcctgcattcagnn

>gi568815587f:76695617_76896675|GENSCAN_predicted_peptide_2|134_aa
MLPGAILTAAIPTPGRSLALVRKLRPSKSWQDQAQNTGDKESERRKGPGGKMRAGQRVPR
GEKQEERRMGAERAQRAMEDHPHTAPDKLHNPSPYIRVCFWGNPNEDTMEEAEAMVQRRD
NELNLERDCEGGEN

>gi568815587f:76695617_76896675|GENSCAN_predicted_CDS_2|405_bp
atgcttcctggagccatcctcacagctgctattcccactccagggaggagcctggctctg
gtgagaaaactgaggcccagcaaatcatggcaggatcaggctcagaatacaggtgacaaa
gagagcgaaagaagaaagggccctggaggaaagatgagagctggacagagagttccaagg
ggtgagaagcaggaggagagacgaatgggagcggaaagggcgcagcgggctatggaggat
cacccccacactgcccctgataaactacataacccaagtccttatatcagggtctgcttt
tgggggaaccctaatgaagacaccatggaggaggctgaggcaatggtgcagaggagagat
aacgaactgaacctggagagggactgtgagggcggagagaactga

>gi568815587f:76695617_76896675|GENSCAN_predicted_peptide_3|103_aa
MAWQRALLQLAGPSFHAVLLVAGRSDGRKGSLDTDVAHVWLPPNALILEGPDSFQMGAVT
ASFPESSRQAARPSGGAAQGLSLPLGEVPLTSFRVLLCVVRAL

>gi568815587f:76695617_76896675|GENSCAN_predicted_CDS_3|312_bp
atggcctggcagagggccctgctgcagctggcaggaccaagtttccatgcggtgctgctg
gtggctgggaggagtgatggccgcaagggttccttggacacagacgtggctcatgtctgg
cttcctcccaacgccctcatccttgagggacctgacagcttccagatgggtgcggtcact
gcctccttcccggagtccagcaggcaggcagcccggcccagcggaggagctgcccaaggc
ctctccctgcccctgggggaagtccctctcacgtcctttcgcgtccttctctgcgtcgtc
cgggccctctga

>gi568815587f:76695617_76896675|GENSCAN_predicted_peptide_4|321_aa
MPPKALEGKQVVQPWLQPGHQGPKPSTGHSPSMCACVQISSPYQDNGHTGLEPILLTSSS
LNYLLPEPLWLFEKRDLPTDHPQLQYGCSGLGGSGERRPRGEVLRETKATPRGRVGLCAD
TCISRLWVFVDLRSGTRRCRCLCVSVALRGCFAPVSTFAGLRLAVGVGGRIACLRVRGRC
LPTCLGWVSAEGVRTESPTPPHPPAPPPSPRAHDLAPNFSPGSSGNSPSPPHRYPAGGAD
SPPPPPPEVPGQQGAATGLVVGGSAAPGDWLGRGWAERADSPSDPGWEEEASGGSQAPAL
GWGEEGTGRLALPSPRFLERV

>gi568815587f:76695617_76896675|GENSCAN_predicted_CDS_4|966_bp
atgcctcccaaagccttggagggcaagcaagtggtccagccatggctgcagcctggacac
caaggacctaagcccagcacagggcattctccctctatgtgtgcctgcgtccagatttct
tctccttatcaggacaatggtcatactggattagagcccatcctgctgacctcatcttca
ctaaattaccttctccctgagcctctatggctcttcgagaaaagagatcttccaacagat
cacccgcagcttcagtatggctgttcagggctgggcgggagtggggaacgccgacccagg
ggagaggtcttgcgggagacaaaggctacgcccaggggccgtgtgggtctttgtgcggac
acgtgcatctcacgtttgtgggtctttgtggatttgcggtcggggacgcgccgctgtcgg
tgcctttgtgtgtccgtggctttgcgcggctgctttgcgcccgtgtccacgtttgcgggc
ctgcgcttggctgtgggcgtcggtgggcgcatcgcgtgtctccgcgtacgtggtcggtgc
ctgccgacgtgtctgggctgggtgtccgcagagggtgtgcgcaccgagagcccaacgccg
ccccacccccccgctcccccgccgtcccctcgggcccacgacttggctccaaacttttct
cccggttcctcgggcaacagccccagtcctccccaccgctacccggccgggggcgcagac
agccctccccctccccctcctgaggtcccaggacagcaaggggctgcgacgggattggtg
gtcgggggatcggcagcgcctggggactggctgggcaggggctgggcggagcgtgcggac
tccccctcagaccccggctgggaggaagaggcgagcggtgggtcccaggctccggccctg
ggctggggagaggaagggacagggcggctggcgttgccctccccgcgcttcttggaaaga
gtgtga

>gi568815587f:76695617_76896675|GENSCAN_predicted_peptide_5|353_aa
MPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDT
AHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGL
TALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAG
LPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQ
RLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLL
HLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRDSAARGPTIL

>gi568815587f:76695617_76896675|GENSCAN_predicted_CDS_5|1062_bp
atgccgtggcccctgctgctgctgctggccgtgagtggggcccagacaacccggccatgc
ttccccgggtgccaatgcgaggtggagaccttcggccttttcgacagcttcagcctgact
cgggtggattgtagcggcctgggcccccacatcatgccggtgcccatccctctggacaca
gcccacttggacctgtcctccaaccggctggagatggtgaatgagtcggtgttggcgggg
ccgggctacacgacgttggctggcctggatctcagccacaacctgctcaccagcatctca
cccactgccttctcccgccttcgctacctggagtcgcttgacctcagccacaatggcctg
acagccctgccagccgagagcttcaccagctcacccctgagcgacgtgaaccttagccac
aaccagctccgggaggtctcagtgtctgccttcacgacgcacagtcagggccgggcacta
cacgtggacctctcccacaacctcattcaccgcctcgtgccccaccccacgagggccggc
ctgcctgcgcccaccattcagagcctgaacctggcctggaaccggctccatgccgtgccc
aacctccgagacttgcccctgcgctacctgagcctggatgggaaccctctagctgtcatt
ggtccgggtgccttcgcggggctgggaggccttacacacctgtctctggccagcctgcag
aggctccctgagctggcgcccagtggcttccgtgagctaccgggcctgcaggtcctggac
ctgtcgggcaaccccaagcttaactgggcaggagctgaggtgttttcaggcctgagctcc
ctgcaggagctggacctttcgggcaccaacctggtgcccctgcctgaggcgctgctcctc
cacctcccggcactgcagagcgtcagcgtgggccaggatgtgcggtgccggcgcctggtg
cgggagggcacctacccccggaggcctggctccagccccaaggtggccctgcactgcgta
gacacccgggattctgctgccaggggccccaccatcttgtga

>gi568815587f:76695617_76896675|GENSCAN_predicted_peptide_6|429_aa
MKDLFKENYKPLLNEIKEDTNKWKNIPSSWRGRINIMKMAILPKVIYRFNAIPIKLPTTF
FTELEKITLKFIWNQKRARITKSILSQKNKAGGIMLPDFKLYYKATVTKTAWYWYQNRDI
DQWNRTEPSEIMPHIYSYLIFDKPEKNKQWGTDSLFNKWCWENWLAICTKLKLDPFLTPY
TKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIKL
KSFCTAKETTIRVNRQPTEWEKIFAIYSSDKGLISRIYNELKQIYKKKTTPSKSRRIFLS
TEQNEKSPMSTSFYTDTATIRFLNLFPTFPPFPLHRTAIVIMARSQRAVGSWNRKHGKAW
PYQIIRMLEVEAFILGQKESSQWAIASGGKTCNWHQCPPKVESSFIGGEDVKVESLVAAE
NRCSSDFCV

>gi568815587f:76695617_76896675|GENSCAN_predicted_CDS_6|1290_bp
atgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggacaca
aacaaatggaagaacattccaagctcatggagaggaagaatcaatatcatgaaaatggcc
atactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaacgactttc
ttcacagaattggaaaaaattactttaaagttcatatggaaccaaaaaagagcccgcatc
actaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgacttcaaa
ctatactacaaggctacagtaaccaaaacagcctggtactggtaccaaaacagagatata
gatcaatggaacagaacagagccctcagaaataatgccacatatctacagctatctgatc
tttgataaacccgagaaaaacaagcaatggggaacggattccctatttaataaatggtgc
tgggaaaactggctagccatatgtacaaagctgaaactggatcccttccttacaccttac
acaaaaattaattcaagatggattaaagacttaaacgttagacctaaaaccataaaaacc
ctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatgtct
aaaacaccaaaagcaatggcaacaaaagccaaaatcgacaaatgggatctaattaaatta
aagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgg
gagaaaatttttgcaatctactcatctgacaaagggctaatatccagaatctacaatgaa
ctcaaacaaatttacaagaaaaaaacaaccccatcaaaaagcagaagaatttttcttagt
acagaacaaaatgaaaagtctcccatgtctacttctttctacacagacacggcaaccatc
cgatttctcaatcttttccccacctttcccccctttccactccacagaactgccattgtc
atcatggcccgttctcaacgagctgttggctcatggaacaggaaacatgggaaagcttgg
ccttatcaaattataaggatgctagaagtcgaggccttcatcctgggacaaaaggaaagc
tcacagtgggccatcgcctctggtgggaaaacttgcaactggcaccagtgcccacctaag
gttgaaagttcttttatcggaggggaagatgtgaaagtggagtccttggtggctgctgaa
aaccgctgctcatcagacttctgcgtctga

>gi568815587f:76695617_76896675|GENSCAN_predicted_peptide_7|123_aa
MAPAADREGYWGPTTSTLDWCEENYSVTWYIAEFLISKRRYYYPHFKDKEIEVLRNNLPK
ITVFAVTDKAAVNILVHLLVHRNVGAKVIAVFAITFNGKTLNYFCNDLIEILEFFGLMTP
LHI

>gi568815587f:76695617_76896675|GENSCAN_predicted_CDS_7|372_bp
atggctccggccgcggaccgagagggctactggggccccacgacctccacgctggactgg
tgcgaggagaactactccgtgacctggtacatcgccgagttcttaatttcaaaaagaagg
tattattatccccatttcaaagataaggagattgaagttctaagaaataatttacctaag
attacagtttttgctgttacagataaggctgctgtgaacattcttgtgcatcttctggta
cacagaaatgttggtgcaaaagtaattgcggtttttgccattactttcaatggcaaaacc
ctcaattacttttgcaatgacctaatagaaattctcgaattttttggtctcatgacccct
ttacacatttaa

>gi568815587f:76695617_76896675|GENSCAN_predicted_peptide_8|91_aa
XKYGKIQDNTKRDYLEAPECKKQTNSNAGYTFQEGELYKVKKRQGCSLMMSFLLNIALEV
LASAIAQAKEIKCIKIGKKEVKLLFEDYMIK

>gi568815587f:76695617_76896675|GENSCAN_predicted_CDS_8|276_bp
naaaaatacggtaaaatccaggataatacaaaaagagattatctggaagcaccggagtgt
aagaagcagacaaattctaatgcagggtacacatttcaagaaggggagctgtacaaagtc
aagaaaaggcaaggatgttcactcatgatgtcatttctactcaacattgccctggaggtc
ctagccagtgcaatagcacaagcaaaagaaataaaatgcataaagattggaaagaaagaa
gtgaaacttctatttgaagattacatgattaaatga