GENSCAN 1.0	Date run: 17-Feb-117	Time: 10:50:19

Sequence gi568815587f:62142308_62343478 : 201171 bp : 43.75% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2675   2784  110  1  2   99   87   239 0.951  23.98
 1.02 Intr +   2862   2982  121  0  1  108   81   306 0.947  32.40
 1.03 Intr +   3322   3456  135  0  0   44   80   223 0.704  17.86
 1.04 Intr +   4351   4595  245  0  2  108   78   518 0.994  49.10
 1.05 Intr +   6169   6247   79  1  1   52  100   219 0.727  19.05
 1.06 Intr +   6432   6539  108  2  0   89   50   231 0.607  19.88
 1.07 Intr +   7750   7900  151  0  1   70   99   138 0.760  12.84
 1.08 Term +   9455   9669  215  0  2   89   54   263 0.999  20.39
 1.09 PlyA +  10000  10005    6                               1.05

 2.00 Prom +  16939  16978   40                              -3.86
 2.01 Init +  17866  18029  164  0  2   70   71    70 0.040   2.71
 2.02 Intr +  20309  20461  153  2  0   61   94    49 0.046   1.99
 2.03 Intr +  26925  27389  465  0  0   91  -69   579 0.450  34.74
 2.04 Term +  27398  27557  160  2  1   19   51   234 0.696  10.21
 2.05 PlyA +  30375  30380    6                               1.05

 3.00 Prom +  36241  36280   40                              -4.96
 3.01 Init +  47978  48032   55  1  1  112   84   116 0.998  13.15
 3.02 Intr +  49749  49936  188  1  2   72   19   112 0.483   2.11
 3.03 Intr +  50158  50206   49  0  1  107   38    87 0.788   3.85
 3.04 Term +  64002  64135  134  1  2   88   42    99 0.192   3.55
 3.05 PlyA +  64535  64540    6                               1.05

 4.00 Prom +  66329  66368   40                              -6.26
 4.01 Init +  66425  66479   55  1  1   91  109   177 0.999  19.56
 4.02 Intr +  68106  68293  188  1  2  115   46   174 0.674  15.31
 4.03 Intr +  85289  85325   37  1  1   73   82    28 0.052  -1.46
 4.04 Intr +  87430  87539  110  2  2   68   76    59 0.124   2.70
 4.05 Term +  89903  90112  210  1  0   54   48    81 0.137  -2.01
 4.06 PlyA +  91705  91710    6                               1.05

 5.00 Prom +  98418  98457   40                              -1.96
 5.01 Init + 100001 100055   55  1  1  114   96   121 0.993  15.33
 5.02 Intr + 100982 101169  188  0  2   88   53   108 0.927   6.71
 5.03 Intr + 102036 102199  164  2  2  101   40    10 0.121  -3.73
 5.04 Intr + 104190 104235   46  0  1   92  110    32 0.099   4.21
 5.05 Intr + 109865 109931   67  1  1   61   52    83 0.014   0.48
 5.06 Intr + 127634 127769  136  0  1   51   13    92 0.029  -2.37
 5.07 Intr + 127855 127964  110  1  2   29  109   186 0.067  14.73
 5.08 Intr + 128574 128761  188  1  2   72   46   145 0.452   8.11
 5.09 Term + 147408 147941  534  2  0  -18   42   231 0.181   2.15
 5.10 PlyA + 148119 148124    6                               1.05

 6.00 Prom + 148361 148400   40                              -7.26
 6.01 Init + 148744 149870 1127  0  2   60   53   286 0.898  15.97
 6.02 Term + 150797 150917  121  2  1   49   50    97 0.649  -0.05
 6.03 PlyA + 151694 151699    6                               1.05

 7.03 PlyA - 153993 153988    6                               1.05
 7.02 Term - 155351 155161  191  0  2   86   28   103 0.441   1.71
 7.01 Init - 156703 156649   55  1  1  112   96    90 0.998  11.67
 7.00 Prom - 159843 159804   40                              -5.06

 8.03 PlyA - 160337 160332    6                               1.05
 8.02 Term - 161924 161608  317  0  2   21   42   181 0.669   1.90
 8.01 Init - 164803 164749   55  1  1   92  100    67 0.927   9.75
 8.00 Prom - 167332 167293   40                              -4.26

 9.00 Prom + 172315 172354   40                              -6.26
 9.01 Init + 174519 174577   59  2  2   67   72    56 0.218   2.68
 9.02 Intr + 179685 179770   86  0  2   80   61    82 0.364   4.16
 9.03 Term + 188959 189227  269  2  2   22   50   416 0.846  26.86
 9.04 PlyA + 189804 189809    6                               1.05

10.00 Prom + 192984 193023   40                              -6.46
10.01 Init + 195671 195860  190  1  1   99   99   347 0.048  36.07
10.02 Intr + 198303 198416  114  1  0   57   81    55 0.352   2.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 109865 109954   90  1  0   61   45   112 0.924   1.92
S.002 Intr + 195660 195860  201  1  0   94   99   388 0.917  39.76


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:62142308_62343478|GENSCAN_predicted_peptide_1|387_aa
EKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEK
KKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQVR
AQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQE
RREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQ
LQEEQEKKAKEAAGASKALNVTVDVQSPACTSYQMTPQGHRAPPKINPDNYGMDLNSDDS
TDDEAHPRKPIPTWARGTPLSQAIIHQYYHPPNLLELFGTILPLDLEDIFKKSKPRYHKR
TSSAVWNSPPLQGARVPSSLAYSLKKH

>gi568815587f:62142308_62343478|GENSCAN_predicted_CDS_1|1164_bp
gagaaggagcggcagcgcctggagaatctgcggcggaaggaggaggccgagcagctgcgc
aggcagaaggtggaggaggacaagcggcggcggctggaggaggtgaagctgaagcgtgag
gaacgcctccgcaaggtgctgcaggcccgcgagcgggtggagcagatgaaggaggagaag
aagaagcagattgagcagaagtttgctcagatcgacgagaagactgagaaggccaaggag
gagcggctggcagaggagaaggccaagaaaaaggcggcggccaagaagatggaggaggtg
gaagcacgcaggaagcaggaagaggaggcacgtaggctcaggtggctgcagcaggtgcga
gcacaggaggaggaagagcggcggcaccaagagctgctgcagaagaagaaggaagaggag
caggagcggctgcggaaggcggccgaggctaagcggctggcagagcagcgggagcaggag
cggcgggagcaggagcggcgcgagcaggagcggcgcgagcaggagcggcgggagcaggag
cggcgcgagcaggagcgacagctggcagagcaggagcgtcggcgggagcaggagcggctc
caggccgagagggagctgcaggagcgggagaaggccctgcggctgcagaaggagcagctg
cagagggaactggaggagaagaagaagaaggaagagcagcagcgtctggctgagcggcag
ctgcaggaggagcaagagaagaaagccaaggaggcagcaggggccagcaaggccctgaat
gtgactgtggacgtgcagtctccagcttgtacctcatatcagatgactccgcaagggcac
agggcccctcccaagatcaacccagataactacgggatggatctgaatagcgacgactcc
accgatgatgaggcccatccccggaagcccatccccacctgggcccgaggcaccccgctc
agccaggctatcattcaccagtactaccacccaccgaaccttctggagctctttggaacc
attctcccactggacttggaggatatcttcaagaagagcaagccccgctatcacaagcgc
accagctctgctgtctggaactcaccgcccctgcagggcgccagggtccccagcagcctg
gcctacagcctgaagaagcactga

>gi568815587f:62142308_62343478|GENSCAN_predicted_peptide_2|313_aa
MDKFLDTYTLPSLNQEEVESLNRPITSSEIEAAINSLPTKKSSGPDGFTAEFYQRDMNEA
GNHHPQQTNTGTENQTLHVLTHKWEMNKENTWTQRGEHHTLGPVGRRPTSTDSSSLVAES
LAGIRKMATNFSVYEKIWFDKFKYDIAERRLYEQMNGPVASTSRQKNGASVILHDIARAR
ENIQKSLARSSGPRVSSGPNGEHSELVVLIASLEVENQRLSSVVQELQQAMSRLEAQLNV
LEKSSAGHRATVPQTQHVSPIGALAKKPTTPAEDDKGNDIDLFGSNNEEEDEEAAQLREE
WLPFPPVIRKALL

>gi568815587f:62142308_62343478|GENSCAN_predicted_CDS_2|942_bp
atggataaattcctggacacatacaccctcccaagtctaaaccaggaagaagtcgaatcc
ctaaatagaccaataacaagttctgaaattgaggcagcaattaatagcctaccaaccaaa
aaaagttcaggaccagatggattcacagccgaattctaccagagggacatgaatgaagct
ggaaaccatcatcctcagcaaactaacacaggaacagaaaaccaaacactgcacgttctc
actcataagtgggagatgaacaaggagaacacatggacacagcgaggggaacatcacaca
ctggggcctgtcggcaggcgtcccacgtccaccgattcctcctccctcgttgctgagtcc
ttggctggcatcagaaaaatggctacaaacttctcagtatatgagaagatctggtttgac
aagttcaaatatgacattgcagaaaggagattgtacgagcaaatgaacgggcctgtggcc
agcacctcccgccagaagaatggcgccagcgtgatcctccatgacattgcgagagccaga
gagaacatccagaaatccctggccagaagctcaggccccagggtctccagcggccccaac
ggagaacacagcgagcttgttgtcctgatcgccagtctggaagtggagaaccagaggctg
agcagcgtggtgcaggagctgcagcaggccatgtccaggctggaggcccagctgaacgtg
ctggagaagagctctgctggccaccgggccacagtccctcagacccagcacgtgtctccc
attggagccctggccaagaagccaaccacaccagcagaggatgacaagggcaatgacatt
gacctttttggcagcaacaatgaggaggaggacgaggaggcagcacagctgcgggaggaa
tggctgccatttcccccagtaattagaaaagccttattgtga

>gi568815587f:62142308_62343478|GENSCAN_predicted_peptide_3|141_aa
MRLSVCLLLLTLALCCYRANAVVCQALGSEITGFLLAGKPVFKFQLAKFKAPLEAVAAKM
EVKKCVDTMAYEKRVLITKTLVTYLDAVSPECAEDMGNVSLDITIHSSKSQLKQHLLLQA
ALGGLQATAPGQAIYDSIQLL

>gi568815587f:62142308_62343478|GENSCAN_predicted_CDS_3|426_bp
atgaggctgtcggtgtgtctcctgctgctcacgctggccctttgctgctaccgggcaaat
gcagtggtctgccaagctcttggttctgaaatcacaggcttcttattagctggaaaacct
gtgttcaagttccaacttgccaaatttaaggcacctctggaagctgttgcagccaagatg
gaagtgaagaaatgcgtggatacgatggcctatgagaaaagagtgctaattacaaaaaca
ttggtcacctacctggatgccgtgtccccagagtgtgctgaggacatggggaatgtgtcc
ttggacatcaccatccactcatccaagtctcagctgaaacagcacctgctcctacaggct
gccttggggggcttacaggccactgcccctgggcaggccatctatgacagcattcagctg
ttgtga

>gi568815587f:62142308_62343478|GENSCAN_predicted_peptide_4|199_aa
MKLLMVLMLAALLLHCYADSGCKLLEDMVEKTINSDISIPEYKELLQEFIDSDAAAEAMG
KFKQCFLNQSHRTLKNFGLMMMNQRAPENILKRETFKLQIIMQQRFQPIPGEDTAPMPSR
SYSTSTRQNRCTPAVCKHNIGSFVGCRVESLMKSTSLNEDLVHRDYGPADTMLPVPVSES
IILWVLNILTIVTVIPEIG

>gi568815587f:62142308_62343478|GENSCAN_predicted_CDS_4|600_bp
atgaagctgctgatggtcctcatgctggcggccctcctcctgcactgctatgcagattct
ggctgcaaactcctggaggacatggttgaaaagaccatcaattccgacatatctatacct
gaatacaaagagcttcttcaagagttcatagacagtgatgccgctgcagaggctatgggg
aaattcaagcagtgtttcctcaaccagtcacatagaactctgaaaaactttggactgatg
atgatgaatcagagggcccctgaaaacatcttgaaaagagagaccttcaagcttcagata
atcatgcaacaaaggttccagccaattccaggtgaagacaccgccccaatgccatcaaga
agctactccacctccactagacagaacaggtgcacacctgctgtgtgcaagcataacatt
gggtcctttgttggctgcagagttgagtcactgatgaagtccacctctctgaatgaggat
ttggttcatagggattatggaccagcagatacgatgctgccagtccctgtctcagaatcc
attattctttgggtattgaatatcctcaccattgtcactgttatccctgaaattgggtga

>gi568815587f:62142308_62343478|GENSCAN_predicted_peptide_5|495_aa
MKLSVCLLLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAKFDAPPEAVAAKL
GVKRCTDQMSLQKRSLIAEVLEPGDSKPWDSPGNNLLLLSPTLVTCFHEDPGPHSRITPG
LLAWQEKAAPSPAWVLLYELFLLYILLIHARSNRDWGCVKWRLNRDFEDMNKKERDREEK
EGEQVEKEYKKEEEKQEDSTYRLAVFPLGHAPVYWSHASGFLDPCHPRLNTDSSSLTMKL
LMVLMLAALSQHCYAGSGCPLLENVISKTINPQVSKTEYKELLQEFIDDNATTNAIDELK
ECFLNQTDETLSNVEVFMRKQERSKIDTLTSQLKELEKQEQTHSKASRRQETTKIRAELK
EIETQKTLQKINKSRSWFFEKINKIDRPLERLIKKKREKNQIYAIKNDKGDITIEPTEIQ
TTIREYYKHLYSNKPENLEDMDKFLDTYTLPRLNQEEVESLKRPITGCEIEAIINSLPTK
KSPGPDGFTAEFYQR

>gi568815587f:62142308_62343478|GENSCAN_predicted_CDS_5|1488_bp
atgaagctgtcggtgtgtctcctgctggtcacgctggccctctgctgctaccaggccaat
gccgagttctgcccagctcttgtttctgagctgttagacttcttcttcattagtgaacct
ctgttcaagttaagtcttgccaaatttgatgcccctccggaagctgttgcagccaagtta
ggagtgaagagatgcacggatcagatgtcccttcagaaacgaagcctcattgcggaagtc
ctggaaccaggagactccaagccctgggacagcccaggcaataacctcttgctgctctct
ccaaccctcgtcacttgcttccatgaggatcctgggcctcattcccggatcaccccaggg
ctattggcctggcaagaaaaggctgctccatcaccggcatgggtgctcctctatgaactc
ttcttactatacatcctcctcattcatgccaggtccaacagggactggggctgtgtcaag
tggcgcctgaacagggacttcgaggacatgaacaaaaaagaaagagacagagaagaaaag
gaaggggagcaagtggagaaggaatacaagaaagaggaagagaagcaggaagattctaca
tacaggctggctgtgtttcccctggggcatgctcctgtttactggtcccatgccagcggc
ttccttgatccttgccacccgcgactgaacaccgacagcagcagcctcaccatgaagttg
ctgatggtcctcatgctggcggccctctcccagcactgctacgcaggctctggctgcccc
ttattggagaatgtgatttccaagacaatcaatccacaagtgtctaagactgaatacaaa
gaacttcttcaagagttcatagacgacaatgccactacaaatgccatagatgaattgaag
gaatgttttcttaaccaaacggatgaaactctgagcaatgttgaggtgtttatgagaaag
caggaaagatctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagag
caaacacattcaaaagctagcagaaggcaagaaacaactaagatcagagcagaactgaag
gaaatagagacacaaaaaacccttcaaaaaatcaataaatccaggagctggttttttgaa
aagatcaacaaaatcgatagaccgctagaaagactaataaagaagaaaagagagaagaat
caaatatacgcaataaaaaatgataaaggggatatcaccatcgagcccacagaaatacaa
actaccatcagagaatactataaacacctctactcaaataaaccagaaaatctagaagac
atggataaattcctggacacatacaccctcccaagactaaaccaggaagaagttgaatct
ctgaagagaccaataacaggctgtgaaattgaggcaataattaatagcttgccaaccaaa
aaaagtccaggaccagatggattcacagctgaattctaccagaggtaa

>gi568815587f:62142308_62343478|GENSCAN_predicted_peptide_6|415_aa
MSELPFTIASKRVKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPSSWVGRINIV
KMAILPKVIYRFNAIPIKLPMTFFTQLEKTTLNFIWNQKRACIAKSILSQKNKAGGITLP
DFKLYYKATVTKTAWYWYQNRDIDQWNRTQPSEIIPHIYNYLIFDKPDKNKQWGKDSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTVKTLEENLGNTIQDIGMGKD
FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFVIYSSDKGLISRI
YSELQQICKKKTNNPINKWAKDMNRHFSKEDIYAANRHMKKCSSSLAIREMQIKTKMRYH
PTPVRMAIIKKSGNNRCSSKLVISLAKKTSRMSINEHMNTKKADYEMLAGLGRRF

>gi568815587f:62142308_62343478|GENSCAN_predicted_CDS_6|1248_bp
atgagtgaactcccattcacaattgcttcaaagagagtaaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattccatcctcatgggtaggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctacca
atgactttcttcacacaattggaaaaaactactttaaatttcatttggaaccaaaaaaga
gcctgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacct
gacttcaaactatactacaaggctacggtaaccaaaacagcatggtactggtaccaaaac
agagatatagaccaatggaacagaacacagccctcagaaataataccacatatctacaac
tatctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaat
aaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaact
gtaaaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacct
acagagtgggagaaaatttttgtaatctactcatctgacaaagggctaatatccagaatc
tacagtgaactccaacaaatttgcaagaagaaaacaaacaaccccatcaacaagtgggca
aaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaa
aaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaaaatgagataccat
cccacaccagttagaatggccatcattaaaaagtcaggaaacaacagatgttcttcaaaa
ttagtaatatcattagcaaagaagacatccaggatgtcaatcaatgagcacatgaacacc
aagaaagctgactatgagatgctggcaggtctaggaaggcgtttctag

>gi568815587f:62142308_62343478|GENSCAN_predicted_peptide_7|81_aa
MRLSVCLLMVSLALCCYQAHALVCPAVASEITVFLFLSDAAVNLQVAKLNPPPEALAAKL
EVKHCTDQISFKKRLSLKKSW

>gi568815587f:62142308_62343478|GENSCAN_predicted_CDS_7|246_bp
atgaggctgtcagtgtgtctcctgatggtctcgctggccctttgctgctaccaggcccat
gctcttgtctgcccagctgttgcttctgagatcacagtcttcttattcttaagtgacgct
gcggtaaacctccaagttgccaaacttaatccacctccagaagctcttgcagccaagttg
gaagtgaagcactgcaccgatcagatatcttttaagaaacgactctcattgaaaaagtcc
tggtaa

>gi568815587f:62142308_62343478|GENSCAN_predicted_peptide_8|123_aa
MAEQEQLQSAAPSEINTEDRSTRQKVNKDIQDLNAALDQVDLTDIYRTLHPKSTEYTFFS
APQCTYSKIDHIIGSKTLVSKCKRMEIITNSLSDHSAIKLELTIKKLTQNLHNYMETGQP
APE

>gi568815587f:62142308_62343478|GENSCAN_predicted_CDS_8|372_bp
atggctgaacaggaacagctccagtctgcagctcccagtgagatcaacacagaagacaga
tcaacaagacagaaggttaacaaggatattcaggacttgaacgcagctctggaccaagtg
gacctaacagacatctacagaactctccaccccaaatcaacagaatatacattcttctca
gcaccacaatgcacttattctaaaattgaccacataattggaagtaaaacactcgtcagc
aaatgcaaaagaatggaaatcataacaaacagtctctcagatcacagtgcgatcaaatta
gaactcacgattaagaaactcactcaaaacctgcacaactacatggaaactggacaacct
gctcctgaatga

>gi568815587f:62142308_62343478|GENSCAN_predicted_peptide_9|137_aa
MGSEQKSVSTGDMQEKVNIEAEHNTSSREGAQDNLEEDISWWLERLLQGLGHISGQHLVA
VEEDARKDEEEEDVKLLSVSGKRSAPGGGSKVPQKKVKLAADEDDDYEDDDDDEDDDDDD
DFDDKETKEKAPVKQSI

>gi568815587f:62142308_62343478|GENSCAN_predicted_CDS_9|414_bp
atgggatctgaacaaaagtctgtgtccacaggagacatgcaggagaaagtgaatatcgag
gcagaacacaacacgagcagcagagaaggagcccaggataacctggaggaagacatcagc
tggtggctggaaaggctgctccaggggctagggcatattagtggacagcacttagtagct
gtggaggaagatgcaagaaaagatgaagaggaggaggatgtgaaactcttaagtgtatct
ggaaagcgatcagcccctggaggtggtagcaaggttccacagaaaaaagtaaaacttgct
gccgatgaagatgatgattatgaagatgatgatgatgatgaagatgatgatgatgatgat
gattttgatgataaggaaaccaaagaaaaagcaccagtgaagcaatctatatga

>gi568815587f:62142308_62343478|GENSCAN_predicted_peptide_10|102_aa
MNPIVVVHGGGAGPISKDRKERVHQGMVRAATVGYGILREGGSAVDAVEGAVVALEDDPE
FNAEAFLLNVCPLIFQMSSIPHIEEEKSRAEKRESKDYGGKX

>gi568815587f:62142308_62343478|GENSCAN_predicted_CDS_10|306_bp
atgaatcccatcgtagtggtccacggcggcggagccggtcccatctccaaggatcggaag
gagcgagtgcaccagggcatggtcagagccgccaccgtgggctacggcatcctccgggag
ggcgggagcgccgtggatgccgtagagggagctgtcgtcgccctggaagacgatcccgag
ttcaacgcagaggccttccttctcaacgtctgccctctcatctttcaaatgtcctctatt
ccgcatattgaggaagaaaagagtagagctgaaaagagggaaagcaaagattatgggggg
aaagnn