GENSCAN 1.0	Date run:  7-Nov-116	Time: 20:17:25

Sequence gi568815588r:80238467_80452601 : 214135 bp : 44.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    369    364    6                               1.05
 1.04 Term -   9154   8753  402  1  0   47   36   568 0.061  42.65
 1.03 Intr -  14133  13927  207  0  0  -50   80   247 0.723   9.37
 1.02 Intr -  14592  14338  255  0  0  -44   53   465 0.520  27.44
 1.01 Init -  14917  14849   69  1  0   56   75   104 0.870   6.95
 1.00 Prom -  15628  15589   40                              -1.46

 2.10 PlyA -  19905  19900    6                               1.05
 2.09 Term -  35417  35315  103  1  1   38   43    90 0.379  -2.75
 2.08 Intr -  36187  36054  134  1  2   18  103   251 0.733  19.04
 2.07 Intr -  36733  36551  183  1  0  125  115   216 0.999  27.98
 2.06 Intr -  38128  37910  219  1  0   71   57   488 0.995  42.50
 2.05 Intr -  41850  41707  144  0  0   78   99   160 0.999  16.58
 2.04 Intr -  42347  42214  134  0  2   89   70   150 0.623  13.66
 2.03 Intr -  45572  45450  123  0  0  116   72   218 0.989  23.56
 2.02 Intr -  47123  47046   78  0  0   91   83    91 0.994   8.42
 2.01 Init -  50957  50867   91  2  1   69  114    53 0.984   6.65
 2.00 Prom -  61275  61236   40                              -4.26

 3.00 Prom +  62274  62313   40                              -4.46
 3.01 Sngl +  66603  66884  282  2  0   88   37   153 0.785   5.69
 3.02 PlyA +  67486  67491    6                               1.05

 4.00 Prom +  68012  68051   40                              -6.36
 4.01 Sngl +  69460  70845 1386  0  0   42   32   458 0.887  31.69
 4.02 PlyA +  70954  70959    6                              -0.45

 5.00 Prom +  71237  71276   40                              -2.46
 5.01 Init +  71674  71806  133  0  1   78   47    90 0.551   4.20
 5.02 Term +  77225  77310   86  0  2  131   55    99 0.992   8.72
 5.03 PlyA +  77720  77725    6                               1.05

 6.00 Prom +  87166  87205   40                              -3.16
 6.01 Init +  89837  89839    3  1  0   93   95     0 0.190   1.20
 6.02 Intr + 112382 112588  207  1  0   73   34    83 0.108   0.67
 6.03 Intr + 118131 118235  105  2  0   81   78    84 0.190   7.11
 6.04 Intr + 123969 124124  156  2  0   95   85    72 0.214   7.81
 6.05 Intr + 124485 124607  123  2  0   96   97   146 0.999  17.08
 6.06 Term + 128222 128485  264  1  0   93   39   194 0.857  10.51
 6.07 PlyA + 128659 128664    6                               1.05

 7.06 PlyA - 129753 129748    6                               1.05
 7.05 Term - 141634 141380  255  1  0   29   42   161 0.050   1.19
 7.04 Intr - 153370 153325   46  0  1   95   82     0 0.343  -1.49
 7.03 Intr - 153485 153397   89  2  2   69   77   106 0.671   6.37
 7.02 Intr - 158745 158565  181  2  1   71   34   123 0.931   5.07
 7.01 Init - 162329 162292   38  2  2   82   73    46 0.636   1.98
 7.00 Prom - 163710 163671   40                              -3.26

 8.00 Prom + 170736 170775   40                              -6.16
 8.01 Init + 182035 182179  145  0  1   95  110   303 0.998  31.48
 8.02 Intr + 183951 184042   92  1  2   78  105    16 0.958   2.01
 8.03 Intr + 187400 187540  141  1  0  104   93   126 0.992  15.25
 8.04 Intr + 188866 189030  165  0  0   69  109   136 0.998  13.96
 8.05 Term + 193520 193633  114  1  0  128   38    69 0.575   4.47
 8.06 PlyA + 194508 194513    6                               1.05

 9.03 PlyA - 196265 196260    6                               1.05
 9.02 Term - 206053 206002   52  0  1  104   49    13 0.114  -4.10
 9.01 Init - 213407 213193  215  2  2   59  110   124 0.882   9.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:80238467_80452601|GENSCAN_predicted_peptide_1|310_aa
MEIIEVTEEIHVKVVIEGPDATQEVDEVPEDQQLQEVDEVPEDLQLQGVDEVPEDQQLQE
VNEVPEDQQLQKVDEVPEDHQLQEVDEVPEDHQLREVDEVPEDRQLQEELDKAPENNRVE
EVVKFSGDSLVQEVAEFPEDSRVEVVEFPEDSPVEEFVEVPENLQMEGVFEFPDNTQCSA
LRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNI
RRNDFQLIGIQDGYLSLLQDSGEVPEDLRLPEGDLGKETEQKYDCGEEILITVLSAMTEE
AAVAIKAMAK

>gi568815588r:80238467_80452601|GENSCAN_predicted_CDS_1|933_bp
atggagattattgaagtaaccgaggagattcatgtgaaggtggttattgaggggccagac
gccacccaggaggtggatgaggtcccagaggaccaacagctgcaggaggtggatgaggtc
ccagaagacctacagctgcagggtgtggatgaagtcccagaggaccaacagctgcaggag
gtgaatgaggtcccggaagaccaacagctgcaaaaggtggatgaggtcccggaggaccac
cagctgcaggaggtggatgaggttccggaggaccaccagcttcgagaggtggatgaggtc
ccggaggaccgacagctgcaggaggagctggataaggccccagagaacaatcgagtggag
gaggtggttaagttttcaggggactctctagtgcaggaggtggctgagttcccagaggac
agtcgagtggaggtggttgaattcccagaggactctccagtggaggagtttgttgaggtc
ccagaaaaccttcagatggagggagtgtttgagttcccagacaacacccagtgctcagca
ttacgtaagaatggctttgtggtgctcaaaggctggccatgtaagatcgtggagatgtct
gcttcgaagactggcaagcacggccacgccaaggtccatctggttggtattgacatcttt
actgggaagaaatatgaagatatctgcccgtcaactcataatatggatgtccccaacatc
agaaggaatgacttccagctgattggcatccaggatgggtacctatcactgctccaggac
agcggggaggtaccagaggaccttcgtctccctgagggagaccttggcaaggagactgag
cagaagtacgactgtggagaagagatcctgatcacggtgctgtctgccatgacagaggag
gcagctgttgcaatcaaggccatggcaaaataa

>gi568815588r:80238467_80452601|GENSCAN_predicted_peptide_2|402_aa
MNGPVDGLCDHSLSEGVFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVC
KTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGSLCFRLGFDFKTCNVLVALEQQ
SPDIAQCVHLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLL
PWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPA
KYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRS
AAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVHKNF
DLRPGVIVRDLDLKKPIYQKTACYGHFGRSEFPWEVPRKLVF

>gi568815588r:80238467_80452601|GENSCAN_predicted_CDS_2|1209_bp
atgaatggaccggtggatggcttgtgtgaccactctctaagtgaaggagtcttcatgttc
acatcggagtctgtgggagagggacacccggataagatctgtgaccagatcagtgatgca
gtgctggatgcccatctcaagcaagaccccaatgccaaggtggcctgtgagacagtgtgc
aagaccggcatggtgctgctgtgtggtgagatcacctcaatggccatggtggactaccag
cgggtggtgagggacaccatcaagcacatcggctacgatgactcagccaagggctcactt
tgcttccgcctaggctttgacttcaagacttgcaacgtgctggtggctttggagcagcaa
tccccagatattgcccagtgcgtccatctggacagaaatgaggaggatgtgggggcagga
gatcagggtttgatgttcggctatgctaccgacgagacagaggagtgcatgcccctcacc
atcatccttgctcacaagctcaacgcccggatggcagacctcaggcgctccggcctcctc
ccctggctgcggcctgactctaagactcaggtgacagttcagtacatgcaggacaatggc
gcagtcatccctgtgcgcatccacaccatcgtcatctctgtgcagcacaacgaagacatc
acgctggaggagatgcgcagggccctgaaggagcaagtcatcagggccgtggtgccggcc
aagtacctggacgaagacaccgtctaccacctgcagcccagtgggcggtttgtcatcgga
ggtccccagggggatgcgggtgtcactggccgtaagattattgtggacacctatggcggc
tggggggctcatggtggtggggccttctctgggaaggactacaccaaggtagaccgctca
gctgcatatgctgcccgctgggtggccaagtctctggtgaaagcagggctctgccggaga
gtgcttgtccaggtttcctatgccattggtgtggccgagccgctgtccatttccatcttc
acctacggaacctctcagaagacagagcgagagctgctggatgtggtgcataagaacttc
gacctccggccgggcgtcattgtcagggatttggacttgaagaagcccatctaccagaag
acagcatgctacggccatttcggaagaagcgagttcccatgggaggttcccaggaagctt
gtattttag

>gi568815588r:80238467_80452601|GENSCAN_predicted_peptide_3|93_aa
MGRNQSRKAENSKKQSAPSSPKDRSSSPAMEQSRTENDFDELTEVGFRKLVINFFELKED
VQTHRKEAKNFEKRLNEWLTKINSVEKTLNDLM

>gi568815588r:80238467_80452601|GENSCAN_predicted_CDS_3|282_bp
atggggagaaaccagagcagaaaagctgaaaattctaaaaaacagagcgccccttcttct
ccaaaggatcgcagctcctcgccagcaatggaacaaagcaggacagagaatgattttgat
gagttgacagaagtaggcttcagaaagttggtaataaacttctttgagctaaaggaggat
gttcaaacccatcgcaaggaagctaaaaactttgaaaaaagattaaatgaatggctaact
aaaataaacagtgtagagaagaccttaaatgacctgatgtag

>gi568815588r:80238467_80452601|GENSCAN_predicted_peptide_4|461_aa
MIISIDAEKAFNKIQQPFIIKVFNKLGIDGTYLKVIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNITLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIAYLENPVVS
AQNLLKLISNFSKVSAYKINVQKSQAFLDTNNRQTESQIMSELPLTIATKIIKYLGIQLT
KDVKDLFKENYKPLFNEIKEDTNKWKNIPCSWTGKINIMKTAILPKVIYRFSAITIKLPM
TFFTELEKTTLKFIWSQKRARIAKTILSQKNKAGGIMLPDFKLYYKATVTQTAWYWYQNR
DIDQWNRTEASEITPHIYNPLIFDKPDKNKKWGKDSLFNKWCWENWLAICRKLKLDPFLT
PYTKINSRWIKDLNVRPKTIKALEENLGKTIQDIDMGKDFMTKTSKAMATKAKIDKWDLI
KLKSFCTAKETIIRVNRHPTEWDKSFAIYSSDKRLISRIYK

>gi568815588r:80238467_80452601|GENSCAN_predicted_CDS_4|1386_bp
atgattatctcaatagatgcagaaaaggccttcaacaaaattcaacagcccttcataata
aaagttttcaataaactaggtattgatgggacatatctcaaagtaataagagctatttat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacaaggatgccctctctcaccactcctattcaacataacgttggaagtt
ctggccagggcaatcaggcaggagaaagaaataaagggtattcagttaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgcgtatttagaaaaccccgtcgtctca
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcagcatacaaaatcaat
gtgcaaaaatcacaggcattcttagacaccaataacagacaaacagagagccaaatcatg
agtgaactcccactcacaattgctacaaagataataaaatacctaggaatccaacttaca
aaggatgtgaaggacctcttcaaggagaactacaaaccactgttcaatgaaataaaagag
gacacaaacaaatggaagaacattccatgctcatggacaggaaaaatcaatatcatgaaa
acggccatactgcccaaggtaatttatagattcagtgccatcaccatcaaactaccaatg
acattcttcacagaattggaaaaaactactttaaagttcatatggagccaaaaaagagcc
cgcattgccaagacaatcctaagccaaaagaacaaagctggaggcatcatgctacctgac
ttcaaactatactacaaggctacagtaacccaaacagcatggtactggtaccaaaacaga
gatatagaccaatggaacagaacagaggcctcagaaataacaccacacatctacaaccct
ctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttacacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccata
aaagccctagaagaaaacctaggcaaaaccattcaggacatagacatgggcaaggacttc
atgactaaaacatcaaaagcaatggcaacaaaagccaaaatagacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactatcatcagagtgaacaggcatcctaca
gaatgggacaaaagttttgcaatctactcatctgacaaaaggctaatatccagaatctac
aaataa

>gi568815588r:80238467_80452601|GENSCAN_predicted_peptide_5|72_aa
MEYYAAIKKDEFMSFVGTRMKLETIILSKLSQGQKNKHHTSSLIGGLLRSPSLPNEGCSL
PQGAQSHQLPKG

>gi568815588r:80238467_80452601|GENSCAN_predicted_CDS_5|219_bp
atggaatactatgcagccataaagaaggatgagttcatgtcctttgtagggacacggatg
aagctggaaaccatcattctgagcaaactatcacaaggacagaaaaacaaacaccatacg
tcctcactcataggtgggctcctgcgcagcccgagcctccccaacgagggctgctccctg
ccccagggcgcccagtcccatcaactgcccaagggctga

>gi568815588r:80238467_80452601|GENSCAN_predicted_peptide_6|285_aa
MLVLHDPSLQQFPYQYLQLPNHATPILLQLKGLPAPLLHSDIWAQVKRITSSHNQIKWHD
YQYLIFNCYQVSPARRPRPNGQNRLCPPDPAKLGEQIPKTVRAFPAARMETNYLKRCFGN
CLAQALAEVAKVRPSDPIEYLAHWLYHYRKTAKAKEENREKKIHLQEEYDSSLKEMEMTE
MLKQEEYQIQQNCEKCHKELTSETVSTKKTIFMQEDTNPLEKEALKQEFLPGTSSLIPGM
PQQVPPSESAGQIDQNFKMPQEINYKEAFQHEVAHEMPPGSKSPF

>gi568815588r:80238467_80452601|GENSCAN_predicted_CDS_6|858_bp
atgcttgtactccatgacccatcccttcaacaattcccttaccaatatcttcagctccct
aatcatgctaccccaatcctgcttcaattaaaaggtctgcctgctccacttcttcactca
gacatctgggcccaagtgaagagaatcacatcatcacataaccaaatcaaatggcacgat
tatcagtacttgatcttcaactgctaccaagtgagtcctgctcgacgcccaaggcccaac
ggtcagaaccgcctctgcccgccggacccagcgaagctaggggaacaaatcccaaaaaca
gttcgggcctttccggctgccaggatggaaactaactacctgaagaggtgctttggaaat
tgcctggcccaggcactggcagaggtggcgaaggttcggcccagtgacccaatagaatac
ctggctcactggctttatcattacaggaaaacagcaaaagcaaaagaagagaatagggaa
aagaagatccacctgcaggaggaatatgacagtagcctcaaggaaatggaaatgacagaa
atgctgaaacaggaagagtatcagattcaacagaactgtgaaaagtgtcacaaggaactg
acttctgaaactgtttccacgaagaagaccatattcatgcaggaggacacaaaccccctt
gagaaggaggccttgaagcaggaattcctgccaggtacttccagtctgattccaggaatg
cctcaacaggttcctccttcagagtctgctggccagattgaccagaacttcaaaatgcca
caagaaataaattacaaggaggcttttcagcatgaagttgctcatgaaatgcctcctggc
tccaaatctcctttttag

>gi568815588r:80238467_80452601|GENSCAN_predicted_peptide_7|202_aa
MRHKAEHTINKLSYMGIGNFYSSLAIPKGFTLSSSDSLFRESEQEGTADIKCASIPVLAF
LLTVSVSDYVLDIIAQRLVQGHHSFPQGDLIRSQMLIVLQQLWERRYPRPYVAPKQSQIF
NVDEIAFYKKKMPSKTFMATEEKSMPGFKASKDRLTLLLESNASGDVKLKPTLIYHSENP
RGLKNDARSTLPVFISGTTKPG

>gi568815588r:80238467_80452601|GENSCAN_predicted_CDS_7|609_bp
atgaggcacaaagcagaacatactatcaacaagctgagctatatgggaataggaaacttt
tactcctcactcgctattcccaagggcttcactctcagctcctcagattccctgttcagg
gaatctgaacaggaaggaacagctgacatcaaatgtgcctctatcccagttctggccttt
ctcctgactgtttctgtgtctgactatgtgcttgacattatagcacaaagacttgtccaa
ggtcatcattcatttcctcaaggtgacctgattcgcagccagatgctcatcgtgctccag
cagctgtgggaaaggaggtacccaaggccctatgttgctcccaaacaaagccagattttc
aatgtagatgaaatagccttctataagaagaagatgccgtccaagactttcatggctacg
gaggagaagtcaatgcctggcttcaaagcttcaaaggacaggctgactctcttgttagag
tctaatgcatctggtgatgttaagttgaagccaacactcatttatcattctgaaaatcct
aggggccttaagaatgatgctagatctactctgcctgtgtttatcagtggaacaacaaag
cctggatag

>gi568815588r:80238467_80452601|GENSCAN_predicted_peptide_8|218_aa
MGMWSIGAGALGAAALALLLANTDVFLSKPQKAALEYLEDIDLKTLEKEPRTFKAKELWE
KNGAVIMAVRRPGCFLCREEAADLSSLKSMLDQLGVPLYAVVKEHIRTEVKDFQPYFKGE
IFLDEKKKFYGPQRRKMMFMGFIRLGVWYNFFRAWNGGFSGNLEGEGFILGGVFVVGSGK
QGILLEHREKEFGDKVNLLSVLEAAKMIKPQTLASEKK

>gi568815588r:80238467_80452601|GENSCAN_predicted_CDS_8|657_bp
atggggatgtggtccattggtgcaggagccctgggggctgctgccttggcattgctgctt
gccaacacagacgtgtttctgtccaagccccagaaagcggccctggagtacctggaggat
atagacctgaaaacactggagaaggaaccaaggactttcaaagcaaaggagctatgggaa
aaaaatggagctgtgattatggccgtgcggaggccaggctgtttcctctgtcgagaggaa
gctgcggatctgtcctccctgaaaagcatgttggaccagctgggcgtccccctctatgca
gtggtaaaggagcacatcaggactgaagtgaaggatttccagccttatttcaaaggagaa
atcttcctggatgaaaagaaaaagttctatggtccacaaaggcggaagatgatgtttatg
ggatttatccgtctgggagtgtggtacaacttcttccgagcctggaacggaggcttctct
ggaaacctggaaggagaaggcttcatccttgggggagttttcgtggtgggatcaggaaag
cagggcattcttcttgagcaccgagaaaaagaatttggagacaaagtaaacctactttct
gttctggaagctgctaagatgatcaaaccacagactttggcctcagagaaaaaatga

>gi568815588r:80238467_80452601|GENSCAN_predicted_peptide_9|88_aa
MLKATGSEKDTQGEGVDAEEERVQEGPRGTKAGKKTEKETGEAEGESGVSQRLRKCFQKA
VVSCVRHCLEIRILCAPPPPIFVARSLS

>gi568815588r:80238467_80452601|GENSCAN_predicted_CDS_9|267_bp
atgctcaaggccacgggatctgagaaggacacacagggtgagggagtagatgcagaagag
gagagagttcaggagggacccaggggaaccaaagcaggcaagaagactgaaaaagagact
ggggaggcagaaggagaatcaggagtatcccagagactgagaaaatgtttccagaaagca
gttgtcagctgtgttagacactgcttagagatcagaatcctctgtgcaccgcccccaccc
atctttgtggccagatccctctcctga