GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:26:07

Sequence gi568815588f:72123915_72333113 : 209199 bp : 46.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -   9267   9143  125  2  2   73  115    47 0.080   6.13
 1.08 Intr -  29074  28955  120  0  0   86   76   102 0.657   8.41
 1.07 Intr -  37760  37624  137  2  2   72   78    99 0.643   6.67
 1.06 Intr -  73075  72897  179  2  2  106  115   171 0.999  21.24
 1.05 Intr -  79610  79513   98  1  2   90   77     8 0.421  -0.45
 1.04 Intr -  86917  86818  100  2  1   55   78   123 0.555   7.17
 1.03 Intr -  89417  89273  145  2  1   34   84   152 0.043   9.26
 1.02 Intr - 100110  99934  177  0  0   32   44   117 0.006   1.82
 1.01 Init - 102717 102676   42  0  0   62   66    38 0.008  -2.58
 1.00 Prom - 103205 103166   40                              -4.76

 2.00 Prom + 103256 103295   40                              -5.16
 2.01 Init + 104199 104247   49  2  1   67   70    -3 0.180  -3.09
 2.02 Intr + 106452 106526   75  1  0  101  103    33 0.972   5.59
 2.03 Term + 109087 109202  116  2  2   96   43   175 0.966  12.53
 2.04 PlyA + 109810 109815    6                               1.05

 3.00 Prom + 113479 113518   40                              -2.96
 3.01 Init + 119826 120005  180  2  0   84   32    75 0.037   0.68
 3.02 Intr + 136893 137027  135  2  0  157   47    13 0.060   4.86
 3.03 Intr + 150243 150507  265  2  1  112  105   298 0.994  30.99
 3.04 Term + 150781 151274  494  2  2  112   43   799 0.999  72.57
 3.05 PlyA + 152101 152106    6                               1.05

 4.00 Prom + 154922 154961   40                              -4.76
 4.01 Init + 156769 156846   78  0  0   96   73   107 0.563  11.07
 4.02 Intr + 161820 161874   55  2  1   48  103    31 0.353  -0.85
 4.03 Intr + 167977 168045   69  2  0  101   94    60 0.707   7.05
 4.04 Intr + 170473 170510   38  2  2  118   53     3 0.421  -2.22
 4.05 Term + 171986 172276  291  1  0  115   47   156 0.891   9.54
 4.06 PlyA + 173084 173089    6                              -0.45

 5.02 PlyA - 173179 173174    6                               1.05
 5.01 Sngl - 176957 176442  516  2  0   88   43   235 0.934  13.11
 5.00 Prom - 179305 179266   40                              -6.76

 6.00 Prom + 183324 183363   40                              -4.16
 6.01 Init + 185361 185452   92  2  2   65  105    22 0.514   1.57
 6.02 Intr + 185930 186144  215  2  2   81   63    43 0.215  -0.54
 6.03 Intr + 195625 195677   53  2  2   98   47    42 0.126  -0.27
 6.04 Intr + 197857 197879   23  0  2  138   98    -2 0.538   2.14
 6.05 Intr + 198280 198380  101  1  2  110   83    26 0.557   4.05
 6.06 Intr + 200011 200122  112  2  1   85   69     4 0.161  -2.36
 6.07 Term + 202029 202539  511  0  1    6   33   338 0.481  13.95
 6.08 PlyA + 202842 202847    6                               1.05

 7.00 Prom + 203647 203686   40                              -7.86
 7.01 Init + 204165 204312  148  2  1   94   45   114 0.891   6.41
 7.02 Term + 204522 204670  149  1  2   91   45   131 0.992   7.16
 7.03 PlyA + 208927 208932    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  89384  89273  112  2  1   56   84   115 0.902   8.27
S.002 Sngl +  91728  91973  246  2  0   53   48   197 0.829   7.28
S.003 Term + 136893 136960   68  1  2  157   49    29 0.811   4.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:72123915_72333113|GENSCAN_predicted_peptide_1|375_aa
MRSQLTAASTSQAQVKRAFRGGARSETLKPDPVTELPLTPPAEEDDDEAAISSLAEFLLH
YRERKTAIGKFMEGIIGISFGESVMEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFY
QGSMECADEPCDAYEVEQTPQGFRSTLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPK
PGQDGEIVITGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLRFQEE
VLAKCSMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKP
LEVEMAGIEYMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVKEWNSVKL
HATVMNTLFRKDPNX

>gi568815588f:72123915_72333113|GENSCAN_predicted_CDS_1|1125_bp
atgcgatcacagctcactgcagcctccacctcccaggctcaggtgaaaagggctttccgt
ggtggggcaaggtctgagacactgaaaccagatccagtgacagaacttccactgacccca
ccagctgaggaggatgatgatgaagcagccatttcctctctagcagagttcttacttcac
tacagagaaagaaaaacagcaattggcaagtttatggaaggcataattggaatatcattt
ggagaaagtgtcatggaagttctgcgtccacagcttataagaattgatggccggaattac
aggaagaatccagtccaagaacagacctatcaacatgaagaagatgaagaggacttctat
caaggctccatggagtgtgctgatgagccctgtgatgcctacgaggtggagcagacccca
caaggattccggtctactttgagggcccccagcttgctctataagcatatagttggaaag
agaggggacactaggaagaaaatagaaatggagaccaaaacttctattagcattcctaaa
cctggacaagacggggaaattgtaatcactggccagcatcgaaatggtgtaatttcagcc
cgaacacggattgatgttcttttggacacttttcgaagaaagcagcccttcactcacttc
cttgcctttttcctcaatgaagttgaggttcaggaaggattcctgagattccaggaggaa
gtactggcgaagtgctccatggatcatggggttgacagcagcattttccagaatcctaaa
aagcttcatctaactattgggatgttggtgcttttgagtgaggaagagatccagcagaca
tgtgagatgctacagcagtgtaaagaggaattcattaatgatatttctgggggtaaaccc
ctagaagtggagatggcagggatagaatacatgaatgatgatcctggcatggtggatgtt
ctttacgccaaagtccatatgaaagatggctccaacaggctacaagaattagttgatcga
gtgctggaacgttttcaggcatctggactaatagtgaaagagtggaatagtgtgaaactg
catgctacagttatgaatacactattcaggaaagaccccaatgnn

>gi568815588f:72123915_72333113|GENSCAN_predicted_peptide_2|79_aa
MDAVFNLKRFNLMLHPYGSERFLCESVFSYQVASTLKQVKHDQQVARMEKLAGLVEELEA
DEWRFKPIEQLLGFTPSSG

>gi568815588f:72123915_72333113|GENSCAN_predicted_CDS_2|240_bp
atggatgctgtttttaatctcaaaaggttcaacttgatgttacatccttatggctctgag
agattcctctgcgaatctgtttttagctatcaagtggcatccacgcttaaacaggtgaaa
catgatcagcaagttgctcggatggaaaaactagctggtttggtagaagagctggaggct
gacgagtggcggtttaagcccatcgagcagctgctgggattcaccccctcttcaggttga

>gi568815588f:72123915_72333113|GENSCAN_predicted_peptide_3|357_aa
MEAKRTWEWECRGDDKEPFLEKASLLLNMMMRDSAPHTKGKMPKKRSTHREQHVQSQELQ
GSHQKGANPAPCPHPAAGAPNAELSISVAWLPSSRAVGGASFLPRRLLRSGTLSSSANAL
ASVLTMPSLWDRFSSSSTSSSPSSLPRTPTPDRPPRSAWGSATREEGFDRSTSLESSDCE
SLDSSNSGFGPEEDTAYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLAQARLGSRRPA
RLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVGQLALDPSLVPTFQL
TLVLRLDSRLWPKIQGLFSSANSPFLPGFSQSLTLSTGFRVIKKKLYSSEQLLIEEC

>gi568815588f:72123915_72333113|GENSCAN_predicted_CDS_3|1074_bp
atggaagccaagaggacttgggagtgggaatgccgaggagatgacaaggagcctttccta
gagaaggcgagcctgctcttgaacatgatgatgagagacagcgcgccacacacaaaggga
aagatgccaaagaagcgttccacgcacagggaacagcatgtgcaaagtcaggaactccag
ggctctcaccagaaaggcgccaaccctgcgccctgcccccacccagccgccggggcccca
aatgctgagctcagcatctctgtggcctggctgccctcctcccgggcagtgggaggagcc
tccttcctcccgaggcggcttctacgctccggcactctgagttcatcagcaaacgccctg
gcgtctgtcctcaccatgcctagcctttgggaccgcttctcgtcgtcgtccacctcctct
tcgccctcgtccttgccccgaactcccaccccagatcggccgccgcgctcagcctggggg
tcggcgacccgggaggaggggtttgaccgctccacgagcctggagagctcggactgcgag
tccctggacagcagcaacagtggcttcgggccggaggaagacacggcttacctggatggg
gtgtcgttgcccgacttcgagctgctcagtgaccctgaggatgaacacttgtgtgccaac
ctgatgcagctgctgcaggagagcctggcccaggcgcggctgggctctcgacgccctgcg
cgcctgctgatgcctagccagttggtaagccaggtgggcaaagaactactgcgcctggcc
tacagcgagccgtgcggcctgcggggggcgctgctggacgtctgcgtggagcagggcaag
agctgccacagcgtgggccagctggcactcgaccccagcctggtgcccaccttccagctg
accctcgtgctgcgcctggactcacgactctggcccaagatccaggggctgtttagctcc
gccaactctcccttcctccctggcttcagccagtccctgacgctgagcactggcttccga
gtcatcaagaagaagctgtacagctcggaacagctgctcattgaggagtgttga

>gi568815588f:72123915_72333113|GENSCAN_predicted_peptide_4|176_aa
MGSFMETSGAADAACGYVELAALNVESHSKYLNRQVLLHPLLQGDLVNQQVGEGDLLLPE
AVGAGARGHQGTDSRLSSYQPIGAGEAAGVGPVNRFANQHRVIPALPLVSVWSHDPNCPV
TVKPGTCVTIPKDRASFYSTGTWDDVPLQLQQVLMEPKHFPRQQRQSTNKYKDSGK

>gi568815588f:72123915_72333113|GENSCAN_predicted_CDS_4|531_bp
atgggcagcttcatggaaacttctggggcagcagatgcagcctgtggctatgtggagctg
gcggctctgaatgtagagtcccactccaaatacctcaacaggcaagtcctgctgcaccca
ctcctacaaggtgacttggttaatcagcaggttggggagggggacctgctgctcccagag
gccgtaggtgctggagcacgaggacaccagggaactgactcaaggctctcctcttaccag
cccattggagcaggtgaggctgcaggtgtggggcctgtgaacagatttgccaatcaacac
agggttattcctgccttgcccctggtatctgtgtggtcacatgaccccaactgtccagtt
acagtgaaacccgggacatgtgtcacaattcccaaggacagagcctctttctactcaact
ggaacttgggatgatgtgcccctgcagctgcagcaggtgctcatggagcccaaacacttc
ccaagacagcaaaggcaaagtacaaacaagtacaaagactctgggaaatga

>gi568815588f:72123915_72333113|GENSCAN_predicted_peptide_5|171_aa
MAGCRSRALPRGEAAKARQEIERSGPALLGGPAVLEDRVHPPQPLARVLSPPLPEAAPNA
GPAEPTPTGNSRWPTSTARRPGCHRRLSLHTSLQAEGAGSGLGQPRKGLPQCSGRLKGSS
AAKVGAQAEEVPRASEGCEDCQHAVTSQNDSQCRASFSQRYTCGNNPCSYM

>gi568815588f:72123915_72333113|GENSCAN_predicted_CDS_5|516_bp
atggcgggatgcaggtcccgagccctgccccgcggggaggcagctaaggcccggcaagaa
atcgagcgcagtgggccggcactgctgggtgggccggcagtgctggaggaccgagtacac
cctccgcagccgctggcccgggtgctaagccccccattgcccgaggccgctcctaatgcg
gggcccgccgagcccacgcccaccgggaactcgcgctggcccacaagcaccgcgcgcaga
cccggttgccaccggcgcctctccctccacacctccctgcaagctgagggagccggctct
ggccttggccagcccagaaaggggctcccacagtgcagcggcaggctgaagggctcaagt
gccgccaaagtgggagcccaggcagaggaggtgccgagagcgagcgagggctgtgaggac
tgccagcatgctgtcacctctcagaatgactctcagtgtcgggcctcattctctcaacgt
tacacctgtgggaataatccatgcagttatatgtag

>gi568815588f:72123915_72333113|GENSCAN_predicted_peptide_6|368_aa
MRFGDRVPGNLIWGDSQVQMPLQACTVSARRPEHFAASRNTHGDGTATHTLPSTHSHVLF
AAVKALLTHTFSPAPASTAVPCCLEPGPSSRTTHMFSVGFSQYQTGQRAAIKGVWDEPGG
VGPGGMSQVWLKHTVGPQSTLLTREMSPGMREMTHEAGLGEAQGWGGGMVCVPGSSSDTA
ELGDLGKSLLFSGARFPQWEVWRERREREPGLRAALAGQLEFRVGVGLAAPHSEQPAGPA
APGNEGLSTRASGCGGCTGSPSSASPPALLSISHRVLAAFLRGRARDLQPAMPEPPTPSM
GSCAARASPMSAAPCSTAPSPIDHPRAEECGPTARDWQAAPPAAPVHDPLSEASWAPESG
GDVENLYV

>gi568815588f:72123915_72333113|GENSCAN_predicted_CDS_6|1107_bp
atgaggtttggggaccgagtcccaggaaatctcatatggggtgattcccaggtccagatg
cccttgcaggcttgcactgtgtctgccaggagaccagaacattttgctgccagcagaaac
acacatggtgatggcactgctacccacaccctgccgtcaacacactcccacgtgctgttt
gccgctgtcaaagccctgctcacacacacattctcacccgctcctgccagcacagctgtt
ccctgctgcctggaaccaggcccttcatcccgcacgacacacatgttctctgtgggtttt
tctcaataccagacggggcaaagggcagccatcaaaggtgtctgggacgagcccggcggg
gtggggccaggtggaatgtcacaggtgtggctcaagcacacagtgggtcctcagtccacc
ctgctgaccagggagatgagtcctggcatgagggagatgactcatgaagccgggctgggc
gaggcccagggttggggcggggggatggtctgtgtcccaggcagcagctccgacaccgct
gagctgggcgaccttggcaagtcacttctcttttctggggctcgatttcctcagtgggag
gtgtggagggagaggcgcgagcgggaacccgggctgcgcgcggcgcttgcgggccagcta
gagttccgggtgggcgtgggcttggcggccccgcactcggagcagcccgccggccctgcc
gccccggggaatgaggggcttagcacccgggccagcggctgcggagggtgtactgggtcc
cccagcagtgccagcccaccggcgctgctctcgatttctcaccgggtcttagctgccttc
ctgaggggcagggctcgggacctgcagcccgccatgcctgagcctcccaccccctccatg
ggctcctgtgcggcccgagcctccccgatgagcgccgccccctgctccacagcgcccagt
cccatcgaccacccaagggctgaggagtgcgggcccacagcgcgggactggcaggcagct
ccacctgcagccccggtgcacgatccactgagtgaagccagctgggctcctgagtctggt
ggggacgtggagaacctttatgtctag

>gi568815588f:72123915_72333113|GENSCAN_predicted_peptide_7|98_aa
MDTLAAHVAPAVVVAGLFDLWLEAKLGPTMPPSARRPWAGSQQMAEPARGRGDLGPFQQD
QQDSASPRRQEKEKAPAQCPSHERLLPPATVQLDAHRG

>gi568815588f:72123915_72333113|GENSCAN_predicted_CDS_7|297_bp
atggacacacttgctgcccatgtggcccctgcagtggtggtagctggcttgtttgacttg
tggctggaagcaaaattagggcccacgatgccaccttctgcacgcaggccatgggctggc
agccagcagatggcagagcctgccagagggagaggagacctggggccttttcagcaggat
cagcaggactctgcttccccccggaggcaggaaaaggaaaaagcccccgcccagtgcccg
tcccatgagcgactgctgcctccagccaccgtccagctggatgcacaccgtggctga