GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:30:31

Sequence gi568815588r:59692920_60006424 : 313505 bp : 40.61% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    700    695    6                               1.05
 1.03 Term -   6646   6510  137  2  2   81   39   125 0.800   4.10
 1.02 Intr -   7518   7370  149  2  2   15   80    57 0.662  -3.44
 1.01 Init -   9622   9480  143  1  2   41   38   165 0.657   6.45
 1.00 Prom -  10049  10010   40                              -7.15

 2.06 PlyA -  12090  12085    6                               1.05
 2.05 Term -  15864  15719  146  1  2   96   38   114 0.801   4.29
 2.04 Intr -  16339  16108  232  1  1   15   49   180 0.278   3.22
 2.03 Intr -  16944  16560  385  2  1   51  103   175 0.227   9.23
 2.02 Intr -  17457  17165  293  0  2   80   24   120 0.072  -0.19
 2.01 Init -  36106  35990  117  1  0   44   75    66 0.170   1.15
 2.00 Prom -  36473  36434   40                              -3.15

 3.00 Prom +  46449  46488   40                              -5.05
 3.01 Init +  57825  57954  130  2  1   56   28   157 0.347   6.87
 3.02 Intr +  65036  65131   96  0  0   47  100    53 0.267   1.46
 3.03 Term +  84497  84858  362  0  2   70   37   241 0.071  10.91
 3.04 PlyA +  85098  85103    6                              -0.45

 4.02 PlyA -  85238  85233    6                               1.05
 4.01 Sngl -  91369  90002 1368  1  0   42   41   413 0.889  27.86
 4.00 Prom -  92149  92110   40                              -5.65

 5.22 PlyA -  92413  92408    6                               1.05
 5.21 Term - 100192  99998  195  1  0  113   38    64 0.592   0.33
 5.20 Intr - 101678 101554  125  0  2   94   98    42 0.675   5.18
 5.19 Intr - 111601 111501  101  0  2  121   93    53 0.723   7.93
 5.18 Intr - 114212 114003  210  1  0   73   93   236 0.907  19.71
 5.17 Intr - 116812 116656  157  2  1   13   94   101 0.567   1.35
 5.16 Intr - 119825 119716  110  1  2   38   56   160 0.021   6.81
 5.15 Intr - 121836 121733  104  0  2   96   14    88 0.011   0.25
 5.14 Intr - 139734 139606  129  0  0   76  115   129 0.339  14.37
 5.13 Intr - 159783 159634  150  0  0   84   99   153 0.996  15.44
 5.12 Intr - 164239 164159   81  1  0   78   85    75 0.925   5.12
 5.11 Intr - 172349 172233  117  2  0  100   80     7 0.005   0.84
 5.10 Intr - 178048 177869  180  1  0   94   32    82 0.002   2.34
 5.09 Intr - 195662 195522  141  2  0   43   39   116 0.002   1.83
 5.08 Intr - 197478 197323  156  0  0   38   70    89 0.210   1.39
 5.07 Intr - 199565 199419  147  2  0   92   82    66 0.279   5.91
 5.06 Intr - 213517 213203  315  1  0  105   78   446 0.441  40.64
 5.05 Intr - 229001 228871  131  0  2   83  -17    94 0.006  -2.11
 5.04 Intr - 234159 234033  127  0  1   46  121    63 0.403   4.73
 5.03 Intr - 271851 271823   29  1  2   84   78    51 0.012   0.62
 5.02 Intr - 277734 277682   53  2  2   93   60    46 0.001  -0.07
 5.01 Init - 294155 294019  137  2  2   63   98   107 0.836   8.86
 5.00 Prom - 296181 296142   40                              -5.85

 6.03 PlyA - 296304 296299    6                               1.05
 6.02 Term - 296995 296811  185  2  2   92   41   110 0.955   3.42
 6.01 Init - 298906 298843   64  1  1   33   97    55 0.653   2.26
 6.00 Prom - 301353 301314   40                              -3.15

 7.03 PlyA - 301997 301992    6                               1.05
 7.02 Term - 311595 311430  166  2  1   44   53   123 0.759   0.81
 7.01 Init - 313269 313226   44  0  2   89  116    27 0.850   5.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 276423 276627  205  2  1   65   84   147 0.875  11.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:59692920_60006424|GENSCAN_predicted_peptide_1|142_aa
MLRETTYLTVTELTTEDKQEALNDSFEPRFALVLAPVMSQPPPFHISEEILGVFGIRKGS
LNWGNRSKLGYEECKDELDCAVLMRQSQHLSAFILPTDEEKEAESYLSNLLKVTLLAGTR
AAMYTRVIQDTSQCAYSLCEIF

>gi568815588r:59692920_60006424|GENSCAN_predicted_CDS_1|429_bp
atgttgagagaaaccacataccttactgtgactgagctgactacagaggacaaacaagag
gctctgaatgacagttttgagccacgatttgcccttgtcctagccccagtaatgagtcag
cccccaccctttcacatcagcgaggagatcctaggagtctttgggataaggaaggggtct
ctgaactggggaaaccgcagcaaactggggtatgaagaatgcaaagatgaacttgactgt
gcagtgcttatgagacaaagtcagcatttgtcagctttcattctaccaacagatgaagaa
aaagaggcagagagctatttaagtaacttgctgaaggtcacactcttggctggtaccaga
gctgcgatgtacactcgggttatccaagacaccagccagtgtgcttattccttatgcgaa
attttctag

>gi568815588r:59692920_60006424|GENSCAN_predicted_peptide_2|390_aa
MRKLIAGLIFLKIWTCTVRTSTDFPQIEDCSQCIHQVTEDALLSRGAVTKDCTWHPHSSL
PRITDSTKFWCPFLRDHCQLSIQLRPGGRQRPREPGRPRNTRIHLYTPAPPKRARPLAGL
ARARGGRRGHSGAWGRAHNRFRLAGVPRKERQGRKRQQGKPRGGEGEREGGAQRRGPAPQ
LHVAAAAAGLWGQRAAAPGAARSGTDCLILRQGPGPQLARINSRPAGPELQGRAAAAIPT
TPPARPHGALSRVLSTGGPAEAGTQWASFPGNPKAAFCTELKEREGVLGVVRWPPRELPL
DSRELPGLLVEEQGEVHVMQVGLHFPEDRKASNCLGPEREQPGNLLWLQQRPEAFQRADN
HEQTWLSKANQCFTLFSGCLVYPTQTIPEV

>gi568815588r:59692920_60006424|GENSCAN_predicted_CDS_2|1173_bp
atgagaaaactcatcgcgggactcattttccttaaaatttggacttgtacagtaaggact
tcaactgactttcctcagattgaggactgttcccagtgtatacatcaagtcactgaggac
gccctcctttcccgcggagctgtcacaaaggactgtacttggcatcctcactcctcactt
cccaggatcacggactccacaaagttctggtgcccgtttctccgggaccactgccagctg
agcatacagctccggccaggagggcgccagcggccccgggagccagggagaccaaggaac
actcgcattcatttgtacaccccggctccccccaaacgcgcacggcccttggcgggcttg
gccagggcacgtggtgggcggcgggggcacagcggcgcctggggacgcgctcacaaccgg
ttcagactggccggggtgccccgcaaagagagacaagggagaaaaagacagcagggaaaa
ccccggggaggagaaggcgaaagagaaggtggagctcagagaagggggccggctccccag
ctccatgtggccgccgccgctgcgggtctgtgggggcagagggcggcggctcccggggca
gcgcgtagcgggaccgattgcctaatactccggcaggggccggggccgcagctggctcgg
ataaatagccgcccggctggcccggagctgcaggggagagcggcggccgcgatccccacc
acaccaccagcccggccgcacggggcactgagccgggtgctgagcaccggaggccccgcc
gaggccgggactcagtgggcaagttttcccgggaatccgaaggcggcattttgtacggag
ttgaaagagagggagggggtcctgggggtggtacggtggccccccagagagctgcctctg
gactccagagagcttccagggttgctggtggaagagcagggagaggtgcatgtgatgcag
gtgggcctccatttcccagaggaccgaaaggcctccaactgccttggtccggagcgcgag
caaccaggtaacctgctctggcttcagcagcgcccagaggctttccagagagctgataac
cacgaacaaacttggctgtcaaaagcaaatcaatgctttaccttgttttctgggtgccta
gtctatccaacacaaactatccccgaagtttag

>gi568815588r:59692920_60006424|GENSCAN_predicted_peptide_3|195_aa
MPGALAGDQLCEASSESPNAAVPADTCPLSGARMQKWVQDAETDDVIGNIGYTTKLILNK
ALFRMSYLRMNQDMASSQCKLPVDLPFWNLEDSGPLLTSPLGSAPGGTLCGGSNPTFPSR
LPQQRFSMRAPPLQQTFAWASRCFHTFSEIQTEVPKLQFLTSVYLRAQQHLEAAKAWGVH
PLKPQSELYVGPFQP

>gi568815588r:59692920_60006424|GENSCAN_predicted_CDS_3|588_bp
atgcccggagccctggctggggatcagctgtgcgaggcttcctcagagagccccaacgca
gcggtgccagcagacacttgtcctttgagtggtgcgaggatgcagaaatgggtgcaggat
gcagaaacggacgatgtaattggaaacattggttatacaacaaagcttattctgaataag
gctttgttcagaatgtcatatctgagaatgaatcaagatatggccagctcacagtgcaag
ctgccagtggatctaccattctggaatctagaggacagtggccctcttctcacatctcca
ctgggcagtgccccaggagggactctgtgtgggggctccaaccccacatttccctccaga
ctgccccagcagaggttctccatgagggctccgcccctgcagcaaacttttgcctgggca
tccaggtgtttccatacattttctgaaatccagacagaggttcccaaacttcagttcttg
acttctgtgtacctgcgggctcaacagcacttggaagctgccaaagcttggggtgtccac
cctctgaagccacagtctgagctctacgttggcccctttcagccatag

>gi568815588r:59692920_60006424|GENSCAN_predicted_peptide_4|455_aa
MIISIDAEEAFDKIQQLFIVKTLNKLGIDGTCFKIIRASYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVS
AQNLLKLISNFSKVSGYKINVQKSQALLYTNNRQTESQIMSELPFTIASKRIKYLGIQLT
RDVKDLFKDNYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKIIYRFNAIPIKLPM
TFFTELEKTTLKFIWNQKRACITKAILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNR
DIDQWNRTEPSEITPHVYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLT
PYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFISKTPKSMATKAKIDKWDLI
KLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKYS

>gi568815588r:59692920_60006424|GENSCAN_predicted_CDS_4|1368_bp
atgattatctcaatagatgcagaagaggcctttgacaaaattcaacaactcttcatcgta
aaaactctcaataaattaggtattgatgggacgtgtttcaaaataataagagctagctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaaccctattgtctca
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtacaaaaatcacaagcattattatacaccaacaacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatgtgaaggacctcttcaaggacaactacaaaccactgctcaaggaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaa
atggccatactgcccaagataatttacagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
tgcatcaccaaggcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaataga
gatatagatcaatggaacagaacagagccctcagaaataacgccgcatgtctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagacttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttc
atatccaaaacaccaaaatcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcgcaacctactcatctgacaaatactcttaa

>gi568815588r:59692920_60006424|GENSCAN_predicted_peptide_5|964_aa
MGKISEQTFLRRRHTNAKQVYEKVLIITDHQRNANRNYNEISSHPSEPDKYYHLQCVHDV
EKSIEELEAQYDELPIFVGSLECKRLSPSHENTSIVSAYVNGTGNILCSETGYCKVIKSS
NHQSEHKSSICGKQNAFCSSWLLQAESKLLQEHMHTCLGPAAAMADSASESDTDGAGGNS
SSSAAMQSSCSSTSGGGGGGGGGGGGGKSGGIVISPFRLEELTNRLASLQQENKVLKIEL
ETYKLKCKALQEENRDLRKASVTIVGEPRNLASNDPCFSGAWGCLGTEWVSKGLVSQDYT
SLCGCVKVTGLQEHPLLLRGSLESSQDGASTSSSAALSLLSQFLFFHTSFLVSSSLKAIV
DWMSQPCALRLLAPALTFLPKAVDSRLGDLLPAALFPGPQLPSIPVLLVLPSELCMAEAK
LLMGRPPNTAAQFMVLSFNSPGLVVDSSMRLFTGVFLFHSCTILRDVSLAIVVQLRNTAG
FPSMYSCWNVISRSSGVSHCPWARVGNLGCQILVGWEKNDEETLCGLVLTLTDSDYCSQA
RAEQEEEFISNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHL
EQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKIDLENTLEQEQEALVNRLWKRMDK
LEAEKRDISMEIDSPENMMRHIRFLKNEVERLKKQLRAAQLQLTVSKDLWMMLSEGLLYW
EMAVDLGKYKLWPLSTREFCVQEEGGGLIGTNLVRFGYDCMKHGLIENSDFSDSEKMAQY
LEEERHMREENLRLQRKLQREMERREALCRQLSESESSLEMDDERYFNEMSAQGLRPRTV
SSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTRAGMSYYNSPGLHVQHMGTSHGIT
RPSPRRSNSPDKFKRPTPPPSPNTQTPVQPPPPPPPPPMQPTVPSAATSQPTPSQHSAHP
SSQP

>gi568815588r:59692920_60006424|GENSCAN_predicted_CDS_5|2895_bp
atgggcaaaatatctgaacagacatttctcagaagaagacatacaaatgccaaacaggta
tacgaaaaggtgctcatcatcactgatcatcagagaaatgcaaatcgaaactacaatgag
atatcatctcaccccagtgagccagacaaatactatcatcttcagtgtgtgcatgatgtg
gaaaagagtattgaagaacttgaagcacagtatgatgagctaccaatatttgttggatca
ctggagtgcaagaggctaagtccaagccatgaaaacacctctatagtttctgcttatgtc
aatgggacaggaaatatactctgctcagagacagggtattgcaaagtgatcaagagcagc
aatcatcaatcagaacacaaatcctcaatatgtggaaaacagaatgctttttgttcatcc
tggctcctacaagctgagagcaagctgctgcaggaacacatgcacacttgcctgggtccc
gccgcggccatggcggacagcgccagcgagagcgacacggacggggcggggggcaacagc
agcagctcggccgccatgcagtcgtcctgctcgtcgacctcgggcggcggcggtggcggc
gggggaggcggcggcggtgggaagtcggggggcattgtcatctcgccgttccgcctggag
gagctcaccaaccgcctggcctcgctgcagcaagagaacaaggtgctgaagatagagctg
gagacctacaaactgaagtgcaaggcactgcaggaggagaaccgcgacctgcgcaaagcc
agcgtgaccatcgttggggagcctcgcaacctggcttctaacgacccatgtttctctggt
gcttggggatgcctgggaactgagtgggtttccaagggtttggtgagccaggattatacc
agtctgtgtggctgtgtaaaagtaacaggactgcaggagcatcccctccttttgcggggc
tctttggagtcttctcaggatggtgcctccacttcttcctcagcggctctcagtttgctt
tcacagttcctgttcttccacaccagcttcctggtctcctcctctctgaaagccatcgtt
gactggatgtctcagccctgtgcccttaggctgctggccccagctctaaccttcctccct
aaagctgttgacagcaggcttggagaccttttacctgctgccctgtttcctggtccccag
cttccgagcatcccagttttgctggttctgccctcagaattgtgtatggcagaggctaaa
ctgctgatggggagacccccaaatacagctgctcagttcatggtgctctcatttaatagt
cccgggctggtggttgactcctccatgaggttgttcactggggtcttcctatttcatagc
tgtaccatcttgcgggatgttagccttgccattgtggtgcaactgagaaacaccgcaggt
tttccaagcatgtatagctgttggaatgttatatcccggtcttcaggtgttagtcattgc
ccctgggccagggttggaaacctcgggtgtcagattttagtaggatgggaaaagaatgat
gaagagacgctttgtggtctagtcctcacattaacagacagtgattactgctcgcaagcc
agggctgagcaggaagaagaattcattagtaacactttattcaagaaaattcaggctttg
cagaaggagaaagaaacccttgctgtaaattatgagaaagaagaagaattcctcactaat
gagctctccagaaaattgatgcagttgcagcatgagaaagccgaactagaacagcatctt
gaacaagagcaggaatttcaggtcaacaaactgatgaagaaaattaaaaaactggagaat
gacaccatttctaagcaacttacattagaacagttgagacgggagaagattgaccttgaa
aatacattggaacaagaacaagaagcactagttaatcgcctctggaaaaggatggataag
cttgaagctgaaaagcgagatatctccatggagattgattctccagaaaatatgatgcgt
cacatcaggtttttaaagaatgaagtggaacggctgaagaagcaactgagagctgctcag
ttacagctcacagtttccaaggatctgtggatgatgttaagtgagggcctactatattgg
gagatggctgtagacctggggaaatataagctgtggcccctaagtactagggagttctgt
gtgcaagaggaaggaggaggactcataggaacaaatctggtcagatttggatatgattgc
atgaaacatggtttaattgaaaactctgacttttcagattcagagaaaatggcacagtat
ctggaggaggaacgtcacatgagagaagagaacttgaggctccagaggaagctgcagagg
gagatggagagaagagaagccctctgtcgacagctctccgagagtgagtccagcttagaa
atggacgacgaaaggtattttaatgagatgtctgcacaaggattaagacctcgcactgtg
tccagcccgatcccttacacaccttctccgagttcaagcaggcctatatcacctggtcta
tcatatgcaagtcacacggttggtttcacgccaccaacttcactgactagagctggaatg
tcttattacaattccccgggtcttcacgtgcagcacatgggaacatcccatggtatcaca
aggccttcaccacggagaagcaacagtcctgacaaattcaaacggcccacgccgcctcca
tctcccaacacacagaccccagtccagccacctccgcctccacctccgccacccatgcag
cccacggtcccctcagcagccacctcgcagcctactccttcgcaacattcggcgcacccc
tcctcccagccttaa

>gi568815588r:59692920_60006424|GENSCAN_predicted_peptide_6|82_aa
MTQTHTTAPPHQTAVAMGTTQGSCQSTMSDGCTGADKDSNSSPGKVEWACDPDLANHDVS
CPLSISDTLKERHISNLARVLL

>gi568815588r:59692920_60006424|GENSCAN_predicted_CDS_6|249_bp
atgacccagacacacactactgctccaccccaccagactgctgttgccatgggaaccact
caaggaagctgccagtccaccatgtcagatggttgtactggggctgacaaggatagcaac
tcatctccaggaaaagtggaatgggcctgtgacccagacctggctaatcatgatgtttca
tgccccttgtcaataagtgacacacttaaggaaaggcatatctcaaatctagccagagtt
ctcctctga

>gi568815588r:59692920_60006424|GENSCAN_predicted_peptide_7|69_aa
MVLKVAKLTKDYNESIIEIAGHKPGGAGNHQMQKACLGIRPAHRKVELRDGKEGRGGEER
KWLGSNDII

>gi568815588r:59692920_60006424|GENSCAN_predicted_CDS_7|210_bp
atggtgctcaaagtggctaaattgacaaaagactataatgaaagtattattgaaattgca
ggacataagcctggaggtgctggaaaccaccagatgcagaaggcttgcctgggaataagg
ccagcgcataggaaagtagaactgagagatggaaaagagggcagaggaggagaagagaga
aagtggctaggttctaatgacatcatttga