GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:42:25

Sequence gi568815588r:56258421_56461236 : 202816 bp : 34.56% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    892    894    3  0  0  103  101     0 0.227   2.85
 1.02 Intr +  59038  59206  169  0  1   96   94    87 0.810   8.70
 1.03 Term +  59305  59435  131  2  2   57   49   108 0.757   1.16
 1.04 PlyA +  60014  60019    6                               1.05

 2.10 PlyA -  60413  60408    6                               1.05
 2.09 Term -  65798  65678  121  1  1   96   42   113 0.488   4.47
 2.08 Intr -  72019  71873  147  0  0   83   64    82 0.079   3.73
 2.07 Intr - 100304 100116  189  1  0  115   80    71 0.075   6.78
 2.06 Intr - 100527 100385  143  0  2   75  107   189 0.999  17.73
 2.05 Intr - 101112 101056   57  0  0   83   96   104 0.998   8.86
 2.04 Intr - 101433 101267  167  1  2   80   81   258 0.995  23.06
 2.03 Intr - 101721 101598  124  0  1   66   78   115 0.995   7.54
 2.02 Intr - 101963 101873   91  1  1  111   68   117 0.998  11.08
 2.01 Init - 102939 102776  164  0  2   82   89   131 0.981  11.79
 2.00 Prom - 119852 119813   40                              -1.35

 3.03 PlyA - 120177 120172    6                               1.05
 3.02 Term - 120372 120269  104  1  2  132   38    72 0.863   4.06
 3.01 Init - 136681 136654   28  1  1   78  101    10 0.286   1.11
 3.00 Prom - 136805 136766   40                              -1.45

 4.00 Prom + 136936 136975   40                              -4.65
 4.01 Init + 138356 138392   37  1  1   72   81    28 0.123   0.72
 4.02 Intr + 155440 155555  116  2  2   60   53   101 0.165   3.05
 4.03 Intr + 164383 164632  250  0  1   56   55   101 0.117  -0.31
 4.04 Intr + 166088 166158   71  0  2   12   99    93 0.489   0.78
 4.05 Term + 167394 167654  261  2  0   42   54   168 0.643   3.34
 4.06 PlyA + 167985 167990    6                               1.05

 5.04 PlyA - 168453 168448    6                               1.05
 5.03 Term - 183280 183201   80  2  2   73   48    80 0.228  -0.55
 5.02 Intr - 185671 184119 1553  0  2    2   60   315 0.144   8.11
 5.01 Init - 186906 185984  923  0  2   69  -14   450 0.447  26.38
 5.00 Prom - 187368 187329   40                              -6.25

 6.02 PlyA - 187538 187533    6                               1.05
 6.01 Sngl - 188410 187766  645  1  0   77   43   271 0.473  17.42
 6.00 Prom - 191935 191896   40                              -3.45

 7.00 Prom + 195595 195634   40                              -5.65
 7.01 Init + 197109 197241  133  2  1   70   87    86 0.934   7.05
 7.02 Term + 198766 198998  233  2  2    6   42   170 0.428  -0.15
 7.03 PlyA + 199298 199303    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  93747  93851  105  2  0   66   37   104 0.803   0.53
S.002 Intr - 100304 100136  169  1  1  115   94    64 0.822   8.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:56258421_56461236|GENSCAN_predicted_peptide_1|100_aa
MCLSTSFLLVVGQQFGTSQKVGVKRAVTRVSAHQATGVKKTAERHTTPFTKLWAAGTVFR
HLCVPLFRMPGPKAEAGCSMPRPASWLNAEPQLAQDSGVA

>gi568815588r:56258421_56461236|GENSCAN_predicted_CDS_1|303_bp
atgtgtctgtccacctcattcctcttggttgtgggacaacaatttggaacctcccaaaag
gtgggtgtgaaaagagctgtaacacgcgtttctgctcaccaagctacaggagtgaaaaaa
actgctgaacgccacacaaccccattcaccaagctgtgggcagcaggaacagttttcaga
cacctttgtgtccccctcttccggatgccagggcccaaggcagaagctggttgcagcatg
cccagaccagcctcttggctgaacgcagagccacagctggcacaggattctggtgtagca
tga

>gi568815588r:56258421_56461236|GENSCAN_predicted_peptide_2|400_aa
MVLDARPLTSAANRLPRREVDCDFKVILGIVGRQLNSAPGKMEAAETEAEAAALEVLAEV
AGILEPVGLQEEAELPAKILVEFVVDSQKKDKLLCSQLQVADFLQNILAQEDTAKGLDPL
ASEDTSRQKAIAAKEQWKELKATYREHVEAIKIGLTKALTQMEEAQRKRTQLREAFEQLQ
AKKQMAMEKRRAVQNQWQLQQEKHLQHLAEVSAEVRERKTGTQQELDRVFQKLGNLKQQA
EQERDKLQRYQTFLQLLYTLQGKLLFPEAEAEAENLPDDKPQQPTRPQEQSTGDTMGRDP
GVSFKVNERWNRPRMPRSGGQNYVKRGALGARGTTVLLSSAASSLRSPYSGAALLCCPSP
SCSARNGPAEENLACYHQQKPGVEECEVSPPNDDRPGCAA

>gi568815588r:56258421_56461236|GENSCAN_predicted_CDS_2|1203_bp
atggtccttgatgcccgcccactaacctctgcagccaatcgcctgccccggcgcgaagtc
gactgtgacttcaaagtaatcttagggattgtgggaaggcagctgaactcggcgcctgga
aagatggaggcagcggagacagaggcggaagctgcagccctagaggtcctggctgaggtg
gcaggcatcttggaacctgtaggcctgcaggaggaggcagaactgccagccaagatcctg
gttgagtttgtggtggactctcagaagaaagacaagctgctctgcagccagcttcaggta
gcggatttcctgcagaacatcctggctcaggaggacactgctaagggtctcgaccccttg
gcttctgaagacacgagccgacagaaggcaattgcagctaaggaacaatggaaagagctg
aaggccacctacagggagcacgtagaggccatcaaaattggcctcaccaaggccctgact
cagatggaggaagcccagaggaaacggacacaactccgggaagcctttgagcagctccag
gccaagaaacaaatggccatggagaaacgcagagcagtccagaaccagtggcagctacaa
caggagaagcatctgcagcatctggcggaggtttctgcagaggtgagggagcgtaagaca
gggactcagcaggagcttgacagggtgtttcagaaacttggaaacctgaagcagcaggca
gaacaggagcgggacaagctgcagaggtatcagaccttcctccagcttctgtataccctg
cagggtaagctgttgttccctgaggctgaggctgaggcagagaatcttccagatgataaa
ccccagcagccgactcgaccccaggagcagagtacaggagacaccatggggagagaccct
ggtgtgtccttcaaggtaaatgagagatggaacaggcccagaatgccaagatctggggga
cagaactatgtcaaaagaggagccttgggtgctagagggaccacggtactactgtccagt
gctgcctcaagtctccgctccccatattctggtgcagcactcctttgctgccccagcccc
agctgctcagcaaggaatggtcctgctgaggagaatctggcttgttatcatcagcaaaag
ccaggtgtggaggaatgtgaggtctccccgccaaatgatgatagaccaggttgcgctgca
tga

>gi568815588r:56258421_56461236|GENSCAN_predicted_peptide_3|43_aa
MEYYAAIKNGIITYSANYVIDNNKRILKAEKKADRLDTTGLEK

>gi568815588r:56258421_56461236|GENSCAN_predicted_CDS_3|132_bp
atggaatactatgcagccataaaaaatggtataattacatactctgcaaattatgtaata
gacaacaataaacggattctgaaagctgaaaagaaggcagacaggctagacactacagga
cttgagaaataa

>gi568815588r:56258421_56461236|GENSCAN_predicted_peptide_4|244_aa
MTITKSKKTTDAAISALGSTPSLVMRWPLQTHRGTALVVGDKILKNPLDYQACLIMGITL
TELENLNAVEVTGFWVQQGPSCGAQLQRQGWLGQQSQSSSQNNLTFADLWSQLVEYGVPR
SEIVRNPTKLLLNLSFNSADPIIFEVSEMFGAFGRPLQQWMSAVGPCLWDPMVLPYSPRP
RSNWIDRMVESPIKNSAAAPARWQYLAELRQILQKAVCVLNQHSIYGAVFTIAEFMAPGT
KECK

>gi568815588r:56258421_56461236|GENSCAN_predicted_CDS_4|735_bp
atgactattactaaaagtaaaaagacaacagatgctgccatatctgcattagggagcact
ccaagcctagtaatgcgatggcccttgcagactcacagaggtactgccttggtagtcggg
gataagatcttgaagaatcctctggattaccaggcatgccttataatgggaatcacgctc
actgaattggaaaacctaaatgctgtggaagtaactggattctgggtacagcaggggcca
agttgtggtgctcaactacaaaggcaaggttggcttggacagcagagtcaaagcagcagt
caaaataatctgacttttgcagacctatggtctcagctagttgaatatggtgttcctaga
agtgaaatagttaggaatcctactaaattactacttaatttatcatttaattcagcagat
ccaatcatatttgaagtatcagagatgtttggagcatttggaaggcccctgcagcaatgg
atgtcagcagtgggcccatgcttatgggatccaatggtcttaccatattctccacgaccc
agaagcaattggattgatagaatggtggaatcgcctattaaaaactctgctgcagcacca
gctaggtggcaatatcttgcagaactgcgacaaattctccagaaggctgtatgtgttctg
aatcagcattcaatatacggtgctgtttttaccatagcagaatttatggctccaggaacc
aaggagtgtaaatga

>gi568815588r:56258421_56461236|GENSCAN_predicted_peptide_5|851_aa
MKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAQKRKQERSKIDTLTSQLRELE
KQEQTYSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRLLARLIKNKR
EKNQIDAITNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLQRLNQEE
VESLNRPITGSGIVAIINSSPTKKSPGPDGFTAEFYQSYKEELVPFLLKLFQSIEKEGIL
PNSFYEASIILIPKPGRYTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVG
FIPGMQGWAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISIFSKVS
GYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLL
NEIKDDTNKWKNIPCSWVGRINIVKMARPPMVIYRFNAFPIKLPMPFFTELEKTTLKFIW
NQKRAHIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMP
HIYNYLIFDKPDKNKQWGKESLFNKWCWENWLAIYRKLKLEPFVTPYTKINSRWIKDLHV
RPKTRKTLEENLGNTIQDIGMGKDFTSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRV
NRQPTKWEKIFTTYSSDKGLISRIYNELKQIYKIKTNNPIKKWAKDMNRHFSKEDIYAAK
KHMKKCSSSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRCWRGCGEIGTLLHCWWDCKL
VQPLWKSVWRFLRDLELEIPFDPAIPLLGIYPKDYKSCCYKGTCTLPPIYIDNLEAREKN
GNRRSMSPYGI

>gi568815588r:56258421_56461236|GENSCAN_predicted_CDS_5|2556_bp
atgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccag
aatctctgggacgcattcaaagcagtgtgtagagggaaatttatagcactaaatgcccaa
aagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaagagaattagaa
aagcaagagcaaacatattcaaaagctagcagaaggcaagaaataactaaaatcagagca
gaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatccaggagctgg
ttttttgaaaggatcaacaaaattgataggctgctagcaagactaataaagaataaaaga
gagaagaatcaaatagatgcaataacaaatgataaaggggatatcaccaccgatcccaca
gagatacaaactaccatcagagaatactacaaacacctctacgcaaataaactagaaaat
ctagaagaaatggataaattcctcgacacatacaccctccaaagactaaaccaggaagaa
gttgaatctctgaatagaccaataacaggctctggaattgtggcaataatcaatagctca
ccaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccagagttacaag
gaggagctagtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctc
cctaactcattttatgaggccagcatcatcctgataccaaagccgggcagatacacaacc
aaaaaagagaattttagaccaatatccttgatgaacatcgatgcaaaaatcctcaataaa
atactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggc
ttcatccctgggatgcaaggctgggcaatcaggcaggagaaggaaataaagggtattcaa
ttaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatctagaa
aaccccatcgtctcagctcaaaatctccttaagctgataagcatcttcagcaaagtttca
ggatacaaaatcaatgtacaaaaatcgcaagcattcttatacaccaataacagacaaaca
gagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctg
ggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctc
aatgaaataaaagatgatacaaacaaatggaagaacattccatgctcatgggtaggaaga
atcaatattgtgaaaatggccagaccgcccatggtaatttatagattcaatgccttcccc
atcaagctaccaatgcctttcttcacagaattggaaaaaactactttaaagttcatatgg
aaccaaaaaagagcccacattgccaagtcaatcctaagccaaaagaacaaagccggaggc
atcacgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtac
tggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataatgccg
catatctacaactatctgatctttgacaaacctgacaaaaacaagcaatggggaaaggaa
tcactatttaataaatggtgctgggaaaactggctagccatatatagaaagctgaaactg
gaacccttcgttacaccttacacaaaaattaattcaagatggattaaagacttacatgtt
agacctaaaaccagaaaaaccctagaagaaaacctaggcaataccattcaggacataggc
atgggtaaggacttcacgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacctacaaaatgggagaaaatttttacaacctactcatctgacaaagggcta
atatccagaatatacaatgaactcaaacaaatttacaagataaaaacaaacaaccccatc
aaaaagtgggcgaaggacatgaacagacatttctcaaaggaagacatttatgcagccaaa
aaacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaca
atgagataccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacagg
tgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaacta
gttcaaccattgtggaagtcagtgtggcgattcctcagggatctagaactagaaatacca
tttgacccagccatcccattactgggtatatacccaaaggactataaatcatgctgctat
aaaggcacatgcacactacctcctatctatatagataatttggaagccagggagaagaat
gggaaccgaagatctatgagcccttatggcatatga

>gi568815588r:56258421_56461236|GENSCAN_predicted_peptide_6|214_aa
MKEMKQEGKFREKRIKRNKQCLQEIWDYVKRPNLHLIGVPESDGENGTQLENTLQDIIQE
NFPNLARQANIQIQEIQRMPQRYSSGRATPRYIIVRFTKVEMKEKMLRAVREKGWVTQKG
KPIRLTADLSAETLQARREWGPMFNILKEKNFQRRISYPDKLSFISEGEIKYFTDKQMLR
DYVTTRPALKELLKEALNMERNNRYQPLQKHAKL

>gi568815588r:56258421_56461236|GENSCAN_predicted_CDS_6|645_bp
atgaaggaaatgaagcaagaagggaagtttagagaaaaaagaataaaaagaaacaaacaa
tgtctccaagaaatatgggactatgtgaaaagaccaaatctacatctgattggtgtacct
gaaagtgacggggagaatggaacacagttggaaaacactctgcaggatattatccaggag
aacttccccaatctagcaaggcaggccaacattcagattcaggaaatacagagaatgcca
caaagatactcctcgggaagagcaactccaagatacataattgtcagattcaccaaagtt
gaaatgaaggaaaaaatgttaagggcagtcagagagaaaggttgggttacccagaaaggg
aagccaatcagactaacagcagatctctcagcagaaactctacaagccagaagagagtgg
gggccaatgttcaacattcttaaagaaaagaattttcaacgaagaatttcatatccagac
aaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgaga
gactatgtcaccaccaggcctgccctaaaagagctcctgaaggaagcccttaacatggaa
aggaacaacaggtaccagccactgcaaaaacatgccaaattgtaa

>gi568815588r:56258421_56461236|GENSCAN_predicted_peptide_7|121_aa
MKLKEAVGKGLKQNVESNYGILEKREPLSSSGRHSFVVMWKIRKAQPNTATTGTLASLLT
VQGGTHLIVLQLCQCMPPYSTRKVTFNLLLPSLGPNDWPIWHPHPQENFTTASTNNHNIR
R

>gi568815588r:56258421_56461236|GENSCAN_predicted_CDS_7|366_bp
atgaagcttaaggaggctgttggtaaaggtctgaagcaaaatgtagaaagtaactatgga
attctagagaaaagggagcccttgtcaagtagtggaaggcattcatttgtggtgatgtgg
aaaataagaaaagcccagcccaacactgccactactggcacccttgcaagcctccttact
gtccaaggagggacccacctaatcgtattacaactgtgccagtgtatgccaccatacagc
acaaggaaagtcacattcaacctgctgctgccatcactgggacccaatgactggcccatc
tggcatcctcatccccaggaaaacttcaccacagcctccactaataaccataacataagg
cgatga