GENSCAN 1.0	Date run:  8-Nov-116	Time: 07:24:16

Sequence gi568815588r:30511958_30729705 : 217748 bp : 43.88% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3396   3546  151  2  1   76   77    68 0.706   4.71
 1.02 Term +  17576  17766  191  0  2   71   47   156 0.127   7.41
 1.03 PlyA +  21163  21168    6                               1.05

 2.03 PlyA -  23215  23210    6                               1.05
 2.02 Term -  41388  41170  219  0  0  115   55   107 0.948   7.14
 2.01 Init -  42249  42163   87  0  0   58   46    72 0.455   0.64
 2.00 Prom -  44824  44785   40                              -2.36

 3.00 Prom +  44897  44936   40                              -7.26
 3.01 Init +  47304  47371   68  2  2   70   87    25 0.831   1.15
 3.02 Intr +  52232  52455  224  2  2  104   47    86 0.541   3.87
 3.03 Intr +  60662  60781  120  0  0   44   87   153 0.789  11.27
 3.04 Intr +  74564  74653   90  0  0   70   77    55 0.469   2.57
 3.05 Intr +  77648  77796  149  0  2  103  -13    51 0.232  -3.55
 3.06 Term +  77844  77996  153  2  0   78   43   105 0.329   2.92
 3.07 PlyA +  79056  79061    6                               1.05

 4.06 PlyA -  79131  79126    6                               1.05
 4.05 Term -  81556  81466   91  0  1   73   48   122 0.491   3.89
 4.04 Intr -  84189  84142   48  2  0  102  113    10 0.275   2.70
 4.03 Intr - 100943 100865   79  0  1  104   91    75 0.901   8.01
 4.02 Intr - 102288 102212   77  2  2   97   19    12 0.373  -5.64
 4.01 Init - 102609 102503  107  0  2   89   61    93 0.714   5.25
 4.00 Prom - 104014 103975   40                              -6.06

 5.00 Prom + 104605 104644   40                              -6.36
 5.01 Sngl + 105947 107230 1284  1  0   70   44   303 0.867  20.07
 5.02 PlyA + 107871 107876    6                               1.05

 6.07 PlyA - 108208 108203    6                               1.05
 6.06 Term - 114112 114063   50  2  2   77   36    42 0.473  -4.63
 6.05 Intr - 114306 114148  159  1  0  103   94   344 0.860  36.46
 6.04 Intr - 114983 114820  164  1  2  102   37   135 0.803   9.42
 6.03 Intr - 116758 116667   92  1  2   65   55    66 0.507  -0.21
 6.02 Intr - 125571 125408  164  1  2   73   73    35 0.358   0.19
 6.01 Init - 126203 126059  145  2  1   57    7   123 0.194  -0.59
 6.00 Prom - 126726 126687   40                              -0.36

 7.00 Prom + 132110 132149   40                              -3.96
 7.01 Init + 135497 135595   99  1  0   84   82    34 0.294   2.66
 7.02 Intr + 151599 151683   85  2  1   65  116    34 0.484   3.29
 7.03 Intr + 153493 153527   35  2  2   82   91    -7 0.292  -3.06
 7.04 Intr + 159609 159722  114  2  0   86   87    53 0.873   5.64
 7.05 Intr + 163562 163645   84  1  0   74   94    34 0.440   2.62
 7.06 Intr + 164171 164248   78  1  0  102   76    24 0.566   2.35
 7.07 Intr + 173305 173452  148  0  1   45   86   157 0.648  11.01
 7.08 Intr + 177282 177371   90  1  0  114  115   -20 0.852   3.27
 7.09 Intr + 179117 179294  178  0  1   69   89   362 0.945  33.38
 7.10 Intr + 181539 181832  294  0  0   87   22   214 0.908  10.82
 7.11 Intr + 183981 184120  140  0  2   65   63   210 0.920  16.31
 7.12 Intr + 185419 185559  141  2  0   51   10   114 0.458   0.22
 7.13 Intr + 186413 186558  146  0  2   83   77   113 0.957   9.70
 7.14 Intr + 188130 188305  176  2  2   86   79   163 0.999  13.94
 7.15 Intr + 191565 191709  145  0  1   99   61    57 0.997   4.38
 7.16 Intr + 192456 192732  277  2  1   97   92   445 0.987  42.89
 7.17 Intr + 197341 197496  156  2  0   85  110   158 0.614  17.68
 7.18 Intr + 199405 199602  198  2  0   96   40   114 0.383   6.72
 7.19 Intr + 204573 204616   44  1  2   75   62     3 0.289  -5.64
 7.20 Intr + 204970 205125  156  0  0  125   99   149 0.987  19.91
 7.21 Intr + 211252 211379  128  0  2   74   68    61 0.021   2.18
 7.22 Term + 214894 215083  190  1  1   59   45    97 0.054  -0.58
 7.23 PlyA + 216649 216654    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:30511958_30729705|GENSCAN_predicted_peptide_1|113_aa
MGLLQWTCYIRPGRPPADIGRPRRTPCLQGDKECGLGEHQYCWTLQARTVGNSGKARMLL
WLCGQPMTRASSTFREICECCPSRATVAHHRHFLSSYPAPRLSEAASGWVRLA

>gi568815588r:30511958_30729705|GENSCAN_predicted_CDS_1|342_bp
atgggcctgctgcaatggacttgctatataagaccaggacgaccaccagccgacattggg
aggccccggaggacaccctgcttacaaggggataaggaatgtgggttaggggagcaccag
tactgctggactctgcaggccaggacggttggtaactcgggcaaagcacgcatgctgctg
tggctctgtggtcagcccatgacgagagcctcgtccacgttccgtgaaatctgtgagtgc
tgcccgagtcgagctaccgttgctcaccaccgccacttcctgtcttcctacccagcgccg
cggctctcggaggctgccagtggctgggtgcgcctggcctga

>gi568815588r:30511958_30729705|GENSCAN_predicted_peptide_2|101_aa
MAKRRLDMEGKLQLDEFNQLSLHRMKPATDRGPQPPGHRPVLAYQELGHTAGGEQQQASK
ALSELTAAPHHLHYCLSSTSCRISGSIRFSWECKTYCELNI

>gi568815588r:30511958_30729705|GENSCAN_predicted_CDS_2|306_bp
atggccaaaaggagactagacatggaaggcaaattgcagttagatgaatttaaccagctt
tctctacaccgcatgaagccagcgactgacaggggtccccaacccccaggccatagacca
gtactggcctatcaggaactgggccacacagcaggaggtgagcagcagcaagcaagcaaa
gctttatctgaattaacagccgctccgcatcacttgcattactgcctgagctccacctcc
tgtcggatcagcggcagcattagattctcatgggagtgcaaaacctattgtgaactgaac
atctga

>gi568815588r:30511958_30729705|GENSCAN_predicted_peptide_3|267_aa
MSTNRQSGGVYLVYDLPLGTLNWQGAEFNKPVGEPSTCTHILNITGESNKGNCSALHIPR
ADVWWYCGKRDLHDLLPSNWICTCALVQLAIPFILAFYKCILILILIIIIGTKTGIDWAL
TTCREYAMSSAWSPDKIEIYLLMVLLAEKSKTEGSASGEGFLAVSAKGSGLGRPKRCVTG
LRAGTWEEVLRSSASQDASSRFAASFEDSGHTGPSTAHQHPPEEPPRGENGTTNRFSYES
VDPENIPELISNISSKGLELQGLEQSI

>gi568815588r:30511958_30729705|GENSCAN_predicted_CDS_3|804_bp
atgagcactaacaggcaaagtggtggcgtttacctggtttatgaccttcctctaggaaca
ctcaattggcagggggcagagttcaataagcctgtgggagaaccctcgacttgtacccac
atcctaaacattactggtgagtcaaacaaaggcaactgctcagctcttcatataccccgg
gctgatgtctggtggtattgtggaaagagggacctccatgacctattaccatccaactgg
atctgcacttgtgccttagttcaactggccattccattcatcctggcattctacaaatgc
atcctcatcctcatcctcatcattatcatcggcaccaaaactggtattgactgggcactc
actacatgcagagagtatgccatgtcctcagcgtggagtcctgataagatagaaatttat
ttgctcatggttctgttggctgagaagtccaagactgagggatcagcatctggtgagggc
tttcttgctgtgtcagccaaaggaagtggccttgggcggcccaagcgctgtgttactggg
ctgcgggccggtacttgggaagaagtcctccgcagttcagcatcccaggatgcatctagc
agatttgctgcctcatttgaggactcaggacacacaggtccctccactgctcaccaacac
cccccagaggagcctcccaggggagaaaatggaaccaccaacaggttctcctatgagagc
gtggatccagagaatatccctgagcttatttcaaatattagttccaaagggctagaactg
cagggcttagaacaatcaatataa

>gi568815588r:30511958_30729705|GENSCAN_predicted_peptide_4|133_aa
MEMGLPDPLLREDMLPPLQLCDEQTVPATCFRIGFRCGLLKISGISNPSQHQLLEDSTCS
RTLVTDDLTDAIICAKKIVKETQGMNYCSLERPHGVETGFLSPRGHNFHMWVPYTHHQGH
RLQTTLIPDDRNF

>gi568815588r:30511958_30729705|GENSCAN_predicted_CDS_4|402_bp
atggagatgggcctcccagatcccctgctaagggaagacatgctgcccccgctgcagttg
tgtgatgagcagacagtacctgccacctgcttcaggattggcttcaggtgtggattgctg
aaaatatctggcatttcaaacccatctcagcatcagctcctggaggactcaacttgcagt
agaaccttggtcactgatgacctcacagatgcgattatctgtgccaagaaaattgttaaa
gagacacaaggaatgaactattgctcacttgaacgtcctcatggtgtggaaactggcttc
ctttccccacgaggccacaacttccacatgtgggtcccctacactcatcaccagggacac
aggctccagaccaccctgatccctgatgaccgcaacttctga

>gi568815588r:30511958_30729705|GENSCAN_predicted_peptide_5|427_aa
MTVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDVKDLFKENYKPLLKEVKEDTNKWKNIPCSWVGRINIVKMAILPKVIY
RFNAIPIKLSMTFFTELEKTTLKFIWNQKRARIVKSILSQKNKAGGITLPDFQLYYKATV
TKTAWYWYQNRDIDQWNRTEPSEIILHIYNYVIFDKPDKSKKWGKNSLFNKWCWENWQAI
CRKLKLDPFLTPYTKINSRWTKDLNVRPKTIKTLEENLGNTIQDIGMGKDFMSKTQKAMA
TKAKIDKWDLIKLKSFCTTKETTIRVNRQPTEWEKIFAIYSSDKRLISRIYKELKQIYKK
KTNNPTNKWAKYMNRHFSKEDIYAANRHMKKCSSSLAIREMQIQTTMRYHLTSVRMAIIK
KSGNNRC

>gi568815588r:30511958_30729705|GENSCAN_predicted_CDS_5|1284_bp
atgactgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggacgtgaaggacctcttcaaggag
aactacaaaccactgctcaaggaagtaaaagaggatacaaacaaatggaagaacattcca
tgttcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttat
agattcaatgccatccccatcaagctatcaatgactttcttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagagcccgcattgtcaagtcaatcctaagccaa
aagaacaaagctggaggcatcacgctacctgacttccaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaacagag
ccctcagaaataatactgcatatctacaactatgtgatctttgacaaacctgacaaaagc
aagaaatggggaaagaattctctatttaataaatggtgctgggaaaattggcaggccata
tgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatgg
actaaagacttaaatgttagacctaaaaccataaaaaccctagaagaaaacctaggcaat
accattcaggacataggcatgggcaaggacttcatgtctaaaacacaaaaagcaatggca
acaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacaacaaaa
gaaactaccatcagagtgaacaggcaacctacagaatgggagaaaatttttgcaatctac
tcatctgacaaaaggctaatatccagaatctacaaagaactcaaacaaatttacaagaaa
aaaacaaacaaccccaccaacaagtgggcaaagtatatgaacagacacttctcaaaagaa
gatatttatgcagccaacagacacatgaaaaaatgctcatcatcactggccatcagagaa
atgcaaatccaaaccacaatgagataccatctcacatcagttagaatggccattattaaa
aagtcaggaaacaacaggtgctag

>gi568815588r:30511958_30729705|GENSCAN_predicted_peptide_6|257_aa
MVFALTCCLSLELPAVGMLLTATCDGFSIVPPRGFFTSISSYILGLLIAWDNYSLCLLHT
SVYCQSPCGDVLAVVYVGLNLRREISARDKFGDEEAKKITRDRPFNAGIQPQGEKLMTRE
VSRQVQKMTRDEHMFCLRQALRMKAAGILTLIGCLVTGAESKIYTRCKLAKIFSRAGLDN
YWGFSLGNWICMAYYESGYNTTAQTVLDDGSIDYGIFQINSFAWCRRGKLKENNHCHVAC
SGPGEKADNGITNHVLL

>gi568815588r:30511958_30729705|GENSCAN_predicted_CDS_6|774_bp
atggtgtttgctctcacctgttgtctgtccctggagctgcctgctgtaggcatgttactg
acagcaacatgtgacggcttctccatcgtgcctccaaggggtttcttcacttcaatttct
tcctacatactgggcttgctcatagcatgggacaattattccttgtgtcttttacataca
tctgtttattgccagtccccatgtggggatgtcttggcagttgtgtatgttggcctgaac
ctcaggagagaaatctcagccagagataaatttggggatgaagaagccaagaagataacc
agggacaggcctttcaatgcaggaatccagccccagggagagaaactaatgactagagaa
gtttccaggcaagtgcagaaaatgacacgggatgaacatatgttctgtctccggcaggct
ttgaggatgaaggctgcgggcattctgaccctcattggctgcctggtcacaggcgccgag
tccaaaatctacactcgttgcaaactggcaaaaatattctcgagggctggcctggacaat
tactggggcttcagccttggaaactggatctgcatggcgtattatgagagcggctacaac
accacagcccagacggtcctggatgacggcagcatcgactacggcatcttccagatcaac
agcttcgcgtggtgcagacgcggaaagctgaaggagaacaaccactgccacgtcgcctgc
tcaggaccaggtgagaaagccgacaatgggatcaccaaccatgtcttgctttaa

>gi568815588r:30511958_30729705|GENSCAN_predicted_peptide_7|1033_aa
MKKVNHERVKYHEHALPYPASISKGLGTCSESLKEFSLEDKEQLANHERGIDAQLLVALP
KEFSKASQWPRVQIGIVEEKRGGRLEKQTQQEAGGQQGTSQQPAGQSLVRKYSAMFPVCF
NLQEEGGVADDSAISNLLWEPVYASTYYRAIPAAHKYLSFVSTNRRVTESRESQMMIEER
KQLITVREEAWKTRGRGAANDSTQFTVAGRMVKKGLASPTAITPVASAICGKTRGTTPVS
KPLEVGGMHETVLTVTGKSVKELMKPDDDETFAQFYRNVDCNMLRSPVELDEDFDVIFDP
YAPKLTSSVAEHKWAVRPKRQVQASKNPLKMLAAREDLLQEYTEQRLNVAFMESKRIKVE
KREYLNPHPASVFGNGFFRCFTHCLVFCLVKANNGAQKALMNFSEVTLAGLASKENFSNV
SLRSVNLTEQNSNNSAVPFKRLMLLQIKGRRHVQTRLVEPRASALNSGDCFLLLSPHCCF
LWVGEFANAIEKAKVAAGDPKEDELYEAAIIETNCIYCLMDDKLVPDDDYWGKIPKCSLL
QPKEVLVFDFGSEVYVWHGKEVTLAQRKIEFQLAKHLWNGTFDYENCDINPLDPGECNPL
IRRKGQGRPDWAIFGRLTEHNETILFKEKFLDWTELKRPNEKNPGELAQHKEDSRADVKR
NNVTRMVSVPQTTAGAILDRVNIGCGCGLVEGHHRRQFEITSVSVDVWYILEFDYSRLPK
QSIGQFHEGDAYVVKWKFMVSTADPGSFNFAPRLFVLSSSSGDFAATEFVYPARAPSVVS
SMPFLQEDLYSVPQPVPFLDNHHEVCLWQGWWPIENKITGSARICRASDQKSTMETMLQY
CKDEASPAAPRSPRPFFPFCMVTWSYVSSGCVQMAQDMEVSNQITLVEDVLAKLCKTIYL
LANLLARPLPEGVDPLKLEIYLTDEDFERKDVGLLQTSDNGCTPRIRSERWTCQGKASEA
SVPTISTMDALWRSQERKCRDWPGKEIRKRQRRYLCIWRGAAAQTEGCGQQVALLLNAEA
KAPTPAPPPASQS

>gi568815588r:30511958_30729705|GENSCAN_predicted_CDS_7|3102_bp
atgaagaaagtcaatcatgaacgtgtgaaatatcacgaacacgccctcccctaccctgca
tcaatcagcaaggggctggggacctgttctgagagcctgaaggagttctcactcgaagat
aaagaacagctcgctaaccacgaaagaggaatcgatgctcagcttttagttgcacttcct
aaagagttttcaaaggcaagtcagtggcctcgtgtccagattggcattgttgaagaaaag
cggggaggaagattggagaaacagactcagcaggaggcaggagggcagcaaggcaccagc
cagcagcctgcagggcagtccctcgtcaggaagtactctgccatgttccctgtttgtttt
aacctgcaggaagaaggaggagttgcggatgatagtgccatttctaatctgctttgggaa
cctgtatatgcttctacttactatcgtgctattcctgctgcccataaatacctgtctttt
gtgtcgactaatcggcgggtcacagaaagtcgagagagccaaatgatgattgaggagagg
aagcagctcatcactgtgagagaggaggcctggaagacgagaggcagaggagcggccaac
gactcgacccagttcactgtggctggcaggatggtgaagaaaggtttggcgtcacctact
gccataaccccagtagcctcagccatttgcggtaaaacaagaggcaccacacccgtttcc
aaacccctggaagttggcgggatgcacgaaacggtgctcactgtcaccggcaaatctgtg
aaggagctgatgaagccggatgatgacgaaacctttgcccaattttaccgcaacgtggat
tgtaatatgctgagaagtcctgtggagctggacgaggacttcgatgtcattttcgatcct
tatgcacccaaattgacgtcttccgtggccgagcacaagtgggcagttaggcccaagcgc
caggttcaggcctccaaaaaccccctgaaaatgctggcggcaagagaagatctccttcag
gaatacactgagcagagattaaacgttgccttcatggagtcaaagcggataaaagtagaa
aagagagagtatttgaacccccaccctgcttctgtgtttgggaatggcttcttccgatgc
tttactcattgcttggttttctgccttgtgaaggccaataatggtgctcagaaggccctc
atgaacttctcagaagtcaccctggcgggtttagccagtaaagaaaacttcagcaacgtc
agcctgcggagcgtcaacctgacggaacagaactctaacaacagcgccgtgcccttcaag
aggctgatgctgttgcagattaaaggaagaagacacgtgcagaccaggctggtggaacct
cgagcttcggcgctcaatagtggggactgcttcctcctgctctctccccactgctgcttc
ctgtgggtaggagagttcgcaaacgccatagaaaaggcgaaggttgctgctggagaccca
aaagaagatgaactctatgaagcagccataatagaaactaactgcatttactgtctcatg
gatgacaaacttgttcctgatgacgactactgggggaaaattccaaagtgctctcttctg
caacccaaagaggtactggtgtttgattttggtagtgaagtttacgtatggcatgggaaa
gaagtcacgttagcacaacgaaaaatagaatttcagctggcaaagcacttatggaatgga
acctttgactatgagaactgtgacattaatcccctggatcctggagaatgcaatccgctt
atccgcagaaaaggacaggggcggcccgactgggcgatatttgggagacttactgaacac
aatgagacgattttgttcaaagaaaagtttctggattggacagaactgaaaagaccaaat
gagaagaaccccggggaacttgcccagcacaaggaagactccagggccgatgtcaagcgg
aacaacgtgacacggatggtgtccgtgccccagacgacagcaggtgccatcctggacagg
gtgaacattggctgtggctgtggcctggtggaaggacaccacaggaggcagtttgagatc
accagtgtctccgtggatgtctggtacatcctggaatttgactatagcaggctccccaaa
caaagcatcgggcagttccacgagggggatgcctatgtggtcaagtggaagttcatggtg
agcacggcagatcccggaagttttaacttcgcgccccgcctgttcgtcctcagcagctcc
tctggggatttcgcagccacggagttcgtgtaccctgcccgagccccctctgtggtcagt
tccatgcccttcctgcaggaagatctatacagcgtgccccagccagtgcctttccttgac
aatcaccacgaggtgtgcctctggcaaggctggtggcccatcgagaacaagatcactggt
tctgcccgcatctgccgtgcctctgaccaaaagagcacgatggagaccatgctccagtat
tgcaaagatgaggcctcgccagcagctccccggagccctagaccctttttccctttctgc
atggtgacatggagctatgtgtcctcaggctgtgtgcagatggcacaggacatggaagtt
tccaatcagatcaccctcgtggaagacgtcttagccaagctctgtaaaaccatttacctg
ctggccaacctcctggccaggccactcccggagggggtcgatcctctgaagcttgagatc
tatctcaccgacgaagacttcgagagaaaggatgttgggctgctccagacctctgacaat
ggatgcacccccaggattagatcagaaagatggacctgccaggggaaagcgtcagaggct
tctgttcctaccatcagtaccatggatgcgctctggagaagccaggaaaggaaatgcagg
gactggccagggaaggaaatacggaagcgacaaaggagatacctttgcatctggcgaggg
gcagccgcgcagacggaaggctgtggccagcaggtggcgctgttgctcaacgcagaagcc
aaggctccaactccagcgccgcctccggcttcacagtcctag