GENSCAN 1.0	Date run:  8-Nov-116	Time: 07:31:10

Sequence gi568815588r:17490367_17717339 : 226973 bp : 40.03% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  14515  14554   40                              -2.65
 1.01 Sngl +  17736  18038  303  2  0   98   49   181 0.685  10.78
 1.02 PlyA +  19273  19278    6                               1.05

 2.03 PlyA -  19371  19366    6                               1.05
 2.02 Term -  24356  24172  185  0  2   60   46    97 0.419  -0.58
 2.01 Init -  25292  25196   97  2  1   81   37   142 0.458   8.92
 2.00 Prom -  27358  27319   40                              -2.45

 3.00 Prom +  30849  30888   40                              -3.75
 3.01 Init +  44906  44962   57  1  0   67  115    24 0.424   4.36
 3.02 Intr +  50591  50650   60  1  0   91   75    33 0.337   0.31
 3.03 Intr +  61529  61639  111  1  0   87   34    72 0.043   1.36
 3.04 Intr +  64283  64494  212  1  2   27  103    94 0.037   1.59
 3.05 Intr +  65150  65261  112  2  1   86   65    31 0.070   0.06
 3.06 Intr +  82057  82195  139  0  1   81   44    82 0.067   2.22
 3.07 Intr +  87609  87836  228  1  0   26   93   132 0.374   4.42
 3.08 Term +  88620  88753  134  1  2   32   37   107 0.421  -2.73
 3.09 PlyA +  89102  89107    6                               1.05

 4.05 PlyA -  90666  90661    6                               1.05
 4.04 Term -  98950  98834  117  1  0    4   39   202 0.596   4.46
 4.03 Intr - 113681 113564  118  1  1   70  107    45 0.894   4.15
 4.02 Intr - 119368 119258  111  0  0   73   38    89 0.605   0.98
 4.01 Init - 126973 126717  257  1  2   59   59   443 0.944  33.25
 4.00 Prom - 127233 127194   40                              -8.55

 5.00 Prom + 132045 132084   40                              -5.95
 5.01 Init + 139709 139826  118  1  1   84  109   158 0.744  17.91
 5.02 Intr + 153894 154013  120  1  0   -8  111   165 0.444   8.75
 5.03 Intr + 155763 155857   95  1  2   54   99    61 0.417   2.56
 5.04 Intr + 160843 160886   44  0  2  150   64   -16 0.071  -1.68
 5.05 Intr + 166381 166523  143  1  2   72   89    77 0.158   5.28
 5.06 Intr + 170098 170182   85  2  1   65  106    65 0.283   3.96
 5.07 Intr + 194309 194384   76  2  1   92   74    48 0.739   2.40
 5.08 Intr + 194466 194561   96  2  0   90  116    16 0.900   3.89
 5.09 Intr + 197661 197807  147  2  0  115   68   133 0.990  13.51
 5.10 Intr + 202856 202946   91  1  1   87  100   113 0.999  11.05
 5.11 Intr + 204683 204875  193  0  1   54   95   194 0.984  14.33
 5.12 Intr + 206409 206503   95  0  2   68   80    20 0.895  -2.11
 5.13 Intr + 209825 209913   89  0  2   29  100   122 0.883   6.27
 5.14 Intr + 214065 214152   88  2  1   39   93   110 0.640   5.22
 5.15 Intr + 214604 214658   55  0  1   70   66    72 0.967   0.32
 5.16 Intr + 215222 215375  154  2  1   70  115   122 0.969  12.25
 5.17 Intr + 218410 218585  176  0  2   77   25   148 0.834   5.22
 5.18 Term + 224177 224414  238  2  1  102   48   232 0.807  15.26
 5.19 PlyA + 226368 226373    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:17490367_17717339|GENSCAN_predicted_peptide_1|100_aa
MAERERHLLHGGRREKNENQVKEVSLIKPSDLGSLIHYHKNSMGETIPVIHLPPGPSHNT
WELLELQFKMRFWWGHSQTISGSKAVSIQATRTPLPVLTR

>gi568815588r:17490367_17717339|GENSCAN_predicted_CDS_1|303_bp
atggcggaacgcgaaaggcatctcttacatggtggcagacgagagaaaaacgagaaccaa
gtgaaagaggtttcccttataaaaccatcagatcttgggagccttattcactaccacaag
aacagtatgggggaaaccatccctgtaattcacctcccaccaggtccctcccacaacaca
tgggaattattggagctacaattcaagatgagattttggtggggacacagccaaactata
tcaggcagtaaagcggtatccatccaagccaccagaacgccattgccagttctgacacga
tga

>gi568815588r:17490367_17717339|GENSCAN_predicted_peptide_2|93_aa
MRRYNETATVCTTRSRRQPSQQLDLGLPSPQNSVPAGKAPVSSAQLGVFPPHPDRPGSAG
LYVLLSSPEAQKTHLPCPVPPLPSKKAMFWLDF

>gi568815588r:17490367_17717339|GENSCAN_predicted_CDS_2|282_bp
atgagaagatacaacgagacggcaaccgtctgcacaacaagaagcagacgccagccctct
caacagcttgatcttggacttcccagcccccagaactcggtgcctgctggaaaggcaccg
gtctcctctgctcagcttggtgtcttccctccacacccagataggccagggagcgctggt
ctatatgtcctcctgtcttctccagaggcccagaaaacacacctgccctgtccagttcct
cctctcccctcaaagaaagctatgttttggcttgatttctaa

>gi568815588r:17490367_17717339|GENSCAN_predicted_peptide_3|350_aa
MQRASQRVLAPSFTAQNAQDWLLCVSNMTVILGAIILNCVDSVKTGLKDAQMMSTAWYVE
GKSIPSQKSSVLKIVVAPSDQLPVNIKQEEKCEKERDWLGLPAYIFLLCWMLAVFEHQTP
SSSVLRLRLALLTPQLADSLLWDLVIINDKYSPPLCLLSTSIAQYYSETFPNPPSWNPSV
SKTEVILGYCVWLCRMCTAQLYGVPFTLWSIGMVLTTARLYSAALELLHGEGVGVGLPEG
GIDLPKGEVPPCIEKGMGARVQDFTAAGPEIGSTDPIPSPQVITVVTDTRTTQSLPKGLR
RATRRAAAASGNKHENWLAAVLKEQNAFKFKASSGSSKPVSSNSSTESGT

>gi568815588r:17490367_17717339|GENSCAN_predicted_CDS_3|1053_bp
atgcagagagcaagtcaaagagtcttggcaccaagtttcactgcccagaacgctcaggac
tggctgctgtgcgtttcaaacatgacagtcattttaggcgccataatccttaattgtgta
gatagtgtcaaaactggattaaaggatgcccagatgatgtctactgcttggtatgtggag
ggaaaaagcattccgtcacagaaatcttctgtgttgaagattgttgtggcaccatctgat
cagttgccagtgaatattaaacaggaagaaaaatgtgaaaaggagagagactggctaggc
ctcccagcctacatctttctcctgtgctggatgcttgctgtctttgaacatcagactcca
agttcttcagttttgagactcagactagctctccttactcctcagcttgcagacagccta
ttgtgggatcttgtgatcataaacgacaaatacagtccccctctttgtctcctctccaca
tcaatagcacaatactacagtgagacattcccaaatcctccatcctggaatcctagtgtc
tcaaaaacagaggtgattctgggctactgtgtatggttgtgcaggatgtgtactgcacaa
ctctacggagtcccattcacactgtggtctataggaatggtgctcacaactgcacggctg
tattcagcagccctggagctgctccatggtgaaggagtaggagtcggtctcccagaaggt
ggaatcgatctcccaaaaggagaagtccctccctgcatcgagaaaggcatgggagcaaga
gtccaagacttcaccgcagcaggtcccgagattggcagcacagatcccattccaagtccc
caggtcatcactgtagtcacagacacaagaaccactcaaagtctcccgaaaggtcttaga
agagccacgagaagagccgcagcagcaagtggtaataaacatgaaaactggttagcagca
gttttgaaagaacagaatgcattcaaatttaaggcttcttctgggtcatcaaagccagtt
tcatcaaacagttcaacagagagtggcacttaa

>gi568815588r:17490367_17717339|GENSCAN_predicted_peptide_4|200_aa
MGRLTEAAAAGSGSRAAGWAGSPPTLLPLSPTSPRCAATMASSDEDGTNGGASEAGEDRE
APGERRRLGVLATAWLTFYDIAMTAGVISYETAKLVSKVVIPFYLPSRNEWDFPLVHILA
NPWWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLESKTLSLKNSDDDDDDDND
DEEDDHAVLRTLVEKVFSIL

>gi568815588r:17490367_17717339|GENSCAN_predicted_CDS_4|603_bp
atggggcgcctgacggaagcggcggcagcgggcagcggctctcgggctgcaggctgggca
gggtcccctcccacgctcctgccgctgtctcccacgtcccccaggtgcgcggccaccatg
gcgtccagcgacgaggacggcaccaacggcggcgcctcggaggccggcgaggaccgggag
gctcccggcgagcggaggcgcctgggggtcttggccaccgcctggctcaccttctacgac
atcgccatgaccgcgggcgtaatttcttatgaaaccgccaaactggtttccaaagtggtt
atacccttttatcttccctctcgcaatgaatgggacttcccattggtgcacatccttgcc
aacccttggtggttggttctagctattgccatggtacgtttttatatggaaaaaggaaca
cacagaggtttatataaaagtattcagaagacacttaaatttttccagacatttgccttg
cttgagagcaagaccctgtctctgaaaaatagtgatgatgatgatgatgatgataacgat
gatgaggaagatgatcatgctgtactcagaactttggttgagaaagtcttctctatactg
tag

>gi568815588r:17490367_17717339|GENSCAN_predicted_peptide_5|700_aa
MAYGASEAIGQHQSSAAKPRRSQSESLGPELQGLGEWLPGVFHPTSSSDSRAVERESPGT
PRHAAEMPLFATNPFDQDVGQLRIQLVTPESFPDYCSKGFLSSNVIDGLGQVYFTPYWFY
ATVLFRRKNSSKGRKAEKEMKQVSEQEWKFIKKLYSRKERKVPLEEIQVGDLKKKATSEM
NTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIF
HLEVCSRDFASEVSNVLNKGHPKVCEKLKALMVEWTDEFKNDPQLSLISAMIKNLKEQGV
TFPAIGSQAAEQAKASPALVAKDPGTVANKKEEEDLAKAIELSLKEQRQQSTTLSTLYPS
TSSLLTNHQHEGRKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQGIGLFP
SNFVTADLTAEPEMIKTEKKTVQFSDDVQVETIEPEPEPAFIDEDKMDQLLQMLQSTDPS
DDQPDLPELLHLEAMCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNEDPM
YSMYAKLQNQPYYMQSSGVSGSQVYAGPPPSGAYLVAGNAQMSHLQSYSLPPEQLSSLSQ
AVVPPSANPALPSQQTQAAYPNTMVSSVQGNTYPSQAPVYSPPPAATAAAATADVTLYQN
AGPNMPQVPNYNLTSSTLPQPGGSQQPPQPQQPYSQKALL

>gi568815588r:17490367_17717339|GENSCAN_predicted_CDS_5|2103_bp
atggcctatggggcttccgaggcgatcgggcagcatcagtcttcagccgctaagccgaga
aggagtcagtcagagagccttgggccagagttgcaggggctcggggagtggctgccagga
gtcttccatcctacgtcgagctctgactcccgtgctgtcgagagggagtccccggggaca
cctcggcacgcagcggagatgcctctttttgccaccaatcccttcgatcaggatgttggc
caactcagaatccaacttgttacacctgagtcatttcctgattactgtagcaaagggttt
ctcagtagcaacgttattgacggtttgggccaggtgtatttcactccttattggttttat
gccactgtgctcttcagaagaaagaattcatctaaggggcgtaaggcagaaaaagagatg
aagcaagtttcagagcaggagtggaagtttattaaaaagctttacagcaggaaagaaagg
aaagtgcccttggaagaaatccaagtgggtgacttgaagaagaaagcaaccagcgagatg
aatactgctgaggactggggcctcattttggatatctgtgataaagttggtcagtctcgc
actggacctaaggattgtcttcggtctattatgagaagagtgaaccacaaagatcctcac
gttgctatgcaggctttgactcttctaggagcatgtgtatcaaactgtggcaaaattttt
catttagaagtatgttcaagagattttgctagtgaagtaagcaacgtattaaataagggt
catcctaaagtatgtgaaaaattaaaggctcttatggttgaatggacagatgaatttaag
aatgatccacagcttagtctaatatcagcaatgattaagaaccttaaggaacaaggagtt
acgttcccagctattggctctcaggctgcagaacaagcaaaagcaagcccagctcttgta
gccaaggatcctggtactgtggctaacaaaaaagaagaagaagatttagcaaaagccatt
gagttgtctctcaaggaacaaaggcagcagtcaaccaccctttccactttgtatccaagc
acatccagtctcttaactaaccaccaacatgaaggccgaaaagttcgtgctatatatgac
tttgaagctgctgaagacaatgaacttacttttaaagctggagaaattattacagttctt
gatgacagtgatcctaactggtggaaaggtgaaacccatcaaggcatagggttatttcct
tctaattttgtgactgcagatctcactgctgaaccagaaatgattaaaacagagaagaag
acggtacaatttagtgatgatgttcaggtagagacaatagaaccagagccggaaccagcc
tttattgatgaagataaaatggaccagttgctacagatgctgcaaagtacagaccccagt
gatgatcagccagacctaccagagctgcttcatcttgaagcaatgtgtcaccagatggga
cctctcattgatgaaaagctggaagatattgatagaaaacattcagaactctcagaactt
aatgtgaaagtgatggaggccctttccttatataccaagttaatgaacgaagatccgatg
tattccatgtatgcaaagttacagaatcagccatattatatgcagtcatctggtgtttct
ggttctcaggtgtatgcagggcctcctccaagtggtgcctacctggttgcagggaacgcg
cagatgagccacctccagagctacagtcttcccccggagcagctgtcttctctcagccag
gcagtggtcccaccatccgcaaacccagcccttcctagtcagcagactcaggccgcttac
ccaaatacaatggtcagttccgttcaaggaaacacatatcccagccaggcgccagtatat
agtcctcctcctgccgctactgctgctgctgcaactgccgatgtcactctgtaccagaat
gcaggacctaatatgccccaggtgccaaactataacttaacatcatcaactctgcctcag
cccggaggcagccaacagccacctcagccacagcaaccatattctcagaaggctctgcta
tag