GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:34:30

Sequence gi568815588f:17129423_17337268 : 207846 bp : 39.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5888   5946   59  1  2   67   87    53 0.263   3.93
 1.02 Intr +   8548   8673  126  1  0   44   92    82 0.219   3.07
 1.03 Intr +  15043  15101   59  1  2   59   89    52 0.068   0.01
 1.04 Term +  18154  18290  137  2  2  111   42    40 0.090  -1.10
 1.05 PlyA +  18772  18777    6                               1.05

 2.05 PlyA -  19475  19470    6                              -0.45
 2.04 Term -  19718  19618  101  0  2  122   28   107 0.970   5.41
 2.03 Intr -  24214  24085  130  1  1   97   88    93 0.999   9.55
 2.02 Intr -  25312  25255   58  0  1   76   79    43 0.995   0.17
 2.01 Init -  28356  28019  338  0  2   54   73   278 0.564  19.70
 2.00 Prom -  30070  30031   40                              -3.05

 3.00 Prom +  32642  32681   40                              -2.75
 3.01 Init +  34672  35526  855  0  0   43   86   338 0.094  23.77
 3.02 Intr +  67365  67499  135  2  0   47   83    89 0.011   4.14
 3.03 Intr +  85568  85671  104  1  2   41  119    51 0.015   1.55
 3.04 Intr +  86107  86270  164  1  2   17   98   108 0.572   3.40
 3.05 Intr +  90840  90930   91  1  1   52   94    65 0.245   1.63
 3.06 Intr +  97565  97616   52  2  1   91   81    72 0.534   4.79
 3.07 Intr +  98947  98981   35  0  2   96   87    40 0.531   0.80
 3.08 Intr +  99877 100563  687  1  0   39   72   833 0.346  66.53
 3.09 Intr + 101228 101288   61  2  1   40   72    34 0.691  -5.18
 3.10 Intr + 104165 104260   96  1  0   83   88   142 0.999  12.99
 3.11 Intr + 104348 104509  162  1  0  123   97   277 0.998  31.35
 3.12 Intr + 105271 105396  126  0  0   72   84   260 0.980  23.96
 3.13 Intr + 105747 105967  221  2  2  104   91   373 0.732  35.38
 3.14 Intr + 124450 124563  114  1  0   47   97    49 0.030   0.34
 3.15 Intr + 135664 135776  113  1  2   86   64    55 0.121   2.00
 3.16 Intr + 138853 138988  136  2  1   -4   71   158 0.193   3.61
 3.17 Intr + 139828 139886   59  1  2   78   78    46 0.060   0.21
 3.18 Term + 146221 146306   86  2  2   65   33   154 0.099   4.44
 3.19 PlyA + 146877 146882    6                               1.05

 4.00 Prom + 151403 151442   40                              -5.75
 4.01 Sngl + 152516 153028  513  1  0   49   42   430 0.958  30.29
 4.02 PlyA + 155128 155133    6                               1.05

 5.00 Prom + 182743 182782   40                              -3.65
 5.01 Init + 182867 183001  135  1  0   69   59    66 0.661   1.99
 5.02 Term + 184756 184911  156  0  0   23   42   148 0.821   0.65
 5.03 PlyA + 185108 185113    6                               1.05

 6.05 PlyA - 186021 186016    6                               1.05
 6.04 Term - 191924 191456  469  1  1   64   41   313 0.957  17.66
 6.03 Intr - 193735 193643   93  0  0   72  100    72 0.961   4.96
 6.02 Intr - 197704 197592  113  1  2   42   82    82 0.610   1.26
 6.01 Intr - 202130 201986  145  1  1  118   89    55 0.661   7.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:17129423_17337268|GENSCAN_predicted_peptide_1|126_aa
MVMFAFYKQPCGAMSETQSWGMFFYLECNNPYVIFLLGQLNLSGGLDQCGSHKNEERVEM
QRKNEILEALGVKCGVLEGDFRWLISLRIMYSRFIHVTAYVRISFLRKAGTIPLHARNTI
PASIHG

>gi568815588f:17129423_17337268|GENSCAN_predicted_CDS_1|381_bp
atggtcatgtttgcattttacaagcaaccctgtggagccatgtctgagacccagagttgg
gggatgttcttttatcttgagtgcaataatccttatgtgatatttctgctaggccagctg
aatttatctggaggactggatcaatgtgggagtcataaaaatgaggagagggttgagatg
cagaggaaaaatgagattttggaagctttaggagtcaagtgtggtgtacttgagggagac
ttcaggtggcttatttcacttcgcataatgtactcaaggttcatccatgtcaccgcatat
gtcagaatttccttcctgcggaaggctggtactattccactgcatgcacggaacacaatt
cctgcatccattcatgggtga

>gi568815588f:17129423_17337268|GENSCAN_predicted_peptide_2|208_aa
MEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHRKNQ
QDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSYIEG
TGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGFPEK
ITVKQRYRLLGNSLNVHVVAKLIKILYE

>gi568815588f:17129423_17337268|GENSCAN_predicted_CDS_2|627_bp
atggagttccccaaaattgaatctgtacatccacaaaaatatgcaatggatgtagaaaat
aaaattcaagaaaagaacgttgaaccaaatattagctttgatggcagcatacagtgttct
ggaaaagatgccattctttttaagcttgaaactgcagaagaaattcacaggaaaaatcaa
caagatagtgatctctctgtgaaaatgctaaaagattttcttgaagatgacactgacgtg
aaccagtatcttttaccaccaaagtcattgctgcgatatgctcttctgttagacattgtt
cagcccacttgtagaaggtccgtgtgctttaccaaaggatatggaagctacatagaaggg
acagggtctgtgttacagactgcagaggatgtgcaggttgagaatatctacaaatccctt
accaatttgtcacaagaagaacagataacaaagctgttaatacttaaactgcgatatttc
actcctaaagaaatagcaaatctccttggatttcctccagagttcggatttcctgagaag
ataacagtgaaacagcgttatcgcctacttggaaatagtctcaacgtgcatgtagtagct
aaactaatcaaaatcttatatgaataa

>gi568815588f:17129423_17337268|GENSCAN_predicted_peptide_3|1098_aa
MNIDAKIHNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNTSKSINVIQHINRTNDKNHM
IISINAEKTFDKTQQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANIIPNGQKLEAFPLKT
GTRQGCPLSSLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLEKPIISA
QNLLKLTSNFSKVSGYKINVQKSQAFLYTNKRQTESQIMSELPFTIASKRIKYLGIQLTR
DVKDLFKKIYQSLLNDIKEDTNKWKNIPCSGIGRINIVKMATLPKCLPTTCIHMIRPQFR
VSSVRRDFNSEVAMEELKQTRKPIFLAREVRTLTSFPIFQPYGFLILRGHRQEQFTSTVV
LRITWTKGILVIQVNPWLTTLEAGISKAPDKPWNPSQVAPALPQKPAQVLGLWLAFSVNR
TWMQLETIILSKLMQEQKSKYCMLSLISGSESVSKRRIALGSALHVEGPTAHSKAMAQLS
PRQRRSRAPTTHTHRALVRLFSGSQSAPPPPPRPSPPSAAMSTRSVSSSSYRRMFGGPGT
ASRPSSSRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGVYATRSSAVRLRSSVPGVRLL
QDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKG
QGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAE
NTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQAQIQEQHVQIDVDV
SKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYR
RQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHL
REYQDLLNVKMALDIEIATYRKLLEGEESRGAIVLLQISGYYNQLRACVQKSPKRSRDST
YPSEQLLSRQTKFYDSDLRVNSSPSMDSMDLMYLILWFLEIHFIRSQKYNTAFGSVIHPL
WVYLEPFDPAELWPSLLQNEEECPLGPNGTREAQQLGRTQFPPYFDTPEITVSLQFGTCK
RLADLEDVSKASTQAHRK

>gi568815588f:17129423_17337268|GENSCAN_predicted_CDS_3|3297_bp
atgaacatcgatgcaaaaatccacaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaac
acaagcaaatcaataaatgtaatccagcatataaacagaaccaacgacaaaaaccacatg
attatctcaataaatgcagaaaagacctttgacaaaactcaacaacccttcatgctaaaa
actctcaataaattaggtattgatgggacatatctcaaaataataagagctatctatgac
aaacccacagccaatatcataccgaatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcatcacttctattcaacatagtgttggaagttctg
gccagggcaatcaggcaggagaaagaaataaagggcattcagttaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgattgtatatctagaaaaacccatcatctcggcc
caaaatctccttaagctgacaagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcttatacaccaataaaagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagg
gatgtgaaggacctcttcaagaagatctaccaatcactgctcaatgacataaaagaggat
acaaacaaatggaagaacattccatgctcagggataggaagaatcaatattgtgaaaatg
gccacattgcccaagtgtctaccaaccacctgcatccacatgataagacctcagtttaga
gttagcagtgtgaggagagacttcaattcagaggtagcaatggaagaacttaaacaaacg
aggaaacccatctttctggcaagggaggtgcgaacactcaccagtttccccattttccaa
ccctatggttttcttattctacgtggccacagacaggaacaattcactagcacagtggtt
ctcagaatcacctggacaaaaggtatactagtgattcaggtaaatccttggctgaccaca
ctggaagctggcatctccaaggctcccgacaaaccctggaacccaagccaagttgctcct
gcactaccccagaagccagctcaggtccttggcttgtggcttgctttttctgtcaacaga
acatggatgcagctggagaccatcatccttagcaaactaatgcaggaacagaaaagcaaa
tactgcatgttgtcacttataagtgggagtgagtcagtcagcaagcgtcgcattgccctg
ggatcggcactgcacgtagaaggcccgaccgcacacagcaaggcgatggcccagctgtcc
ccgcgccagagacgcagccgcgctcccaccacccacacccaccgcgccctcgttcgcctc
ttctccgggagccagtccgcgccaccgccgccgcccaggccatcgccaccctccgcagcc
atgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggcccgggcacc
gcgagccggccgagctccagccggagctacgtgactacgtccacccgcacctacagcctg
ggcagcgcgctgcgccccagcaccagccgcagcctctacgcctcgtccccgggcggcgtg
tatgccacgcgctcctctgccgtgcgcctgcggagcagcgtgcccggggtgcggctcctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctgaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaataagatcctgctggccgagctcgagcagctcaagggc
caaggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcag
gtggaccagctaaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctggccgag
gacatcatgcgcctccgggagaaattgcaggaggagatgcttcagagagaggaagccgaa
aacaccctgcaatctttcagacaggatgttgacaatgcgtctctggcacgtcttgacctt
gaacgcaaagtggaatctttgcaagaagagattgcctttttgaagaaactccacgaagag
gaaatccaggagctgcaggctcagattcaggaacagcatgtccaaatcgatgtggatgtt
tccaagcctgacctcacggctgccctgcgtgacgtacgtcagcaatatgaaagtgtggct
gccaagaacctgcaggaggcagaagaatggtacaaatccaagtttgctgacctctctgag
gctgccaaccggaacaatgacgccctgcgccaggcaaagcaggagtccactgagtaccgg
agacaggtgcagtccctcacctgtgaagtggatgcccttaaaggaaccaatgagtccctg
gaacgccagatgcgtgaaatggaagagaactttgccgttgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaatatgaaggaggaaatggctcgtcacctt
cgtgaataccaagacctgctcaatgttaagatggcccttgacattgagattgccacctac
aggaagctgctggaaggcgaggagagcagaggggccatagtgttgcttcagatctctggg
tactataatcagttgagagcctgtgttcaaaagtcccccaaaaggtctagagattccact
taccccagtgaacagttgctcagtaggcagactaaattctatgactctgatctgagggtt
aacagtagtccatctatggattctatggacttgatgtatcttatactgtggttcctggaa
attcattttatcaggagccagaaatacaacacagcttttggctctgtcattcatccactg
tgggtctacctggagccatttgatcctgctgagctgtggccttcccttttgcaaaatgaa
gaagaatgcccccttgggccaaatgggacaagagaagcccagcagcttggtaggacccag
ttcccaccttattttgatactccagaaataactgtttctctgcagtttggcacctgcaag
cggttagcagacctggaggatgtcagcaaagcctctacccaggcccacaggaagtag

>gi568815588f:17129423_17337268|GENSCAN_predicted_peptide_4|170_aa
MWNNFGNGVTGRDWNNLEGSEEERKMWESLELPKDLLNGFDQNADSDVNNEVQAEVVSDE
DEELVGNWNKGDPRYALAKRLAAFCPCTRDLWNFELDRDDLGYLTEEILKQQSIQEVTEH
KSLENLQPDNTREKKNLFSGEKFKPAAEICISNEGPNVNHQANGGDVSRA

>gi568815588f:17129423_17337268|GENSCAN_predicted_CDS_4|513_bp
atgtggaataactttggaaatggggtaacaggcagagattggaacaatttggagggctca
gaagaagaaaggaagatgtgggaaagtttggaacttcctaaagacttgttaaatggtttt
gaccaaaatgctgatagtgatgtgaacaatgaagtccaggctgaggtggtctcagatgaa
gatgaggaacttgttgggaactggaataaaggtgaccctcgctatgctttagcaaagaga
ctggcagcattttgcccctgcactagagatctgtggaactttgaacttgacagagatgac
ttagggtatctgacagaagaaattcttaaacagcaaagcattcaagaggtgacagaacat
aaaagtttggaaaatttgcagcctgacaatacaagagaaaagaaaaatctattttctggg
gagaaattcaagccagctgcagaaatttgcataagtaacgaggggccaaatgttaatcac
caagccaatgggggagatgtctccagggcataa

>gi568815588f:17129423_17337268|GENSCAN_predicted_peptide_5|96_aa
MESYAAIKRNAIMSFAGTWMKLEAIALSKLTQEQKAKHHMFSLIGIKEYYEQLYYDKFYN
SDEEDKFPEEHKLPHLTQEEINRLNDPASIKEIVQY

>gi568815588f:17129423_17337268|GENSCAN_predicted_CDS_5|291_bp
atggaatcctatgcagccataaaaaggaatgcgatcatgtcctttgcagggacatggatg
aagctggaggccattgccctcagcaaactaacacaggaacagaaagccaaacaccacatg
ttctcacttataggtataaaggaatattatgaacaactttattacgataaattctacaac
tctgatgaagaagataaatttcctgaagaacacaaactaccacatctcactcaagaagaa
ataaaccgtctgaatgatcctgcatctattaaagaaattgttcaatattaa

>gi568815588f:17129423_17337268|GENSCAN_predicted_peptide_6|273_aa
XAKLASCCDAVQNFVVSQNNTPVGTNMSYEVESKKEIPIKKNIFHMFPVSQPFVDYPYNQ
CAVVGNGGILNKSLCGTEIDKSDFVFRCNLPPTTGDVSKDVGSKTNLVTINPSIITLKYG
NLKEKKALFLEDIATYGDAFFLLPAFSFRANTGTSFKVYYTLEESKARQKVLFFHPKYLK
DLALFWRTKGVTAYRLSTGLMITSVAVELCKNVKLYGFWPFSKTVEDIPVSHHYYDNKLP
KHGFHQMPKEYSQILQLHMKGILKLQFSKCEVA

>gi568815588f:17129423_17337268|GENSCAN_predicted_CDS_6|822_bp
nnagccaaacttgcttcctgctgtgatgctgttcaaaactttgttgtttctcagaataac
actccagttgggactaatatgagttacgaggtggaaagcaaaaaagaaatcccaattaag
aagaacatttttcatatgtttccagtgtcccagccttttgtggactacccttataatcag
tgtgcagtggtcggaaatgggggaattctgaataagtctctctgtggaactgaaatagat
aaatccgacttcgtttttaggtgtaacctacccccaaccacaggagatgttagtaaagat
gttggcagtaaaacaaatcttgtgactataaatccaagcatcataactctgaaatatggg
aacttaaaggaaaaaaaagccctatttctggaggacattgcaacctatggagatgcattt
tttcttctgccagcattttccttcagggccaacacgggtacctctttcaaagtatactac
acgctcgaagagtctaaagcaagacaaaaggttctatttttccatcccaagtacctgaaa
gatctggcccttttctggagaactaaaggtgtgactgcataccgcttgtccaccggcttg
atgatcacaagtgttgcagtggaactgtgtaaaaatgtgaagctgtatggattctggccc
ttctctaaaactgtagaagacatacctgtcagccatcactattatgacaacaagctacct
aaacatggtttccatcagatgcccaaagaatacagccagatcctccaacttcacatgaaa
ggaatcctcaaactgcaatttagcaaatgtgaagtcgcctaa