Result of FASTA (omim) for
pF1KE1911
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1911, 445 aa
1>>>pF1KE1911 445 - 445 aa - 445 aa
Library: /omim/omim.rfq.tfa
64369986 residues in 92320 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5966+/-0.000358; mu= 16.6176+/- 0.023
mean_var=74.6496+/-14.871, 0's: 0 Z-trim(113.8): 115 B-trim: 444 in 1/53
Lambda= 0.148443
statistics sampled from 24143 (24264) to 24143 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.263), width: 16
Scan time: 4.190
The best scores are: opt bits E(92320)
NP_006079 (OMIM: 602660,617879) tubulin beta-4B ch ( 445) 2992 650.2 3.3e-186
NP_006078 (OMIM: 128101,602662,612438) tubulin bet ( 444) 2944 640.0 4.1e-183
NP_001276058 (OMIM: 128101,602662,612438) tubulin ( 444) 2944 640.0 4.1e-183
NP_001276056 (OMIM: 128101,602662,612438) tubulin ( 489) 2944 640.0 4.4e-183
NP_001276052 (OMIM: 128101,602662,612438) tubulin ( 495) 2944 640.0 4.5e-183
NP_821133 (OMIM: 156610,191130,615771) tubulin bet ( 444) 2929 636.8 3.8e-182
NP_821080 (OMIM: 610031,612850) tubulin beta-2B ch ( 445) 2929 636.8 3.8e-182
NP_001060 (OMIM: 615101,615763) tubulin beta-2A ch ( 445) 2910 632.7 6.4e-181
NP_006077 (OMIM: 600638,602661,614039) tubulin bet ( 450) 2817 612.8 6.4e-175
NP_001280141 (OMIM: 156610,191130,615771) tubulin ( 464) 2807 610.6 2.9e-174
NP_817124 (OMIM: 616768,616780) tubulin beta-8 cha ( 444) 2770 602.7 6.7e-172
NP_001290453 (OMIM: 615103,617732) tubulin beta-6 ( 446) 2754 599.3 7.3e-171
NP_115914 (OMIM: 615103,617732) tubulin beta-6 cha ( 446) 2754 599.3 7.3e-171
NP_001280143 (OMIM: 156610,191130,615771) tubulin ( 400) 2554 556.4 5.2e-158
NP_001276060 (OMIM: 128101,602662,612438) tubulin ( 372) 2455 535.2 1.2e-151
NP_001276059 (OMIM: 128101,602662,612438) tubulin ( 372) 2455 535.2 1.2e-151
NP_001280145 (OMIM: 156610,191130,615771) tubulin ( 372) 2448 533.7 3.3e-151
NP_001280144 (OMIM: 156610,191130,615771) tubulin ( 372) 2448 533.7 3.3e-151
NP_110400 (OMIM: 612901,613112) tubulin beta-1 cha ( 451) 2434 530.8 3.1e-150
NP_001184110 (OMIM: 600638,602661,614039) tubulin ( 378) 2375 518.1 1.7e-146
XP_011517761 (OMIM: 616768,616780) tubulin beta-8 ( 372) 2339 510.4 3.6e-144
NP_001290456 (OMIM: 615103,617732) tubulin beta-6 ( 374) 2333 509.1 8.7e-144
NP_001297244 (OMIM: 615101,615763) tubulin beta-2A ( 360) 2291 500.1 4.3e-141
XP_016883574 (OMIM: 612901,613112) tubulin beta-1 ( 429) 2283 498.4 1.6e-140
NP_001290457 (OMIM: 615103,617732) tubulin beta-6 ( 381) 2194 479.3 8.1e-135
NP_001290455 (OMIM: 615103,617732) tubulin beta-6 ( 409) 2185 477.4 3.3e-134
XP_016871681 (OMIM: 616768,616780) tubulin beta-8 ( 332) 2061 450.8 2.7e-126
XP_016871682 (OMIM: 616768,616780) tubulin beta-8 ( 332) 2061 450.8 2.7e-126
NP_001290459 (OMIM: 615103,617732) tubulin beta-6 ( 300) 1840 403.4 4.4e-112
NP_001290458 (OMIM: 615103,617732) tubulin beta-6 ( 300) 1840 403.4 4.4e-112
XP_011517762 (OMIM: 616768,616780) tubulin beta-8 ( 291) 1679 369.0 1e-101
NP_006073 (OMIM: 602530) tubulin alpha-1B chain [H ( 451) 1288 285.3 2.4e-76
NP_001257328 (OMIM: 602529,611603) tubulin alpha-1 ( 451) 1280 283.6 7.8e-76
NP_006000 (OMIM: 602529,611603) tubulin alpha-1A c ( 451) 1280 283.6 7.8e-76
NP_005991 (OMIM: 191110,616208) tubulin alpha-4A c ( 448) 1272 281.9 2.5e-75
NP_525125 (OMIM: 617878,617928) tubulin alpha-3D c ( 450) 1263 280.0 9.7e-75
NP_005992 (OMIM: 602528) tubulin alpha-3C chain [H ( 450) 1263 280.0 9.7e-75
NP_061816 (OMIM: 605742,613180) tubulin alpha-8 ch ( 449) 1251 277.4 5.7e-74
NP_001265481 (OMIM: 191110,616208) tubulin alpha-4 ( 433) 1223 271.4 3.6e-72
NP_001257329 (OMIM: 602529,611603) tubulin alpha-1 ( 416) 1176 261.3 3.7e-69
NP_001180343 (OMIM: 605742,613180) tubulin alpha-8 ( 383) 1086 242.0 2.2e-63
NP_001061 (OMIM: 191135,615412) tubulin gamma-1 ch ( 451) 1013 226.4 1.3e-58
NP_057521 (OMIM: 605785) tubulin gamma-2 chain iso ( 451) 1003 224.3 5.6e-58
XP_024306672 (OMIM: 191135,615412) tubulin gamma-1 ( 538) 847 190.9 7.4e-48
XP_024306463 (OMIM: 605785) tubulin gamma-2 chain ( 587) 846 190.7 9.2e-48
NP_001280142 (OMIM: 156610,191130,615771) tubulin ( 242) 834 187.9 2.6e-47
XP_016860313 (OMIM: 191110,616208) tubulin alpha-4 ( 295) 773 174.9 2.7e-43
NP_001307438 (OMIM: 605785) tubulin gamma-2 chain ( 460) 624 143.1 1.5e-33
NP_001290454 (OMIM: 615103,617732) tubulin beta-6 ( 104) 563 129.7 3.9e-30
XP_024306467 (OMIM: 605785) tubulin gamma-2 chain ( 357) 530 122.9 1.4e-27
>>NP_006079 (OMIM: 602660,617879) tubulin beta-4B chain (445 aa)
initn: 2992 init1: 2992 opt: 2992 Z-score: 3464.6 bits: 650.2 E(92320): 3.3e-186
Smith-Waterman score: 2992; 100.0% identity (100.0% similar) in 445 aa overlap (1-445:1-445)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEEGEFEEEAEEEVA
:::::::::::::::::::::::::
NP_006 EYQQYQDATAEEEGEFEEEAEEEVA
430 440
>>NP_006078 (OMIM: 128101,602662,612438) tubulin beta-4A (444 aa)
initn: 2893 init1: 2893 opt: 2944 Z-score: 3409.1 bits: 640.0 E(92320): 4.1e-183
Smith-Waterman score: 2944; 98.4% identity (99.8% similar) in 445 aa overlap (1-445:1-444)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
NP_006 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
NP_006 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
NP_006 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
:::::::::::::::::::::::::::::::.::.:::::::::::::::::::::::::
NP_006 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEEGEFEEEAEEEVA
:::::::::::: ::::::::::::
NP_006 EYQQYQDATAEE-GEFEEEAEEEVA
430 440
>>NP_001276058 (OMIM: 128101,602662,612438) tubulin beta (444 aa)
initn: 2893 init1: 2893 opt: 2944 Z-score: 3409.1 bits: 640.0 E(92320): 4.1e-183
Smith-Waterman score: 2944; 98.4% identity (99.8% similar) in 445 aa overlap (1-445:1-444)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
NP_001 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
NP_001 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
NP_001 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
:::::::::::::::::::::::::::::::.::.:::::::::::::::::::::::::
NP_001 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEEGEFEEEAEEEVA
:::::::::::: ::::::::::::
NP_001 EYQQYQDATAEE-GEFEEEAEEEVA
430 440
>>NP_001276056 (OMIM: 128101,602662,612438) tubulin beta (489 aa)
initn: 2893 init1: 2893 opt: 2944 Z-score: 3408.5 bits: 640.0 E(92320): 4.4e-183
Smith-Waterman score: 2944; 98.4% identity (99.8% similar) in 445 aa overlap (1-445:46-489)
10 20 30
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGI
::::::::::::::::::::::::::::::
NP_001 AVSAASSTLAAAAAPRARATAAASTLSATAMREIVHLQAGQCGNQIGAKFWEVISDEHGI
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE1 DPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
NP_001 DPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE1 VFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
NP_001 VFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE1 LISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI
200 210 220 230 240 250
220 230 240 250 260 270
pF1KE1 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF
260 270 280 290 300 310
280 290 300 310 320 330
pF1KE1 APLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM
320 330 340 350 360 370
340 350 360 370 380 390
pF1KE1 LNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFR
:.::.::::::::::::::::::::::::::::.::::::::::::::::::::::::::
NP_001 LSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFR
380 390 400 410 420 430
400 410 420 430 440
pF1KE1 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEAEEEVA
:::::::::::::::::::::::::::::::::::::::::: ::::::::::::
NP_001 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE-GEFEEEAEEEVA
440 450 460 470 480
>>NP_001276052 (OMIM: 128101,602662,612438) tubulin beta (495 aa)
initn: 2893 init1: 2893 opt: 2944 Z-score: 3408.4 bits: 640.0 E(92320): 4.5e-183
Smith-Waterman score: 2944; 98.4% identity (99.8% similar) in 445 aa overlap (1-445:52-495)
10 20 30
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGI
::::::::::::::::::::::::::::::
NP_001 AVSAASSTLAAAAAPRARATAAASTLSATAMREIVHLQAGQCGNQIGAKFWEVISDEHGI
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE1 DPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
NP_001 DPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE1 VFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
NP_001 VFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE1 LISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI
210 220 230 240 250 260
220 230 240 250 260 270
pF1KE1 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF
270 280 290 300 310 320
280 290 300 310 320 330
pF1KE1 APLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM
330 340 350 360 370 380
340 350 360 370 380 390
pF1KE1 LNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFR
:.::.::::::::::::::::::::::::::::.::::::::::::::::::::::::::
NP_001 LSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFR
390 400 410 420 430 440
400 410 420 430 440
pF1KE1 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEAEEEVA
:::::::::::::::::::::::::::::::::::::::::: ::::::::::::
NP_001 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE-GEFEEEAEEEVA
450 460 470 480 490
>>NP_821133 (OMIM: 156610,191130,615771) tubulin beta ch (444 aa)
initn: 2929 init1: 2929 opt: 2929 Z-score: 3391.7 bits: 636.8 E(92320): 3.8e-182
Smith-Waterman score: 2929; 97.7% identity (99.5% similar) in 443 aa overlap (1-443:1-443)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
::::::.:::::::::::::::::::::::::::::::::::::.::.::::::::::::
NP_821 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_821 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_821 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_821 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
NP_821 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_821 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
:::..:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_821 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEEGEFEEEAEEEVA
::::::::::::: .: ::::::
NP_821 EYQQYQDATAEEEEDFGEEAEEEA
430 440
>>NP_821080 (OMIM: 610031,612850) tubulin beta-2B chain (445 aa)
initn: 2929 init1: 2929 opt: 2929 Z-score: 3391.7 bits: 636.8 E(92320): 3.8e-182
Smith-Waterman score: 2929; 96.9% identity (99.3% similar) in 445 aa overlap (1-445:1-445)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
::::::.:::::::::::::::::::::::::::.:::::::::::::::::::::.:::
NP_821 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_821 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
:::.:::::::::::::::::::::::::::::::::::::::::::::.::::::::::
NP_821 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_821 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
NP_821 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
NP_821 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_821 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEEGEFEEEAEEEVA
::::::::::.:.:::::: :. :
NP_821 EYQQYQDATADEQGEFEEEEGEDEA
430 440
>>NP_001060 (OMIM: 615101,615763) tubulin beta-2A chain (445 aa)
initn: 2910 init1: 2910 opt: 2910 Z-score: 3369.7 bits: 632.7 E(92320): 6.4e-181
Smith-Waterman score: 2910; 96.4% identity (99.1% similar) in 445 aa overlap (1-445:1-445)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
::::::.:::::::::::::::::::::::::::.:::::::::::::::::::.:.:::
NP_001 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
:::.:::::::::::::::::::::::::::::::::::::::::::::.::::::::::
NP_001 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
NP_001 EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
NP_001 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
NP_001 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEEGEFEEEAEEEVA
::::::::::.:.:::::: :. :
NP_001 EYQQYQDATADEQGEFEEEEGEDEA
430 440
>>NP_006077 (OMIM: 600638,602661,614039) tubulin beta-3 (450 aa)
initn: 2817 init1: 2817 opt: 2817 Z-score: 3262.0 bits: 612.8 E(92320): 6.4e-175
Smith-Waterman score: 2817; 93.2% identity (98.2% similar) in 443 aa overlap (1-443:1-443)
10 20 30 40 50 60
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
::::::.:::::::::::::::::::::::::.:.: ::::::::::.::::::.. :::
NP_006 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
:::.::::::::::::::: ::..::::::.:::::::::::::::::::::::::::::
NP_006 PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
::: :.::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_006 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
::::::::.::::::::::::::::::::::::::::.:::::::::::::::::::: :
NP_006 EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_006 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
::::::::::::::.:::::::::::::::: .:.:::::::::::::::.:::::::::
NP_006 AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
370 380 390 400 410 420
430 440
pF1KE1 EYQQYQDATAEEEGEFEEEAEEEVA
:::::::::::::::. :. :::
NP_006 EYQQYQDATAEEEGEMYEDDEEESEAQGPK
430 440 450
>>NP_001280141 (OMIM: 156610,191130,615771) tubulin beta (464 aa)
initn: 2807 init1: 2807 opt: 2807 Z-score: 3250.3 bits: 610.6 E(92320): 2.9e-174
Smith-Waterman score: 2807; 97.9% identity (99.5% similar) in 425 aa overlap (19-443:39-463)
10 20 30 40
pF1KE1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERIN
::::::::::::::::::::::::::.::.
NP_001 ANWDPSRSGVRDHPGQQSETLPHATFLQKIKFWEVISDEHGIDPTGTYHGDSDLQLDRIS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 VYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE1 GAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE1 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHL
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE1 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPE
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE1 LTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNN
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNN
310 320 330 340 350 360
350 360 370 380 390 400
pF1KE1 VKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF
:::::::::::::::..:::::::::::::::::::::::::::::::::::::::::::
NP_001 VKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF
370 380 390 400 410 420
410 420 430 440
pF1KE1 TEAESNMNDLVSEYQQYQDATAEEEGEFEEEAEEEVA
::::::::::::::::::::::::: .: ::::::
NP_001 TEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA
430 440 450 460
445 residues in 1 query sequences
64369986 residues in 92320 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Oct 24 21:44:04 2019 done: Thu Oct 24 21:44:04 2019
Total Scan time: 4.190 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]