GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:43:13

Sequence gi568815589r:114803934_115030303 : 226370 bp : 41.41% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.10 Intr -   1934   1870   65  0  2  135  115    43 0.028   9.22
 1.09 Intr -   2111   1957  155  1  2   53    1   198 0.083   6.39
 1.08 Intr -   5522   5321  202  0  1   38   61   168 0.359   6.52
 1.07 Intr -   7542   7444   99  1  0   68   95    91 0.700   6.96
 1.06 Intr -   9808   9570  239  0  2   63   85    77 0.421   1.24
 1.05 Intr -  13712  13639   74  2  2   99   66    76 0.716   3.79
 1.04 Intr -  15303  15087  217  2  1   50   68   162 0.796   7.98
 1.03 Intr -  24208  24116   93  0  0   88   73    54 0.266   2.06
 1.02 Intr -  31919  31474  446  2  2   62   93   194 0.821   8.57
 1.01 Init -  36022  35927   96  1  0   97   92    79 0.545   9.56
 1.00 Prom -  40580  40541   40                              -6.55

 2.03 PlyA -  41306  41301    6                               1.05
 2.02 Term -  41721  41499  223  2  1   85   54   157 0.026   7.41
 2.01 Init -  61709  61636   74  2  2   64   58   111 0.351   6.29
 2.00 Prom -  62285  62246   40                              -7.45

 3.00 Prom +  63366  63405   40                              -8.35
 3.01 Sngl +  66786  67250  465  2  0   77   48   324 0.874  23.19
 3.02 PlyA +  67670  67675    6                               1.05

 4.00 Prom +  67979  68018   40                              -1.45
 4.01 Init +  71696  71746   51  1  0   68   99    44 0.438   4.72
 4.02 Term +  72128  72211   84  1  0  114   42    40 0.219  -1.33
 4.03 PlyA +  74242  74247    6                               1.05

 5.07 PlyA -  74270  74265    6                               1.05
 5.06 Term -  79540  79430  111  1  0   59   47   104 0.366   0.98
 5.05 Intr -  81165  81004  162  0  0   16   27   149 0.399   0.85
 5.04 Intr -  84908  84783  126  2  0  110   74    44 0.787   5.16
 5.03 Intr - 101568 101391  178  2  1  107  110    23 0.829   5.40
 5.02 Intr - 101966 101895   72  1  0  102   86    42 0.801   3.00
 5.01 Init - 103395 103256  140  0  2   47   47   211 0.689  12.56
 5.00 Prom - 104271 104232   40                              -5.15

 6.07 PlyA - 104665 104660    6                              -0.45
 6.06 Term - 105390 105223  168  0  0   86   36   120 0.492   3.50
 6.05 Intr - 111135 110864  272  1  2   14   66   157 0.394   2.44
 6.04 Intr - 114205 114163   43  1  1  136   94    36 0.516   5.89
 6.03 Intr - 116349 116256   94  2  1   79   92    30 0.425   1.55
 6.02 Intr - 121135 121041   95  1  2   66   73    90 0.922   3.14
 6.01 Init - 126337 126176  162  1  0   67  127   189 0.750  18.82
 6.00 Prom - 126386 126347   40                              -3.75

 7.03 PlyA - 127522 127517    6                               1.05
 7.02 Term - 128787 128428  360  0  0   74   47   194 0.846   7.45
 7.01 Init - 130150 130094   57  1  0   81   81    48 0.962   4.76
 7.00 Prom - 139779 139740   40                              -6.65

 8.00 Prom + 139999 140038   40                              -5.85
 8.01 Init + 143322 143471  150  2  0   52   41   121 0.074   3.89
 8.02 Intr + 156743 156923  181  1  1   46   30   184 0.106   6.92
 8.03 Intr + 171264 172368 1105  1  1   46   53   327 0.008  12.98
 8.04 Intr + 184890 184934   45  0  0  120   78    20 0.077   0.81
 8.05 Intr + 185938 186210  273  1  0  138   50   219 0.713  18.83
 8.06 Term + 196222 196501  280  1  1   32   48   157 0.242   0.03
 8.07 PlyA + 197694 197699    6                               1.05

 9.07 PlyA - 199265 199260    6                               1.05
 9.06 Term - 217334 217224  111  2  0  143   32    87 0.990   6.18
 9.05 Intr - 220203 220040  164  1  2  104  109    99 0.996  12.37
 9.04 Intr - 221745 221626  120  1  0   52   32   102 0.583   0.55
 9.03 Intr - 222762 222601  162  1  0  102   92   359 0.932  36.73
 9.02 Intr - 225354 225199  156  1  0  113   -2   109 0.798   3.46
 9.01 Intr - 225523 225427   97  1  1   65   23   111 0.643   0.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 184890 184924   35  2  2  120   52    31 0.824  -1.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:114803934_115030303|GENSCAN_predicted_peptide_1|562_aa
MGDRGAMSSRAAGSCQRVHTNRAHQQGSRMPWVHSGWQQVNATLGQSFQRKEQAAIVDVS
QPSLMIPPGTKNTEATRVWSRSPANHSHPTEEWPDCKKKKQTENNNIDKNDLTKTPFKGQ
QPQKSKVDKPTNMWKIQHKNAENSKSQSTSSPPHDHNTSPARAQNWAEAEMAELTEVGFK
RMGTAPTYKCGYEVDEIMYSSWHCELPTIIKIGENGNPERKSGLCLEEHLDGEEEDPANC
KLAVWNLNSKDVSVSFLLFVQGELLGQLFSNLFQGERGQSVVPWPSTDTQCLLNEELSTN
STSGSLIASPKHPASPLLKPYLLLFPHICPWTYLMAPAQDPVGVLALTPAAYTFQREQST
VPATRNLGSTSAPALPLVSPFWVCFKIEGLCHCDDGATVKLLVPHTYLLLNICEGFFRVY
ALVSKWVSQTSGCSQHSKQDDLFKVKSEPATSPPITFQRTPTPLTTTSLPIKLSEEEAKS
YLDPGGHTRSQRCLQEQQEHGRGSGTELWGNSQCGNAARARQLQAQGQEQQRTLGSHLLP
GLTTYLLVSQLRAQGEACVQFQ

>gi568815589r:114803934_115030303|GENSCAN_predicted_CDS_1|1686_bp
atgggtgacaggggagccatgagcagcagggcagcagggagctgccagcgagtgcacacc
aacagggcacaccaacagggtagcaggatgccatgggtacattcaggctggcaacaggtc
aatgctaccctgggacagagcttccagaggaaggaacaggctgccattgttgatgtttca
cagccttcactgatgatacctccaggtacaaaaaacactgaggcaactagggtctggagc
agatccccagcaaaccacagccaccctacagaagagtggcctgactgtaaaaagaaaaaa
caaacagaaaacaacaacatcgacaaaaatgacctcacaaaaaccccattcaaaggtcaa
caacctcaaaaatctaaggtagataagcccacaaatatgtggaagattcaacacaaaaat
gctgaaaactcaaaaagccagagtacctcttctccaccacatgaccacaacacatctcca
gcaagagcacagaactgggctgaggctgagatggctgaattgacagaagtaggcttcaaa
agaatggggacagcacctacctacaagtgtggttatgaggttgatgagataatgtattcc
agctggcattgtgaactgccaaccattataaaaataggagaaaatggaaatccagaaagg
aaaagcggcttgtgtctcgaggaacatttggatggagaggaagaagaccctgcaaattgc
aagctggctgtctggaaccttaacagtaaagatgtttctgtatccttcttgctctttgtt
cagggagagttgctggggcaactattttctaacctctttcaaggggaaagaggccagtca
gtggtgccctggccttccacagatactcagtgtctgttgaatgaagaactgagcaccaac
tccacatcaggctctctgattgccagccctaaacaccctgctagccctcttctaaagcca
tatctcctgctcttcccccacatttgcccctggacctatctcatggctcctgctcaagac
ccggtaggcgtcttggctctgacccctgctgcctacaccttccagagagaacagagcaca
gtcccagcaactaggaacctgggctcaacttcagcaccagccctgccacttgtgtcaccc
ttctgggtctgtttcaaaattgaaggtttgtgccactgtgatgacggtgctacggttaag
ctccttgttcctcatacatacctcctgttgaacatatgtgagggtttctttcgggtatat
gccttggtctccaaatgggtctcccagacttcaggctgttctcaacacagcaaacaggat
gatcttttcaaagtaaaatcagagcctgccacctctccgcccatcaccttccaaagaacc
cctactccactcaccaccacctctcttcccatcaaactcagtgaagaagaagccaagtcc
tacctggacccaggaggacacacacggagtcagaggtgcctccaggagcagcaggagcat
ggccgaggatctgggactgagctttggggaaacagccagtgtggaaatgctgccagagca
cggcagctgcaggcccaaggccaggagcagcagcgcacgctgggctctcacctgctgcct
ggactcaccacatacctgcttgtcagccagctccgggcccagggagaggcctgtgtgcag
ttccag

>gi568815589r:114803934_115030303|GENSCAN_predicted_peptide_2|98_aa
MSDGFLRSSPEGDAGAMLLVQPAEPIISIFHLWLFLQQLGLSGGHLELPDSAAAVVVVAP
WTVKGSASGRRRKRAAVHVPIVPFFVFMCTQCLAPTYE

>gi568815589r:114803934_115030303|GENSCAN_predicted_CDS_2|297_bp
atgagtgacggcttcctgaggtcctcaccagaaggagatgctggtgccatgcttcttgta
cagcctgcagaaccaattatcagcatcttccatctctggctgttcctgcagcaactgggt
ctcagtggcggccatcttgaacttcctgactccgctgccgctgtggtggtggtggctccc
tggaccgtgaaaggcagtgctagtggaagaagaaggaaaagagctgccgtacatgtgcct
attgttcccttctttgtgttcatgtgtactcaatgtttagctcccacttatgaatga

>gi568815589r:114803934_115030303|GENSCAN_predicted_peptide_3|154_aa
MGRNQHKKAENSKNQNASSPPKDHNSSPARKQNWTENEFDKSTEVGFRRWIINSSKLKEC
VLTQCKEAKNLEKRLDELLTRITSLEKNLNDLMELQNTAPELREAYTSINSQIDQEEERI
SEIEDQLNEIKREDKIREKRMKGVNKASKKYGTM

>gi568815589r:114803934_115030303|GENSCAN_predicted_CDS_3|465_bp
atggggagaaaccagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcct
ccaaaggatcacaactcctcgccagcaaggaaacaaaactggacagagaatgagtttgac
aaatcgacagaagtaggcttcagaaggtggataataaactcctccaagctaaaggagtgt
gttctaacccaatgcaaggaagctaagaaccttgaaaaaaggttagacgaattgctaact
agaataaccagtttagagaagaacctaaatgacctgatggagctgcaaaacacagcacca
gaacttcgtgaagcatacacaagtatcaatagccaaatcgatcaagaggaagaaaggata
tcagagattgaagatcaacttaatgaaataaagcgagaagacaagattagagaaaaaaga
atgaaaggagtgaacaaagcctccaagaaatatgggactatgtga

>gi568815589r:114803934_115030303|GENSCAN_predicted_peptide_4|44_aa
MISFDFMSHIKVTLMQEDQHHIEAAKAWGLHPLKPWSELYCGSF

>gi568815589r:114803934_115030303|GENSCAN_predicted_CDS_4|135_bp
atgatctcctttgacttcatgtctcacatcaaggttacgctgatgcaagaggatcaacac
cacatagaagcagccaaggcttggggcttacaccctctgaagccatggtctgagctgtac
tgtggctccttttga

>gi568815589r:114803934_115030303|GENSCAN_predicted_peptide_5|262_aa
MHEDETKGMTADPLALTTKRALDQKLYVDAADKEENCPCFCPECLSQKLLRRPLMYPEKG
SIQEVMGLPPSYLPISAKYTVLFLMQGRQALNLCLYEVIHKGTIKLPCPQIDSLMNMSAQ
GRFAYCSVLQHPEKLSTPRLLQGGGGVTSAIQSCFFYLLSASFSNLKLEPGTKTPETSDQ
QLPGVGKVDSSMCMQTAQPKGRIKGEVTQDPGSMPTYKAKVKHKTKPWKQGEEQPVCNFR
QGVTKTKLKQLTMDTSKEFRRT

>gi568815589r:114803934_115030303|GENSCAN_predicted_CDS_5|789_bp
atgcatgaggatgaaaccaaggggatgacagctgacccactggctctcaccaccaagaga
gctttggaccagaagctctatgtggatgcagcagataaggaggaaaactgcccctgcttc
tgcccggagtgcctctcgcagaaattgctcagaagacctcttatgtatcctgaaaagggc
tccattcaagaagtcatgggcctacctccaagctacctaccaatttcagcaaagtacaca
gtccttttcctaatgcaagggaggcaggcacttaatctctgcctctatgaagttattcac
aagggaaccataaaattgccttgtccccagattgacagcttaatgaacatgtcagcacag
ggccgatttgcatattgcagtgtgcttcagcacccagagaaactctccacaccacggctg
ctgcagggtgggggaggggtgacatcagcaattcagagctgttttttctatctcctgagt
gcctctttcagcaatttgaagttagaaccaggtactaaaacacctgaaactagtgatcag
cagcttcctggagttgggaaagtggactcaagcatgtgcatgcagacagcccaacccaag
ggaagaatcaaaggagaagtgacgcaagaccccggaagtatgccaacatataaagccaaa
gttaaacataaaaccaaaccttggaaacaaggtgaagaacagcctgtatgcaacttcaga
cagggggttaccaaaacaaagctgaagcagttgaccatggacacctcaaaagaatttcgg
agaacctga

>gi568815589r:114803934_115030303|GENSCAN_predicted_peptide_6|277_aa
MAPPGDTAMHVPAGSVASHLGTTSRSYFYLTTATLALCLVFTVATIMVLVVQRTPLEHGA
FPVELIGVRHKKKLFGMPHDTSHYPSLMNLMIVVRHFNADIFLSAFAHHANQWSRLADSI
PNSPDNVPLKGERKRAEARHLLGSPFSLAVENLPPSAENQQWLRAWDVELCAHAKEKTQD
TLRYRGNTKNQTLLGNERISESYHKLPIPGQDSPQPTDTSQAPSEFQGHCRISAACNATI
YKSRFSVFLTKKESYIIDSQGDEKTQATRLMTHEMFI

>gi568815589r:114803934_115030303|GENSCAN_predicted_CDS_6|834_bp
atggcccctcctggagacacagccatgcatgtgccggcgggctccgtggccagccacctg
gggaccacgagccgcagctatttctatttgaccacagccactctggctctgtgccttgtc
ttcacggtggccactattatggtgttggtcgttcagaggacgcctcttgaacatggtgcc
ttccctgttgagctaataggagttcggcacaagaagaagttatttggaatgccccatgac
acttcccactacccaagcttgatgaatttgatgattgtggtaagacatttcaatgcagat
atttttcttagtgcatttgcacatcatgctaatcaatggtcacgcttggcagactccatt
cccaactcacctgacaacgtccccctcaaaggagaaaggaaaagggcagaagctagacac
cttctagggagccctttttcactggctgttgaaaatcttccaccatcagcagaaaatcag
cagtggctcagagcctgggatgtagagctatgtgcacatgctaaagaaaaaacacaggat
acacttcgctacagaggaaacaccaaaaatcaaacccttttgggtaatgaaaggatttct
gagtcctatcacaagcttcccattcctggccaggatagcccccagccaactgacacctca
caggcaccttcagaattccagggacattgcagaatttcagctgcatgtaatgccactatt
tataagtcacgtttttctgtcttcctaaccaaaaaagaaagttatatcatagactcacag
ggtgatgagaagactcaggccacacggctgatgacccatgaaatgttcatctag

>gi568815589r:114803934_115030303|GENSCAN_predicted_peptide_7|138_aa
MKHRLKVNPAYMTSSKKRKDIVLYAKRVTVRQTFFSTALLSPTGLQEDPNFKQSLFIFQH
PQLPFNNQKFSTLIKEAEQEGQGSSWFSATLGRPQSPCYPLTVRAHQRTQPSPQISQVHA
PENTGLPRSHLNYRTKRT

>gi568815589r:114803934_115030303|GENSCAN_predicted_CDS_7|417_bp
atgaagcatagattgaaggtcaaccctgcatatatgaccagcagcaagaaacgcaaggac
attgtattgtatgcaaaacgggtaactgtaagacaaacatttttttccactgcccttctc
agccccacaggccttcaggaagacccgaacttcaagcaaagcctttttatttttcaacac
ccacagcttccattcaacaatcagaagttttccactttgatcaaagaggctgaacaagag
ggccaagggagcagctggttctcagcaactctgggcagaccacagagcccttgctaccca
ctcactgtccgtgcccaccagaggacacagccttctccccaaatcagccaggtacatgcc
ccagaaaacactggcttgcctcgttcccaccttaattaccggaccaaacgaacgtga

>gi568815589r:114803934_115030303|GENSCAN_predicted_peptide_8|677_aa
MSEIVDQMINGRKWVLEERKNMYEGPPGWKELCMFKEHTEEGPTYRDKGQFIVVSSHVMA
PVTQWPDFLVVLVPMATVDSKAVVLKQECASESPCYNRVLDPITSVSDAAEPVIGLFRDS
TSSWFSLEGLFEENYKPLLNEINEDTNKWKNIPCSWIGRINIMKTAILPKVIYRFNAIPI
KLPMTFFSELEKTTLKFIWKQKRARIAKSILSQKNKAGGITLPDFKLYYKPTVTKTAWYW
YQNRDIDQWNRTQPSEIIPHIYNHMIFDKPDKNKKWGKDSLFNKWFWENWLAICGKLKLD
PFLTPYTKINSRWIKDLNVRPKTMKTLEENLGNTIQDIGMGKDFMSKTPKAMATKAKIDK
WDLIKLTSFCTAKETTIRVNRQPTEREKIFAIYSSDKGLISRIFKELKQTYKKKTNNPIK
NWAKDMNRHFSKEDIYAAKRHMKKCSSSLAIREMQIKTTVRCHLTPVRMAIIKKSGNNRI
SVLQNIQYLIGTALCIINQEFTVKAQEELSDVFSSGKYLVPQGAGGASRAPASRAVAPED
FQCRPGNPTLAFDVALTVLNAQAAQIQNRGKACCFLSLTLETDQRPGLQIVSAFGDPVFI
GSPLANTLRERTGNESSVLIPVFSSVLLRCKGTAPVVLLYHHHFGFSQNVCSEKAQSLAS
VHFGLPGEFPVLLGLHG

>gi568815589r:114803934_115030303|GENSCAN_predicted_CDS_8|2034_bp
atgtcggaaattgtggaccagatgattaatgggaggaagtgggttttagaagaaagaaag
aatatgtatgaaggccccccaggatggaaagaactttgtatgttcaaggaacatacagag
gagggacctacatatagggacaaagggcagtttatagttgtttcttctcatgtaatggcc
cctgtaacgcagtggccagatttcctcgttgtccttgtgcccatggccacagttgattct
aaggcagttgttctcaaacaggagtgtgcatcagaatctccttgttacaatagagttctg
gatcccatcaccagtgtgtctgacgcagcagagcctgttattggtctattcagagattca
acttcttcctggtttagtcttgaaggactcttcgaggagaactacaaaccactgctcaat
gaaataaacgaggacacaaacaaatggaagaacattccatgctcatggataggaagaatc
aatatcatgaaaacagccatattgcccaaggtaatttatagattcaatgccatccccatc
aagctaccgatgactttcttctcagaattggaaaaaactactttaaagttcatatggaag
caaaaaagagcccgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatc
acgctacctgacttcaaactatactacaagcctacagtaaccaaaacagcatggtactgg
taccaaaacagagatatagaccaatggaacagaacacagccctcagaaataataccacac
atctacaaccatatgatctttgacaaacctgacaaaaacaagaaatggggaaaggattcc
ctatttaataaatggttctgggaaaactggctagccatatgtggaaagctgaaactggat
cccttccttacaccttatacaaaaattaattcaagatggattaaagacttaaatgttaga
cctaaaaccatgaaaaccctagaagaaaacctaggcaataccattcaggacataggcatg
ggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaa
tgggatctaattaaactaacaagcttctgcacagcaaaagaaactaccatcagagtgaac
aggcaacctacagaacgggagaaaatttttgcaatctactcatctgacaaagggctaata
tccagaatcttcaaagaactcaaacaaacttacaagaaaaaaacaaacaaccccatcaaa
aattgggcaaaggatatgaacagacacttttcaaaagaagacatttatgcagccaaaaga
cacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacagtg
agatgccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaggatt
tctgtgcttcagaatatccagtatttgataggtactgctttgtgcatcataaaccaagag
tttacagtaaaagcacaggaagagctgagtgatgtgttctcttcaggaaagtacctggtc
ccccagggagctgggggcgcctccagagcccctgcctcccgagctgtggctcctgaggac
tttcagtgtagacctggcaacccaaccttagcctttgatgtggctctgacagtgctcaat
gcacaagcagctcaaattcagaaccgtggaaaggcttgttgctttctgtcactgaccctg
gagactgatcagaggcccggtctgcaaattgtcagcgcttttggagatccggtatttatt
gggtcgccactagcaaacactctcagggaaaggactggcaatgaatcatctgtactaatc
cctgtgttttcatcagtcttgcttcggtgcaaggggacagccccggttgttcttctatat
catcatcactttggtttctctcaaaatgtttgctcagaaaaagcccagagtttggcctcg
gttcactttggacttccaggggaatttcccgtcctccttggactccatgggtga

>gi568815589r:114803934_115030303|GENSCAN_predicted_peptide_9|269_aa
VFLRRKNGRENFYQNWKAYAAGFGDRREEFWLGTYGRERDEEEELLLVADTECQILNEKD
YHLNALNHQNVNQKVSETDLNQFRGLDNLNKITAQGQYELRVDLRDHGETAFAVYDKFSV
GDAKTRYKLKVEGYSGTAEEERSSEELSDLSKVKQLVEGGCNPGCRKLHPTMFSVTKKGD
SMAYHNGRSFSTFDKDTDSAITNCALSYKGAFWYRNCHRVNLMGRYGDNNHSQGVNWFHW
KGHEHSIQFAEMKLRPSNFRNLEGRRKRA

>gi568815589r:114803934_115030303|GENSCAN_predicted_CDS_9|810_bp
gtgttcctgagacgcaaaaacggacgcgagaacttctaccaaaactggaaggcatatgct
gctggatttggggaccgcagagaagaattctggcttgggacctatgggagagaaagagat
gaggaagaagaactacttctggtggcagacacagaatgtcaaattcttaatgaaaaagac
tatcatttaaatgctctgaatcatcaaaatgtaaaccaaaaagtatctgagacagatctc
aatcaatttagagggctggacaacctgaacaaaatcacagcccaggggcagtacgagctc
cgggtggacctgcgggaccatggggagacagcctttgctgtctatgacaagttcagcgtg
ggagatgccaagactcgctacaagctgaaggtggaggggtacagtgggacagcagaggag
gaaagaagttcagaagagctcagtgatttgtccaaggtaaaacagcttgtagaaggtgga
tgcaatcctggctgcagaaaactgcatccgacaatgttctcagtgacaaagaagggtgac
tccatggcctaccacaatggcagatccttctccacctttgacaaggacacagattcagcc
atcaccaactgtgctctgtcctacaaaggggctttctggtacaggaactgtcaccgtgtc
aacctgatggggagatatggggacaataaccacagtcagggcgttaactggttccactgg
aagggccacgaacactcaatccagtttgctgagatgaagctgagaccaagcaacttcaga
aatcttgaaggcaggcgcaaacgggcataa