GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:28:32

Sequence gi568815589r:96288240_96517974 : 229735 bp : 44.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -   1328   1239   90  2  0   84   59    40 0.003   0.89
 1.02 Intr -  10223  10177   47  0  2   79   99    51 0.828   3.43
 1.01 Init -  13865  13712  154  2  1  110  110   146 0.989  17.18
 1.00 Prom -  15976  15937   40                              -5.66

 2.13 PlyA -  17603  17598    6                               1.05
 2.12 Term -  26660  26541  120  2  0  120   38    45 0.534   1.17
 2.11 Intr -  31938  31846   93  0  0  120   13    94 0.670   5.26
 2.10 Intr -  33841  33759   83  2  2  130   97   -49 0.204  -0.44
 2.09 Intr -  35930  35852   79  2  1   84  113    28 0.164   4.02
 2.08 Intr -  55170  55033  138  0  0   74   85    13 0.340   0.26
 2.07 Intr -  55757  55665   93  2  0   89   99    52 0.651   6.56
 2.06 Intr -  57162  57060  103  2  1  109   76    20 0.417   3.08
 2.05 Intr -  62932  62864   69  0  0   82   86    89 0.390   6.40
 2.04 Intr -  65754  65708   47  0  2   77   39    45 0.125  -4.29
 2.03 Intr -  76311  76225   87  0  0  107  115    17 0.326   6.47
 2.02 Intr -  80066  80033   34  1  1   91  109     7 0.201   1.33
 2.01 Init -  95395  95238  158  1  2   70   76   418 0.649  36.18
 2.00 Prom -  97637  97598   40                              -4.46

 3.05 PlyA -  97726  97721    6                               1.05
 3.04 Term - 100220  99998  223  1  1   78   33   299 0.999  19.79
 3.03 Intr - 104319 104159  161  0  2   32   55   152 0.025   5.09
 3.02 Intr - 106703 106584  120  2  0   72   64    91 0.025   5.79
 3.01 Init - 129793 129374  420  1  0   67  105   737 0.908  69.69
 3.00 Prom - 139570 139531   40                              -3.76

 4.00 Prom + 143872 143911   40                              -3.86
 4.01 Init + 162041 162389  349  1  1   92   75   649 0.977  59.35
 4.02 Intr + 170140 170302  163  2  1   84   53   128 0.899   7.93
 4.03 Intr + 177098 177259  162  2  0   90  101    27 0.751   3.29
 4.04 Intr + 177471 177539   69  0  0   92   96    26 0.656   2.10
 4.05 Intr + 196223 196394  172  2  1   59   69   175 0.417  12.65
 4.06 Intr + 199760 200035  276  1  0   61   66   122 0.652   5.01
 4.07 Intr + 200579 200748  170  1  2  106   36   128 0.418   8.14
 4.08 Intr + 203512 203662  151  1  1   52   19   107 0.130   0.36
 4.09 Intr + 204781 204892  112  0  1   70   49    34 0.039  -2.35
 4.10 Intr + 208418 208632  215  0  2   28   46   186 0.569   6.83
 4.11 Term + 216117 216320  204  2  0  114   40   119 0.830   7.07
 4.12 PlyA + 218290 218295    6                               1.05

 5.04 PlyA - 219178 219173    6                               1.05
 5.03 Term - 220610 220349  262  1  1   96   37    50 0.252  -4.30
 5.02 Intr - 221550 221434  117  2  0   72  100    21 0.244   1.28
 5.01 Intr - 225361 225280   82  2  1   70   92   120 0.599   9.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 104297 104159  139  0  1   37   55   165 0.965   7.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:96288240_96517974|GENSCAN_predicted_peptide_1|97_aa
MGDVLEQFFILTGLLVCLACLAKCVRFSRCVLLNYWKVLPKSFLRSMGQWAVITGAGDGI
GKAYSFEEADEVNWETKVLNSLAILLMDSKTQKWRLE

>gi568815589r:96288240_96517974|GENSCAN_predicted_CDS_1|291_bp
atgggggacgtcctggaacagttcttcatcctcacagggctgctggtgtgcctggcctgc
ctggcgaagtgcgtgagattctccagatgtgttttactgaactactggaaagttttgcca
aagtctttcttgcggtcaatgggacagtgggcagtgatcactggagcaggcgatggaatt
gggaaagcgtactcgttcgaggaggctgatgaagtgaattgggagacaaaggtgcttaat
tctttagccatcctgttgatggattccaagactcaaaaatggaggctagag

>gi568815589r:96288240_96517974|GENSCAN_predicted_peptide_2|367_aa
MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGFPSPIFL
GIGQMAATIMILYVSKLNKIIHFPDFDKKIPVKLLSGCSVVDDVKPVLGKQYSLNIILSV
FAIILGAFIAAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYNACF
MIIPTLIISVSTGDLQQLFVPLEYFKTYPSHHAILPLNIPGSTFEFWEGVVLSAFALKPY
LLLVSADVLHGSVQLLQFSPDDSSGWSHQECIRCLHWDINRWRLHFLFVKLCRVKYLVCS
GAFTTGAFPHMLTYRQPLVYGKEAQMDRLDLVEVLPQVGIAKKGSFSSRFLGNWIQLGED
HLNSHPI

>gi568815589r:96288240_96517974|GENSCAN_predicted_CDS_2|1104_bp
atgacggccggcggccaggccgaggccgagggcgctggcggggagcccggcgcggcgcgg
ctgccctcgcgggtggcccggctgctgtcggcgctcttctacgggacctgctccttcctc
atcgtgcttgtcaacaaggcgctgctgaccacctacggtttcccgtcaccaattttcctt
ggaattggacagatggcagccaccataatgatactatatgtgtccaagctaaacaaaatc
attcacttccctgattttgataagaaaattcctgtaaagctgctctctggatgcagtgtg
gttgatgatgtgaagcctgtgctggggaagcagtattcactcaacatcatcctcagtgtc
tttgccattattctcggggctttcatagcagctgggtctgaccttgcttttaacttagaa
ggctatatttttgtattcctgaatgatatcttcacagcagcaaatggagtttataccaaa
cagaaaatggacccaaaggagctagggaaatacggagtacttttctacaatgcctgcttc
atgattatcccaactcttattattagtgtctccactggagacctgcaacagctttttgtt
cctctggagtattttaaaacctatcccagccatcacgccattttacctctaaatattcca
ggatccacatttgaattttgggaaggtgttgttctttcagcatttgccctgaaaccgtat
ctgctgctggtttctgctgatgtactccacggttctgtgcagctattacaattcagccct
gacgacagcagtggttggagccatcaagaatgtatccgttgcctacattgggatattaat
cggtggagactacattttctctttgttaaactttgtagggttaaatatttggtttgttca
ggagcttttaccacaggtgcatttcctcacatgctcacctaccgccaacccctggtgtat
gggaaggaggcccaaatggataggctcgacttggtggaagttctgcctcaggtgggcata
gccaaaaaggggtcattctcttctcggttcctggggaattggatccaactgggagaagac
cacctgaattctcatcccatctaa

>gi568815589r:96288240_96517974|GENSCAN_predicted_peptide_3|307_aa
MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTS
PGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAPPPAASASA
AASGGEDEEEASSPDSGHLKVRGPICVTIQTVEKPLFKVDSSKHISVFTPERNLLFVQKM
VLTLCFEGCLSRFTHANRHCPKHPYARLKREEPTDTLSKHQAADNKAAAEWLARYWEMRE
QRTPTLKGKLVQKADQEQQDPLEYLQSDEEDDEKRGAQRRLQEQRERLHGALALIELANL
TGAPLRQ

>gi568815589r:96288240_96517974|GENSCAN_predicted_CDS_3|924_bp
atgatccggggcttcgaggcgcccatggcggagaacccgccgccgccgccgccgcccgtc
atcttctgccacgactccccgaagcgggtgctggtgtcggtcatcaggacgaccccgatc
aagccaacgtgcggcggtggaggggagccggagccgccgccgccgctcatccccaccagc
cccggcttcagcgacttcatggtgtacccgtggcgctggggcgagaacgcacacaacgtg
acgctcagccctggggccgcgggggccgccgcctcggccgccctgcctgcagccgcagcc
gccgagcactcggggcttcgtggccggggcgcgcccccgcccgccgcctcggcctccgcc
gccgcctcgggaggtgaggacgaggaggaagcgagcagcccagacagcggccacctcaag
gtgagaggccctatctgtgtgactatccagactgtggaaaagcctttgttcaaagtggac
agctcaaaacacatcagcgtcttcacaccggagagaaaccttttgtttgttcagaaaatg
gtgttaaccttgtgttttgaaggctgcctgagcagattcacccatgcaaaccgccactgt
ccgaagcacccctacgccaggctgaagagagaggagcccacggacacactcagcaaacat
caggctgccgacaacaaggccgcggccgagtggctggcgaggtattgggaaatgagagag
cagcgcacccccactttgaaaggcaagctggttcagaaggctgatcaggagcagcaggac
cctctggaataccttcagtctgatgaagaggacgacgagaagagaggggcccagcgccgg
ctgcaggagcagcgggagcgcctgcatggagccctcgcgctcatagagcttgccaacctg
actggggcgccactccgacagtag

>gi568815589r:96288240_96517974|GENSCAN_predicted_peptide_4|680_aa
MKGALGSPVAAAGAAMQESFGCVVANRFHQLLDDESDPFDILREAERRRQQQLQRKRRDE
AAAAAGAGPRGGRSPAGASGHRAGAGGRRESQKERKSLPAPVAQRPDSPGGGLQAPGQKR
TPRRGEQQGWNDSRGPEGMLERAERRSYREYRPYETERQADFTAEKFPDEKPGDRFDRDR
PLRGRGGPRGGMRGRGRGGPGNRVFDAFDQRGKREFERYGGNDKIAVRTEDNMGGCGVRT
WGSGKDTRVPELEVEEETQVQEMTLDEWKNLQEQTRPKPEFNIRKPESTVPSKAVVIHKS
KYRDDLLCSTLQPLSQMSVGMAVDLCVFDAVIVFQMVKDDYEDDSHVFRKPANDITSQLE
INFGNLPRPGRGARGGTRGGRGRIRRAENYGPRAEVVVSLITSPRPIKVSEQRSFFSLKP
DLRVRLYSHWCGYRSAAAFAHYRFTQCHAVPGMYCKNTDSSYPIELLSHVVEDSFGEPGA
RSEPVMGYVCLPGLALADLVVCLDTSDHFLLLISKSMPFQHMGASREGDCCPLKLYCAVL
AGAGKGDPAGSTAQATLKSPLEEVQRTRSRGARPAPSLREAPSSSSFLCPPAREHRGGFS
VLCTAQDKRHWKRFTTLHFQVSNNFQKANKTKIRVRKTTSNLEGSSPDAAAAALFKEKRL
NRSFRFQRSQQSTESKIQTS

>gi568815589r:96288240_96517974|GENSCAN_predicted_CDS_4|2043_bp
atgaagggcgctctggggagtcccgtggctgccgctggcgccgcgatgcaggagagtttc
ggctgcgtggtggccaaccgcttccatcagctgctggacgacgagtcggacccgttcgac
atcctgcgcgaggccgagcgccggcgccagcagcagctgcagcgcaagaggcgcgacgag
gcggcggcggcggccggggccggtccccgcggcggcaggagcccagccggggcctcgggc
cacagagccggcgcgggcggccggagggagtcgcagaaggagcgcaagagcctcccggcg
cccgtcgctcagcggcccgatagccccgggggcggcctgcaggcgccgggccagaagcgg
actcctagaagaggggagcagcaaggatggaatgacagccgtgggccggaggggatgctc
gaaagagctgagcggagatcctacagggaataccgaccctatgagacagagaggcaggca
gacttcacagctgagaagtttccagatgaaaaaccaggtgataggtttgatcgagacaga
ccgttgagaggacgtggaggcccgagagggggtatgcgcggcagaggcagaggtggccct
gggaacagagtttttgacgcttttgaccagagaggaaagcgagaatttgaaagatatggt
gggaatgacaaaatagcagtcagaactgaagacaacatgggtggatgtggagttcgaacc
tggggatcgggtaaagataccagagttcctgagttggaggtagaagaagaaacccaagtt
caagagatgactttagatgagtggaaaaatcttcaagaacagaccagaccaaagcctgag
tttaacatccggaaaccagaatccactgttccttccaaagccgtggtgattcacaagtca
aaatacagagatgatctcctgtgtagcacactgcagccactaagccagatgagtgtgggg
atggctgtggacttgtgcgtgtttgatgctgtaattgtgtttcagatggtaaaagatgac
tatgaggacgattcccatgttttccggaaacccgccaatgacatcacatcccagctggag
attaattttggtaacctccctcgtcctgggcgtggagccagaggaggcacccggggaggc
cggggaaggatcaggagggcagagaactatggacccagagcagaagtggtggtttctttg
atcacatctcctagaccgatcaaggtctcggagcaaaggagtttcttttcattgaagcct
gatctccgtgtgcggctgtattctcactggtgtggctatcggtcagcggctgcttttgct
cattaccggtttacgcagtgccacgcagtgcctggcatgtattgcaaaaacactgacagt
tcctatcccatagagctgttgagtcatgtggttgaagacagttttggggaacccggtgca
cgttctgaacctgtaatgggctatgtttgcttaccagggctagctctcgctgacttggtc
gtgtgcctggatacttcagaccatttccttctgttgatcagcaagtccatgccattccag
cacatgggagcttcacgggaaggagactgctgtcctctgaaactgtactgtgcggtgctg
gcaggcgcaggcaagggagaccccgctggctccaccgcccaggccaccctgaagtccccg
ctggaggaggtgcagcggacccgctcccggggagcccgtcccgcgccctccctccgagaa
gccccttcctccagctccttcctctgcccgccggcccgagagcaccgaggcggcttctct
gtcctgtgtactgcccaggacaagcggcattggaagcgattcacgacgctacactttcag
gtcagtaacaactttcagaaagcaaacaaaaccaaaataagagtcagaaaaaccacttcc
aatctggagggctcctcgcccgatgctgctgctgctgcgctcttcaaggagaagcgtttg
aatcgatcatttcgttttcagagatcccaacagagcactgagtcaaagatccagaccagc
tag

>gi568815589r:96288240_96517974|GENSCAN_predicted_peptide_5|153_aa
XFTISEISEYRGSKDAAEKKVNWNIGKRVILQSSVQSCKTSEPNISGSAGITKRTTRSAS
RKSSVKSFPAMYIRGFGPRGLISVKLVPSAKQPVSQETLAELGVLCALPFEDSFSSAMSP
LHCFVQPYCTLNTRMGMQQCPGIRIGGLSGTDS

>gi568815589r:96288240_96517974|GENSCAN_predicted_CDS_5|462_bp
natttcactatatctgaaatctcagagtaccgaggctccaaggatgctgcagagaagaag
gtgaactggaatataggcaagagagtaattcttcaatccagtgttcagagctgtaaaaca
tctgaacctaacatttctggcagtgcaggcattactaaaagaaccaccagatctgcttca
aggaaaagcagtgttaaaagcttccctgccatgtatatccgaggctttgggcctaggggc
cttatcagtgtgaaattagtccccagtgcaaagcagccagtctcccaagagaccttggca
gagctgggagttctgtgtgctttgccttttgaagactcattcagctctgccatgtctcct
ctacactgttttgtacaaccttactgcacacttaacactcgcatggggatgcagcagtgc
cccggcataaggattggaggactgtcaggcactgactcatga