GENSCAN 1.0	Date run: 13-Jun-118	Time: 19:13:20

Sequence gi568815589r:74966755_75177581 : 210827 bp : 39.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   9108   9187   80  1  2  119   50   101 0.733   6.35
 1.02 PlyA +  11458  11463    6                               1.05

 2.15 PlyA -  14066  14061    6                               1.05
 2.14 Term -  16836  16778   59  1  2   91   45    69 0.875  -0.23
 2.13 Intr -  17114  17027   88  2  1  103   68    55 0.891   3.62
 2.12 Intr -  18256  18153  104  2  2   61   94    81 0.811   4.97
 2.11 Intr -  29770  29693   78  2  0   96   97     2 0.452   0.50
 2.10 Intr -  32022  31844  179  2  2   86   92   116 0.754  10.44
 2.09 Intr -  61797  61258  540  2  0   50   90   477 0.100  35.19
 2.08 Intr -  61935  61855   81  2  0   83   97   108 0.939   9.03
 2.07 Intr -  70640  70532  109  0  1    6  116    64 0.789  -0.58
 2.06 Intr -  73334  73212  123  0  0   39   45   149 0.019   5.34
 2.05 Intr -  83006  82886  121  2  1   91   40   119 0.896   6.55
 2.04 Intr -  89244  89127  118  2  1   65   78    63 0.016   2.55
 2.03 Intr -  89430  89379   52  1  1   71    5    79 0.000  -5.05
 2.02 Intr - 100086 100003   84  1  0   93   84   102 0.671   9.17
 2.01 Init - 102290 102242   49  2  1   33  111    34 0.362   1.37
 2.00 Prom - 110306 110267   40                              -6.25

 3.00 Prom + 112867 112906   40                              -5.25
 3.01 Init + 116497 116618  122  0  2   67   60    84 0.619   3.44
 3.02 Term + 117477 117639  163  0  1   89   38   109 0.699   2.43
 3.03 PlyA + 118040 118045    6                               1.05

 4.00 Prom + 118921 118960   40                              -6.65
 4.01 Init + 121077 121241  165  2  0  104  101    74 0.964   9.98
 4.02 Intr + 121285 121401  117  0  0   41   91    87 0.907   4.04
 4.03 Intr + 121801 121986  186  0  0  102  102    40 0.515   5.76
 4.04 Term + 131429 131587  159  1  0  109   45    60 0.341   0.76
 4.05 PlyA + 133164 133169    6                               1.05

 5.00 Prom + 145840 145879   40                              -4.25
 5.01 Init + 151595 151724  130  1  1   93  105    38 0.368   6.36
 5.02 Intr + 152209 152471  263  2  2   63   42   129 0.233   2.08
 5.03 Intr + 160815 160865   51  2  0   79  115    49 0.718   4.89
 5.04 Intr + 163824 163887   64  2  1   94  115    -2 0.516   0.47
 5.05 Intr + 165016 165069   54  2  0   63   92    57 0.425   1.63
 5.06 Intr + 167592 167641   50  1  2   63  110    14 0.473  -1.42
 5.07 Intr + 170784 170862   79  2  1   63   98   117 0.932   8.41
 5.08 Intr + 174080 174178   99  0  0   49   68   104 0.874   3.66
 5.09 Term + 183254 183519  266  0  2   83   42   218 0.024  11.39
 5.10 PlyA + 183814 183819    6                               1.05

 6.00 Prom + 184529 184568   40                              -5.85
 6.01 Init + 195490 195619  130  0  1   40   46   149 0.507   6.26
 6.02 Intr + 200840 200877   38  0  2   84   62    36 0.102  -2.34
 6.03 Intr + 208640 208811  172  1  1   68   50   125 0.140   5.29
 6.04 Term + 208866 209002  137  1  2   37   46   139 0.247   1.80
 6.05 PlyA + 209022 209027    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 179929 179987   59  2  2  130   31   109 0.967   6.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:74966755_75177581|GENSCAN_predicted_peptide_1|26_aa
XRKKKCYDNRAASPMVLAKRRYGCDC

>gi568815589r:74966755_75177581|GENSCAN_predicted_CDS_1|81_bp
ngcagaaagaagaaatgttatgacaacagagcagcaagtcccatggtcctagctaaaagg
cggtacggctgtgactgctga

>gi568815589r:74966755_75177581|GENSCAN_predicted_peptide_2|594_aa
MYLKYRQEMQDITWEVVYLDGTKSEEDLFLQVYEDLIQELAKQKLNPQPSSVRFMAIVNM
SREQIKEPGKARALSGQNEAFCSTLLEPSQGCKPFHQVIHGRCCKAQKRRSLVLAYDHPD
NTGFRTCCSAGLQLLEIADSFGMVRPADDEMTANEETACDSQFPRGKGHNKPHRATRGST
SVGTTYALNEFTFYWETRYFSSVRNLVTEEGVTLSGMISAWDRVQPPAQQSGTRRLLSPT
HAAAHRGLGPALGSVVVTSARCLRSPAANERRPHGPSAYQGTRMRIGSGSPEDLAEPSAD
GGLRVAGAERAASWGHVRGGRRLEEGQAAATTLSVAERRKRARPRAAAAMQRRRRPPPPT
SRLPEGCGGGGGGSEEVEVQFSAGRWGSAAAVSAAAAAATRSTEEEEERLEREHFWKIIN
AFRYYGCSEINKYKLYPWIHQFSNNRRSADQIRPIFFPDVDPHSLPPGSNFSMTAGDFQE
IYSECNTAHNVIDYIDTIWKILKPGGIWINLGPLLYHFENLANELSIELSYEDIKNVVLQ
YGFKVEVEKESVLSTYTVNDLSMMKYYYECVLFVVQIYYAMQICTTQVKMEEMS

>gi568815589r:74966755_75177581|GENSCAN_predicted_CDS_2|1785_bp
atgtatctaaagtacagacaagaaatgcaggacatcacatgggaagttgtgtacctggat
ggaacaaaatctgaagaggacctctttttgcaagtatatgaagatctaatacaagaacta
gcaaagcaaaagttaaacccacaaccttccagtgtgcgctttatggccatcgtgaacatg
tcacgggagcaaatcaaggagcctggaaaggcaagagctctgtcagggcaaaatgaagct
ttctgttccacacttttggagcctagtcaaggatgcaagccatttcatcaggttatccat
gggaggtgttgcaaggctcagaaaagaaggtcccttgttctcgcctatgatcaccctgat
aatactggatttaggacgtgttgttcagctggtctacagctgctagaaatagcagattca
tttggtatggtgaggccagcagatgatgagatgactgccaatgaagagacagcttgtgac
tcacagttcccaagagggaaggggcacaacaagccacacagggccacacggggaagcacc
agtgtcgggacaacctatgccttaaatgagttcacattctactgggaaaccagatatttt
agcagtgtgagaaacttagtaactgaggaaggagtgactctttcggggatgataagtgcc
tgggaccgcgttcagcctccagctcaacaatccggcactcgccggcttttaagtcccacc
cacgcggccgcgcacaggggccttggccccgcccttggaagcgtggttgtgacgtcagcg
cgctgtctccgaagcccggcagcaaatgagcgcagaccgcacgggccctccgcgtaccaa
ggcacacgcatgcgcattggttctgggagccctgaagacctggcggagcccagcgcggat
ggaggcctgagggtggcgggggcggagcgcgccgcgagctgggggcatgtccgcggcggg
cgccgtctagaggaaggccaagcagccgccaccacgctgtcggtcgcggagagacgcaag
cgagccaggccgagggccgcggcggcgatgcagcgacggcgtcgccctccgccgcccacc
tcccggctgcccgagggctgcgggggaggaggcggtggcagcgaggaggtggaagtgcag
ttttccgccgggcgttggggctcggccgcggcggtttcggcggcagcggcggcggccacg
cgcagcaccgaggaggaggaggagaggcttgagcgtgagcacttctggaagatcattaat
gccttccgctactacggatgttctgaaattaataaatataaactttatccttggatccat
cagtttagcaataaccggagatcagctgatcagattcgacccatctttttccctgatgtt
gacccccacagtcttcctcctggttctaacttttctatgacagcaggagattttcaagag
atttattcagaatgcaacacagctcacaatgtaattgattatattgatacaatatggaaa
atactcaagccaggtggaatttggataaatctaggtcctctgctgtaccactttgaaaat
ctggcaaatgaactttccatagaattgagctatgaggatataaaaaacgttgttctgcag
tatggattcaaggtagaggtggaaaaagaatctgtattgtcaacatatactgtgaatgat
ctctctatgatgaaatactactatgaatgtgtcttgtttgtggtccaaatatactatgcc
atgcagatttgtactacacaagtaaaaatggaggaaatgtcttga

>gi568815589r:74966755_75177581|GENSCAN_predicted_peptide_3|94_aa
MTVTFQPSPALSTFPPHWLPLLPLSANHWGVLRTVKQFNVRGVARDLGRVARGKRLPAKL
EAPSNAPVSMICVHTLPGEGLCRKKPGGKRAIVV

>gi568815589r:74966755_75177581|GENSCAN_predicted_CDS_3|285_bp
atgacagtgacctttcagcccagccccgcattatccacattcccgccgcactggcttccc
ctgctaccactgagtgccaaccactggggtgtgctcaggactgtcaaacagttcaacgtc
aggggggttgccagggacctaggccgtgtagccaggggcaagcggctgcctgccaagctg
gaggctcccagcaatgctccagtttctatgatctgtgtccacactctccctggggagggg
ttatgcagaaaaaagcctggtgggaagagggctattgttgtctga

>gi568815589r:74966755_75177581|GENSCAN_predicted_peptide_4|208_aa
MSTRPPRQATYQLCEGGKSPGKAFRAQPSPGLQHRNPLETPPGPSKAARRGRGEQRQRRQ
PSARLYPVRRYPQLAPREAHSPFPHAPPGLEGCQPRVGAGPRRRTVVSQTKRTGVPGVPG
GGQAVGFSAGSLGFAAPGSEMSKPPPKPVKPGEGGKTPGPFSMIHFPTPSYSVLSSMWIE
TYGGIKHTKQRLFISPDFHEKQQRDGKG

>gi568815589r:74966755_75177581|GENSCAN_predicted_CDS_4|627_bp
atgagtacacgtcctcctcggcaggccacctatcagctctgtgagggtggcaagagtcca
ggcaaggctttcagggcgcaaccaagtcccgggctccagcacagaaaccctctggaaaca
cctccaggccccagcaaggcggcgcggcgcggcaggggcgagcagcggcagaggcgacag
ccaagcgcgcgcctgtacccagtgcgccgctacccgcagctcgctccccgagaggcccac
agcccctttccccacgctcctcctgggttagagggatgccagccaagggtgggcgccggt
cctaggaggcgcacggttgtaagccagacaaaaagaactggggtgcccggagtgccaggt
ggcgggcaagcggtgggcttttcggcggggtctttaggatttgcagctccaggaagcgag
atgtcgaagccgccacccaaaccagtcaaaccaggtgagggaggtaagactcctgggcca
ttttcaatgatccacttcccaactcccagctactcagtgctcagcagcatgtggatagaa
acatatggaggaattaaacacaccaagcaaaggcttttcataagtccagatttccatgag
aaacaacaaagagatgggaaaggatag

>gi568815589r:74966755_75177581|GENSCAN_predicted_peptide_5|351_aa
MAWKVANMGEGSGRLLPRVGVDWKGRAFRACGSHLDFALGKIGGTRAFSLWAVSLLPASP
GFAPDPAVPKVRGNSEGHTEQVTLSISSLPSGQGLPSNPKSVFYLLREFSYLTAIDSSCE
SGDTILQWNHAPDELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNP
LHEAAKRDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIE
KKLAFDMATNAACASLLKKKQGTVPVRDIFTDMMSFDLCSNLRRGMLMPQLFTETLRFEE
VKELVEGGHTGLGNPRAIACCNSQMSSFTFSQKNLQKQDSFFPTEALDIGI

>gi568815589r:74966755_75177581|GENSCAN_predicted_CDS_5|1056_bp
atggcttggaaagttgcaaacatgggagagggtagtgggagactacttccgagagttggg
gtggactggaagggcagagcatttagggcctgtggatctcatttggattttgctctgggt
aagattggagggaccagagctttctctctgtgggcagtcagcttgctgcccgcttcacct
gggtttgccccagaccctgctgtccccaaagttagaggcaactcagaaggtcacacagaa
caagtgacactgagcatcagttcactgccatcaggccagggcctgccttcaaatcccaaa
tctgtcttttacttactgcgtgaattttcttacctcactgccattgattcctcatgtgaa
agtggggataccattctgcagtggaaccatgctccagatgaattatactttgaggaaggt
gatattatctacattactgacatgagcgataccaattggtggaaaggcacctccaaaggc
aggactggactaattccaagcaactatgtggctgagcaggcagaatccattgacaatcca
ttgcatgaagcagcaaaaagagatatagtggaaatgctatttactcaaccaaatattgaa
ctgaaccagcagaacaagttgggagatacagctttgcatgctgctgcctggaagggttat
gcagatatcgtccagttgcttctggcaaaaggtgctagaacagacttaagaaacattgag
aagaagctggccttcgacatggctaccaatgctgcctgtgcatctctcctgaaaaagaaa
cagggaacagtgcctgtgcgagacattttcacagacatgatgtcatttgatctttgcagt
aaccttaggcgaggaatgttaatgccccaactttttacagagacgctgaggtttgaagaa
gtgaaggaactggttgaaggtggacacacgggtctggggaacccacgcgctattgcctgc
tgcaacagtcagatgtcatcattcacattctctcagaaaaatctgcagaaacaggacagc
ttctttccaacggaagcccttgatataggcatctaa

>gi568815589r:74966755_75177581|GENSCAN_predicted_peptide_6|158_aa
MFPPFDSIIVNNAAMNVAVQVPGQVPVLNSVRYIPTSGIPGPYVSHPHTESTDQLKVEFN
SPTWLLRHASLVECSGSDTLGLKALLKEDFQLLLRSLGTQLPDFRGTLAALWEADSQHQL
AGHGSQRSWKWIPSLKEINLVGALWSGNECSAKPLPDP

>gi568815589r:74966755_75177581|GENSCAN_predicted_CDS_6|477_bp
atgtttccaccttttgacagcattattgtgaataatgctgcaatgaatgttgctgtacaa
gtacctggtcaagtccctgttttaaattctgttcggtatatacctacgagtggaattcct
gggccatatgttagccatcctcacactgagtctacagatcaactcaaggtagagtttaat
tctcctacctggcttttgcgacacgcatcactagtagaatgcagtggaagtgacactctg
ggactgaaggctttgttaaaagaagacttccagcttctactgaggtctcttggaactcag
ttgccagactttcggggaactttagcagccctgtgggaagctgacagccagcatcaattg
gccggtcatgggagtcagcgttcttggaagtggatccccagcctcaaagaaatcaactta
gttggtgctttgtggagcggaaatgaatgctcagccaaacccttaccagatccctga