GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:18:05

Sequence gi568815589f:877002_1091002 : 214001 bp : 43.20% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  16911  17194  284  1  2   77   80   227 0.694  17.94
 1.02 Intr +  17605  17697   93  0  0   47  116    21 0.611   0.96
 1.03 Intr +  39759  39906  148  2  1   69   78   103 0.023   7.21
 1.04 Term +  69800  69960  161  0  2   62   35   152 0.566   5.40
 1.05 PlyA +  72207  72212    6                               1.05

 2.00 Prom +  78399  78438   40                              -6.06
 2.01 Init +  85258  85358  101  0  2   52  100    62 0.817   3.55
 2.02 Intr +  87652  87783  132  1  0   72   71    50 0.392   1.46
 2.03 Intr +  91000  91134  135  1  0   62   46   143 0.394   7.18
 2.04 Intr +  92443  92726  284  1  2   47   13   110 0.095  -3.54
 2.05 Intr +  93821  94055  235  0  1   96   59   107 0.350   5.35
 2.06 Intr +  95182  95369  188  1  2  125   81    15 0.872   3.83
 2.07 Term +  95607  95860  254  1  2   67   48   144 0.409   4.10
 2.08 PlyA +  97236  97241    6                               1.05

 3.00 Prom +  99228  99267   40                              -4.56
 3.01 Init + 100001 100454  454  1  1   69  110   886 0.961  84.93
 3.02 Intr + 100594 100715  122  2  2   89   51    97 0.297   6.31
 3.03 Intr + 105925 106051  127  0  1   36   64   113 0.303   3.95
 3.04 Term + 113040 114004  965  1  2   82   39   925 0.934  79.22
 3.05 PlyA + 114142 114147    6                               1.05

 4.04 PlyA - 114229 114224    6                               1.05
 4.03 Term - 118276 118251   26  2  2  119   47   -19 0.074  -4.51
 4.02 Intr - 121797 121542  256  0  1   46   86   158 0.359   8.42
 4.01 Init - 132278 132234   45  2  0   56   81    73 0.168   2.17
 4.00 Prom - 143022 142983   40                              -3.46

 5.00 Prom + 149496 149535   40                              -3.26
 5.01 Init + 165647 165731   85  1  1   53   35   128 0.913   2.98
 5.02 Intr + 166046 166323  278  0  2   81   81    70 0.919   2.84
 5.03 Term + 168632 168970  339  1  0   77   47   191 0.568   8.44
 5.04 PlyA + 171385 171390    6                               1.05

 6.00 Prom + 172538 172577   40                              -1.36
 6.01 Init + 174613 175137  525  0  0  106   92   875 0.812  84.55
 6.02 Intr + 176721 176823  103  2  1  114   98    76 0.994  10.95
 6.03 Term + 179215 180272 1058  2  2   84   48   515 0.661  39.40
 6.04 PlyA + 180519 180524    6                               1.05

 7.05 PlyA - 181549 181544    6                               1.05
 7.04 Term - 191985 191456  530  1  2   35   36   192 0.324   3.12
 7.03 Intr - 193407 193368   40  0  1   23   83    88 0.019  -0.40
 7.02 Intr - 204880 204708  173  2  2  122  106   -39 0.210   0.96
 7.01 Intr - 205551 205342  210  1  0   48   87    89 0.177   3.68

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:877002_1091002|GENSCAN_predicted_peptide_1|228_aa
XGRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADS
ASGEVGNPLGGSPVKNSLRGLPGPYVPGQTGNQWQKMLGKAFWVAVICVMNLHLGKETGH
NLYGRKQMKNMENRHAMSSQYRMHSYYPPPSYLGQSVPQFFTFEDAPSYPEARASGKIGE
YVLSVLMGVYVQVCKFTLAVVEIHTKEQCLTMQGLDSQTVPIKIPKSR

>gi568815589f:877002_1091002|GENSCAN_predicted_CDS_1|687_bp
nagggacgtatggtcatccaggatattcctgctgtcaccagcagagggcatgtggagaac
acacctgacctggtttcagactccacctactacagcagcttctaccagccgtctctgttt
ccttattacaacaatctatacaactgcccgcagtactccatggccttggctgctgattct
gcttctggggaggtgggaaatcccctcgggggatcccctgtgaagaacagccttcggggc
ctccccggaccttatgtgcctggtcagacaggaaaccagtggcagaaaatgctgggtaaa
gccttctgggtggcagtaatctgcgtgatgaatttgcaccttgggaaggaaacaggtcat
aatctgtatggaagaaagcagatgaagaacatggagaaccgccatgcaatgagctcccag
tacaggatgcattcttactacccgcctccctcttacctgggccagagcgtgccccagttc
ttcacttttgaggatgctccctcttacccggaagccagggcgagcggaaagattggggaa
tacgtcctttctgtgctaatgggtgtgtacgtccaggtctgcaagtttacactggcagta
gttgagattcacacaaaagagcagtgcctgacaatgcaaggactggattcacagacggtg
cccatcaagataccaaagagccgataa

>gi568815589f:877002_1091002|GENSCAN_predicted_peptide_2|442_aa
MSVGGKFPQLTEFGGKGAVWSITIADRQEGFFGSAAGPNSLPQAQEQYTNIFTDGVLSIS
GSIILPFFGVIPQSGITSSQDSGLVSLSSSSPISNKSTKAVLECEPASEPSSFTVTPVIE
EDERLSFIAQCFTSLVKEDHFITLVRLLLLQPCALRRAAVAVAVVTATAEAAAARGMEPD
RGVVTSKVFLVASWKMIPRPPCRRVRGPLPTAPPLSLADLTRGLTTHRDKQAAGFAPPPR
GPWLKFHLESCRPCATELGPRTPLVTLAFLLPQPPSYPQPGLPPLTTLGDPNRGQRAPRP
GLQAKFAPPVPGVSAARAVSLHYSRAPESERFPRSAQIRLLSPRLGFVQGQQRRRREAGG
QGLRRSLPGRCGEAADVPSRTHALLLLGVGSAAGAPDRELESDERLPPGPPGTAAQRGAP
QASAFPVPFESAGLRSRRWALG

>gi568815589f:877002_1091002|GENSCAN_predicted_CDS_2|1329_bp
atgtcagtgggaggaaagttcccacaactgactgagtttgggggcaagggagcagtctgg
agcatcaccattgctgacaggcaagaagggttttttggaagtgcagctggccccaactcc
cttccccaagcacaagagcagtacactaacatcttcactgacggtgtgttgagcatctca
ggctcaattattcttcctttcttcggggttattccccagagtggaattaccagcagtcaa
gattctggcttggtttccctctcgagcagctctcctattagtaacaagagcacaaaggca
gtgcttgaatgtgagcctgcgtcggagcccagcagcttcacagtcactcccgtcatcgag
gaggacgaaagattgagttttattgcccagtgctttacgagtttagttaaggaagatcat
tttatcacacttgtcaggctgctgctactgcagccgtgtgcccttcggcgggcggctgta
gctgtagctgttgtgacggctacggcggaggctgcggccgcgcggggaatggagccggac
cgcggagtcgtcacctccaaggtgtttctagtggcctcctggaagatgatcccgcgccca
ccttgccggcgtgttcgcgggcccctgcccactgccccccctctttctttagcggacttg
acccgcgggctgacaacccaccgcgacaagcaggcggctgggttcgcgccgccgccccgg
ggcccttggctcaaatttcacctcgagtcctgcagaccctgcgccactgaattggggccc
aggacgcccttggtgacactcgccttcttgctgccacaaccaccgtcatacccgcagccg
gggctccctccgctaaccacgcttggagaccccaatcggggacagagggcgcctcggcct
ggcctccaggcaaagttcgcgccccctgttcctggggtgtcggccgcgcgggccgtttcc
cttcattactcccgggcccctgaatccgaacgctttcccagaagcgcgcaaatccgcttg
ctttccccgcggctgggctttgttcagggacagcaaaggaggaggcgggaggctggtgga
cagggtctgcgacgctcccttccaggacggtgtggggaagcggccgacgtccccagccgg
actcacgccctcctactactgggcgtcggctccgccgcgggcgctcccgacagggagctg
gagtcggacgagcggctgcccccagggcctccaggaaccgcggcccagcggggagcgccc
caggctagcgcttttccagttcccttcgaaagcgcggggctgaggtcgcggcgctgggcc
ctcggatga

>gi568815589f:877002_1091002|GENSCAN_predicted_peptide_3|555_aa
MNGYGSPYLYMGGPVSQPPRAPLQRTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCIL
IIERQRVMAAQVALRRQQANESLESLIPDSLRALPGPPPPGDAVAAPQPPPASQPSQPQP
PRPAAELAAAAALRWTAEPQPGALQAQLAKPGRGFLSREKPAESGPSASGTRARREGASG
QPNDGTVRQYRQSCVALMACARVLMAEVEDAVIGQLVLTGPPPCDCVSYVPHRLNLTEER
LGDGKSADNTEVFSDKDTDQRSSPDVAKSKGCFTPESPEIVSVEEGGYAVQKNGGNPESR
PDSPKCHAEQNHLLIEGPSGTVSLPFSLKANRPPLEVLKKIFPNQKPTVLELILKGCGGD
LVSAVEVLLSSRSSVTGAERTSAEPESLALPSNGHIFEHTLSSYPISSSKWSVGSAFRVP
DTLRFSADSSNVVPSPLAGPLQPPFPQPPRYPLMLRNTLARSQSSPFLPNDVTLWNTMTL
QQQYQLRSQYVSPFPSNSTSVFRSSPVLPARATEDPRISIPDDGCPFVSKQSIYTEDDYD
ERSDSSDSRTLNTSS

>gi568815589f:877002_1091002|GENSCAN_predicted_CDS_3|1668_bp
atgaacggctacggctccccctacctgtacatgggcggcccggtgtcgcagccgccacgg
gcgcccctgcagcgcacgcccaagtgcgcgcgctgccgcaaccatggcgtcctgtcctgg
ctcaagggccacaagcgttactgccgcttcaaggactgcacctgcgagaagtgcatcctc
atcatcgagcggcagcgggtcatggctgcgcaggtggcgctgcgccggcagcaggccaac
gagagcttggagagcctcatccccgactcgctgcgcgctctgccagggcccccgccgccg
ggggacgccgtcgccgccccgcagccgccgccagcctctcagccgtcgcagccgcagccg
ccgcgccctgctgccgagttggccgcggccgccgcgctgcgttggactgccgagccgcag
cccggggctctgcaggcgcagctcgccaagccaggccggggcttcctctcccgggagaag
ccggctgagtctggacccagcgcgagtggcactcgcgcccgcagggaaggcgcctccggg
cagccaaacgacgggactgtgcgtcagtatcgccagtcctgtgtggctctgatggcttgt
gcacgggtgctcatggcagaggtggaggatgcagtgataggacagctggtcctcacaggt
ccaccgccttgtgattgtgtcagttacgtcccacatcgccttaatttgactgaagaacga
cttggagacggcaagtcggcagacaatacagaggtcttcagtgacaaagacactgaccag
aggagttccccagatgtggcaaagagtaagggctgcttcacccctgagagccctgagata
gtgtccgtggaggaagggggatacgctgtccagaaaaacggaggcaaccccgagagccgc
cctgacagccccaagtgtcacgcggagcagaatcacctcctgattgagggcccctcgggg
actgtttctctgcccttcagcttgaaagccaacagaccgccgcttgaagtgttaaaaaag
atattccccaaccagaagccaacggtgcttgagctcatcctcaagggctgtggcggggac
ctggtgagcgccgtggaagtccttctgtccagccgatcctcagtcacgggagcagagcga
acttccgcagaacctgagagtctagcgttgccctccaatgggcacatctttgaacacacc
ttgagctcctaccccatctcgtcttccaaatggtctgtgggatcagcctttcgagtccca
gacacgttgaggttttctgccgactctagcaacgttgtccccagtcccttggctgggcct
ctgcagccccctttcccccagccaccccggtacccgctgatgctgaggaatactttggcg
agaagccagtcgagcccctttttgcccaatgatgtcaccctgtggaacaccatgacgctg
cagcagcagtatcagctgaggtcccagtatgtcagtcctttccccagtaactctaccagc
gtcttcagaagctcgcccgtccttcctgcccgcgccacggaagaccctcggatttccatc
cctgatgatgggtgtccatttgtgtcaaagcagtccatttacaccgaggacgactatgac
gagaggtctgactcctcagactctagaacactcaacacatcatcttaa

>gi568815589f:877002_1091002|GENSCAN_predicted_peptide_4|108_aa
MAPLARGAQSVRPVLPPGGSRAGKNIHAGGSGKRKEGKRRLHAFTSTSLQGAAEPGRTFT
QAAPGNGRRENADFTHLPPLASRGQQSREEHSRRRLRETEGQARDLGS

>gi568815589f:877002_1091002|GENSCAN_predicted_CDS_4|327_bp
atggcgccattggctcgaggagcacagagtgtccgcccggtgctgcctccagggggcagc
agagccgggaagaacattcacgcaggcggctccgggaaacggaaggagggaaaacgccga
cttcacgcatttacctccactagcctccagggggcagcagagccgggaagaacattcacg
caggcggctccgggaaacggaaggagggaaaacgccgacttcacgcatttacctccacta
gcctccagggggcagcagagccgggaagaacattcacgcaggcggctccgggaaacggaa
gggcaagctagggaccttgggagttga

>gi568815589f:877002_1091002|GENSCAN_predicted_peptide_5|233_aa
MLSADRRVLPTAPPRGLLPLRPARRPAAEHRLLSGVSIIKEKISSRPLKFTWRLVTRSAL
EAGFGISLSPLSPAPPPHPRGETPEQAFCIFSPHLELQKIYGKVIWFHFNLFILQKPKVV
MPVEVVRRCNAERLSAEGGAFEAGSGGATAKPATAKHFSRDAQTFSNAGRHPGRWRQVDL
ATGDLGCRWKARIPAGPQPPLQASEAGELGGIGRKSGFGCPPASGALQASSRS

>gi568815589f:877002_1091002|GENSCAN_predicted_CDS_5|702_bp
atgctgagcgcggaccggcgtgtcctccccacagcgcccccgcgcggcctcctcccgctg
cgccccgcacggcgacccgccgcggaacaccgcctgctctccggggtcagcattatcaaa
gagaagatttcctccaggcccttaaaatttacgtggcgccttgttacaaggagcgcgctg
gaagctggctttggtatctccttgtcccctctttctcctgccccgcccccacatccccgt
ggagaaacccccgagcaggccttttgcattttctcaccccacttagaactacaaaaaata
tatgggaaggtgatttggtttcacttcaacctcttcattttgcagaagcctaaagtggtg
atgccggtggaagtcgtgagacggtgcaacgctgagcggctttccgcagaaggaggtgcc
ttcgaggccggctctggaggagccacagccaagccggccacagcaaagcacttctctcgg
gatgctcagacgttttcaaatgccggtcgccaccctgggcgctggcggcaggttgactta
gccacaggcgacttaggctgcaggtggaaggcgaggattcccgccggcccccagcctcct
ctgcaggcctccgaagctggagagttgggtggaatagggaggaaatcgggcttcggatgc
cccccagcctcgggcgctctgcaggctagctcacggagttga

>gi568815589f:877002_1091002|GENSCAN_predicted_peptide_6|561_aa
MADPQAGSAAGDWEIDVESLELEEDVCGAPRSTPPGPSPPPADGDCEDDEDDDGVDEDAE
EEGDGEEAGASPGMPGQPEQRGGPQPRPPLAPQASPAGTGPRERCTPAGGGAEPRKLSRT
PKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRVMAAQVALRRQQATEDKKGL
SGKQNNFERKAVYQRQVRAPSLLAKSILEGYRPIPAETYVGGTFPLPPPVSDRMRKRRAF
ADKELENIMLEREYKEREMLETSQAAALFLPNRMVPGPDYNSYKSAYSPSPVEPPSKDFC
NFLPTCLDLTMQYSGSGNMELISSNVSVATTYRQYPLSSRFLVWPKCGPISDTLLYQQCL
LNATTSVQALKPGASWDLKGARVQDGLSAEQDMMPSKLEGSLVLPHTPEIQTTRSDLQGH
QAVPERSAFSPPRRNFSPIVDTDSLAAQGHVLTKISKENTRHPLPLRHNPFHSLFQQTLT
DKSGPELKTPFVKEAFEETPKKHRECLVKDNQKYTFTIDRCAKDLFVAKQVGTKLSVNEP
LSFSVESILKRPSSAITRVSQ

>gi568815589f:877002_1091002|GENSCAN_predicted_CDS_6|1686_bp
atggccgacccgcaggctggctccgcggccggggactgggagatcgatgtcgagagcctg
gagctggaagaggacgtctgcggggcgccgcggtccacgccccccgggcccagcccgccg
ccggcggacggggactgcgaggacgacgaagatgacgacggggtggacgaagacgcggaa
gaagagggcgacggcgaggaggcaggcgcgtcccccgggatgcccggccagccggagcag
cgggggggaccgcagccgaggccgccgctcgcgcctcaggcctcacccgccggcaccggt
ccccgagagcgctgcactcccgcgggcggcggcgcggagccgcgcaagctgagccgcacg
cccaagtgcgcgcgctgccgcaaccacggcgtggtgtcctgcctgaagggccacaagcgc
ttctgtcgctggcgcgactgccagtgcgccaactgcctgctggtggtggagcggcagcgc
gtcatggccgcccaggtggcgctccggaggcagcaggccaccgaggacaagaaggggctt
tccgggaaacagaataatttcgagcgcaaagctgtgtaccagaggcaagtcagagccccc
agtttgctggccaaaagcattttagaaggctatcgccccattccagcggagacttatgta
ggagggaccttccctctacctcccccagttagtgacaggatgaggaaaagaagagccttt
gctgataaagagttggagaacattatgctggagagagaatataaagaaagggagatgttg
gaaacttctcaagctgctgctctgtttctgcccaaccgcatggtgcctggacctgactac
aattcctacaaaagtgcctacagccccagcccagtggaaccaccaagcaaggacttctgt
aattttttgcccacctgccttgatttaaccatgcagtattcagggtctgggaatatggaa
ctaatttcttctaatgtcagcgtggccacaacttatagacagtatcccttgtcctcaaga
tttttagtttggcccaagtgtggccccattagcgacaccctcctctaccagcaatgcctg
ctaaatgccaccacctcagttcaagccctgaagcctggggccagctgggacttgaaggga
gcacgagtccaggatggactcagtgcagagcaggacatgatgccatcgaaattggaaggt
tccctggtgctgcctcacactcctgagatccagaccacgagaagtgaccttcagggtcat
caggctgtcccagagaggtccgcgttctccccaccccgacggaatttctctcccattgtt
gacacggactccctggcagctcaagggcatgtcttaacgaagatcagcaaagaaaacacc
aggcaccctctgccacttagacataatccattccactcattattccagcaaacacttact
gacaaatcgggtcctgagttgaaaacaccatttgtcaaagaggcctttgaagagacccct
aagaaacacagagagtgtttagttaaggacaaccagaagtacacatttacaatagataga
tgtgcaaaagacctttttgtagccaaacaagttggaacaaaactctcggtgaatgaacca
ctgtcattttctgttgagtctattcttaagaggccttcatctgccatcactcgtgtctct
cagtga

>gi568815589f:877002_1091002|GENSCAN_predicted_peptide_7|317_aa
XTLSTPCACILLTKVKWSKDDTLPKPDQSEFFPKMFNQTFLTFVQRVRGERGNSSDLLLL
KNDFNLAQWEAPGKCIQFYSPDHNHNIQFHHPQNVFVFLCSQSAPPTPPWPLATTSMFSV
IIALPTGWAMDQYQSVGRTAGEMQSTIREYYKHLYPNKLENLEEIDQFLDRYTFPRLKQE
EVESLNRLITSPSPEIEAVINNLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQTIEKE
GLLLNSFYEASIILIPKSGRDTTKKENFRPISLINIDAKILNKILANQIQRHIEKLIHHN
QLSFIPGMPAGSTYANQ

>gi568815589f:877002_1091002|GENSCAN_predicted_CDS_7|954_bp
ntaaccttatctacaccttgtgcctgcatcttactcaccaaggttaagtggtccaaggat
gacactctacccaagcctgaccaatcagagttttttcccaagatgtttaaccagacattt
cttacttttgtgcagcgggtacggggagaaaggggtaacagcagtgacctgttactcctg
aaaaatgactttaacttggcccaatgggaagcccctggcaaatgtatacagttttatagc
cccgatcacaatcataatatacaatttcatcacccccaaaatgtcttcgtgttcctttgt
agccaatcagctcccccgaccccaccttggcccctagcaaccacttctatgttttctgtc
attatagctttacccacaggctgggctatggaccagtaccagtctgtgggccgcacagca
ggagaaatgcaatctaccatcagagaatattataaacacctctacccaaataaactagaa
aatctagaagaaattgatcaattcctggacagatacaccttcccaagactaaaacaagaa
gaagttgaatccctcaatagactaataacaagtccaagtcctgaaattgaggcagtaatt
aataacctaccaaccaaaaaaagcccaggaccagatggatttacagccgaattctaccag
aggtacaaagaagagctggtaccattccttctgaaactattccaaacaatagaaaaagag
ggactcctccttaactcattttatgaggccagcatcatcctgataccaaaatctggcaga
gacacaacaaaaaaagaaaatttcaggccaatatccctgatcaacattgatgcaaaaatc
ctcaataaaatactggcaaaccaaatccagcggcacatcgaaaagcttatccaccacaat
caactcagcttcatccctgggatgccggctggttcaacatacgcaaaccaataa