GENSCAN 1.0	Date run:  8-Nov-116	Time: 16:36:30

Sequence gi568815590f:91149652_91494039 : 344388 bp : 36.32% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    183    178    6                               1.05
 1.01 Sngl -   1663    827  837  1  0   47   41   379 0.460  24.58
 1.00 Prom -   1977   1938   40                              -7.15

 2.00 Prom +   6264   6303   40                              -5.35
 2.01 Sngl +   8046   8873  828  2  0   92   44   669 0.538  58.38
 2.02 PlyA +   9327   9332    6                               1.05

 3.04 PlyA -   9883   9878    6                               1.05
 3.03 Term -  10306  10220   87  1  0   85   49    65 0.034  -1.02
 3.02 Intr -  44080  43781  300  1  0   10   86   137 0.145   1.71
 3.01 Init -  44954  44775  180  2  0   70   41   170 0.252   9.73
 3.00 Prom -  45901  45862   40                              -6.15

 4.02 PlyA -  45977  45972    6                               1.05
 4.01 Sngl -  46954  46298  657  1  0   71   43   352 0.769  24.92
 4.00 Prom -  50078  50039   40                              -6.25

 5.00 Prom +  61567  61606   40                              -3.95
 5.01 Init +  70439  70522   84  1  0   47   88    67 0.437   3.47
 5.02 Intr +  75124  75278  155  0  2   62   28   169 0.120   6.25
 5.03 Intr +  76168  76273  106  1  1  101   38    37 0.234  -0.70
 5.04 Term +  80778  80948  171  2  0  112   43    66 0.297   1.34
 5.05 PlyA +  82495  82500    6                               1.05

 6.00 Prom +  93651  93690   40                              -3.75
 6.01 Init + 100046 100183  138  1  0   74   60    86 0.011   4.59
 6.02 Intr + 112794 112910  117  2  0   54   40   105 0.130   2.04
 6.03 Intr + 132999 133058   60  2  0   54  111    53 0.003   2.21
 6.04 Intr + 139433 139595  163  1  1   89   90    27 0.718   1.63
 6.05 Intr + 145880 146052  173  0  2   20  111   147 0.571   8.94
 6.06 Intr + 155271 155352   82  2  1   99   58    11 0.013  -2.51
 6.07 Intr + 167111 167226  116  0  2   57   80    73 0.192   2.65
 6.08 Intr + 168565 168729  165  0  0  119   73    89 0.647   9.74
 6.09 Intr + 184644 184796  153  2  0   71  111   112 0.862  11.15
 6.10 Intr + 193702 193815  114  0  0   76   93    39 0.029   2.92
 6.11 Intr + 203250 203345   96  2  0   77  106    35 0.041   3.49
 6.12 Intr + 212702 212808  107  1  2  112   97    32 0.115   4.59
 6.13 Intr + 226824 226962  139  0  1   68   70    97 0.000   5.45
 6.14 Term + 241140 241325  186  2  0   64   33   134 0.107   2.01
 6.15 PlyA + 241723 241728    6                               1.05

 7.06 PlyA - 241828 241823    6                               1.05
 7.05 Term - 270451 270397   55  0  1   57   45   157 0.239   4.35
 7.04 Intr - 283238 283015  224  2  2   62   72   128 0.229   4.60
 7.03 Intr - 284947 284868   80  2  2   21   92    37 0.077  -4.25
 7.02 Intr - 290824 290716  109  1  1   79   75    83 0.165   5.04
 7.01 Init - 331717 331637   81  1  0   45   68    99 0.014   4.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100046 100193  148  1  1   74   90    96 0.869   8.70
S.002 Intr - 196218 196055  164  0  2   80   78   115 0.874   7.55
S.003 Term - 220740 220391  350  1  2   13   42   236 0.978   5.16
S.004 Init - 222323 222242   82  2  1   50  111    30 0.869   2.68
S.005 Term + 333700 333765   66  0  0  113   35   124 0.954   6.56


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:91149652_91494039|GENSCAN_predicted_peptide_1|278_aa
MFFETTENKDTTYQNLWDTCKALCRGKFIALNAHKTKQERSKIDTLTSQLKELEKQEQTH
SKASRRQEITKIRAELKEIETQKTLQKINESRSWFFEKINKIDRPLARLIKKKREKNETD
TIKNDKEDITNDPTEIQTTIREYYKHLYANKLESLEEMDKFLDTYTLPRLNQEEVESLNR
PITGSEIEAIINSLPTKKNPGPDGFTAEFYQRYKEELVPFLLKLFQSVEKERILPNSFYE
ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN

>gi568815590f:91149652_91494039|GENSCAN_predicted_CDS_1|837_bp
atgttctttgaaaccaccgagaacaaagacacaacataccagaatctctgggacacatgc
aaagcactgtgtagagggaaatttatagcactaaatgcccacaagacaaagcaggaaaga
tccaaaattgacaccctcacatcacaattaaaagaactagagaagcaagagcaaacacat
tcaaaagctagcagaaggcaagaaataactaagatcagagcagaactgaaggaaatagag
acacaaaaaacccttcaaaaaatcaatgaatccaggagctggttttttgaaaagatcaac
aaaattgatagaccactagcaagactaataaagaaaaaaagagagaagaatgaaacagac
acaataaaaaatgataaagaggatatcaccaacgatcccacagaaatacaaactaccatc
agagaatactataaacacctctatgcaaacaaactagaaagtctagaagaaatggataaa
ttcctcgacacatacactctcccaagactaaaccaggaagaagttgaatctctgaataga
ccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaaaaaaatcca
ggaccagatggattcacagccgaattctaccagaggtacaaagaggagctggtaccattc
cttctgaaactattccaatcagtagaaaaagagagaatcctccctaactcattttatgag
gccagcattatcctgataccaaagcctggcagagacacaacaaaaaaagagaattttaga
ccaatatccctgatgaacattgacgcaaaaatcctcaataaaatactggcaaactga

>gi568815590f:91149652_91494039|GENSCAN_predicted_peptide_2|275_aa
MKQKYTVNQCRWQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQNVSNAFL
DKGEFYIGSKYKKVVYRQYTDCTFRIPVERKAEEEHLGILGLQLHADVGDKVKIIFKNMT
TRPYSIHAHGVQTESSTFIPALPGETLTYLWKIPERSGAGTEDSACIPWAYYSTVDQVKD
LYSGLIGPLIVCRRHYLKVFNPRKKLEFTLLFLVFDENESWYLDDNIKTNSDHPKKVNKD
DEEFIESNKMHAVNGRMFGNPQGLTMHMGDEANGR

>gi568815590f:91149652_91494039|GENSCAN_predicted_CDS_2|828_bp
atgaagcaaaaatatactgtgaaccaatgcaggtggcagtctgaggattccaccttctac
ctgggagagaggacatactatatcgcagcagtggaagtggaatgggattattccccacaa
agggagtgggaaaaggagctgcatcatttacaagagcagaatgtttcaaatgcattttta
gataagggagagttttacataggctcaaagtacaagaaagttgtgtatcggcagtatact
gattgcacgttccgtattccagtggagagaaaagctgaagaagaacatctgggaattcta
ggtctacaacttcatgcagatgttggagacaaagtcaaaattatctttaaaaacatgacc
acaaggccctactcaatacatgcccatggggtacaaacggagagttctacatttattcca
gcattaccaggtgaaactctcacttacctatggaaaatcccagaaagatctggagctgga
acagaggattctgcttgtattccatgggcttactattcaactgtggatcaagttaaggat
ctctacagtggattaattggccccctgattgtttgtcgaagacattacttgaaagtattc
aatcccagaaagaaactggaatttacccttctgtttctagtttttgatgagaatgaatct
tggtatttagatgacaacatcaaaacaaactctgatcaccccaagaaagtaaacaaagat
gatgaggaattcatagaaagcaataaaatgcatgctgttaatggaagaatgtttggaaac
ccacaaggcctcacaatgcacatgggagatgaagccaatgggcgatga

>gi568815590f:91149652_91494039|GENSCAN_predicted_peptide_3|188_aa
MDKFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLLTKKSPGPDGFTAEFYQRYKEEL
LISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDL
FKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVGIDFYSKEQHQFTVVGDMT
IIFIPRTL

>gi568815590f:91149652_91494039|GENSCAN_predicted_CDS_3|567_bp
atggataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggatctgaaattgtggcaataatcaatagcttactaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
ctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagca
ttcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactcccattcaca
attgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctc
ttcaaggagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaag
aacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactacccaag
gtggggattgacttttattccaaggaacaacatcagttcactgttgttggagacatgaca
atcattttcatcccaagaacactctaa

>gi568815590f:91149652_91494039|GENSCAN_predicted_peptide_4|218_aa
MEDEMNEMKQEGKFREKRIKRNEQTLQEIWDYVKRPNLRLLGVPESDGENGTKLENTLQD
IIQENFPNLARQANVQIQEIQRTQQRYSSRRATPRHIIVRFTKLEMKEKMLRAAREKGRV
TLKGKPIRLTADLSGETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDK
QMLRDFVTTRPALKELLKEALNMERNNWYQPLQNHAKM

>gi568815590f:91149652_91494039|GENSCAN_predicted_CDS_4|657_bp
atggaagatgaaatgaatgaaatgaagcaagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaaccctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
cttggtgtacctgaaagtgatggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaata
cagagaacacaacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaacttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggtt
accctcaaagggaagcccatcagactaacagcagatctctcgggagaaaccctacaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaag
caaatgctgagagattttgtcactacaaggcctgccctaaaagagctcctgaaggaagcg
ctaaacatggaaaggaacaactggtaccagccgctgcaaaatcatgccaaaatgtaa

>gi568815590f:91149652_91494039|GENSCAN_predicted_peptide_5|171_aa
MKSMEHSKEILKPESKVQAPLRQRWGLKNDQEERLSLLVLRDCSHPSRGAQAQGDLNSVP
EPLAGVIGDPAGKPYPLKDGFQGTATWFLFLHVMATGISEVISDLLPVQLLLLWLCSEAP
MLFPPGDFLYAIPSNRKTVSPRWFLAHFGPIPVFTTVGPEASFLTSQDLYQ

>gi568815590f:91149652_91494039|GENSCAN_predicted_CDS_5|516_bp
atgaaatcaatggagcacagcaaagagatcctcaaaccagagagcaaagttcaggcccca
ctgagacagagatggggcctcaagaacgaccaggaggagaggctaagtctgctggtcctt
agagactgcagccacccctcccgaggagctcaggcccagggagatctgaattctgtccct
gagcctctggctggagttattggagatcctgcagggaagccctacccactgaaggatgga
ttccaaggtactgcaacctggtttctgttcctccatgtcatggcaactggcatttcagag
gtcatcagtgacttactcccagtccagctgctcctcctctggctgtgctctgaagctccc
atgctattcccacctggggactttctctatgcaattccctctaatcggaaaacagtttct
cccagatggttcctggcacattttggtcctattcctgtatttaccacagtgggaccagaa
gcaagttttctcacttctcaggacctctatcagtga

>gi568815590f:91149652_91494039|GENSCAN_predicted_peptide_6|602_aa
MHTPQCEDIIQWCRRRLPILDWAPHYNLKENLLPDTVSGIMLAVQQRLSSLQILVGKPEP
MEDSEKMHLADKRSKGRRHQPASWKRKLRETEGLVGSRSYHPESQTVSWGYKVVLITLVF
FTGLAFAVLSSVHPVFGLYGSLFPAIIYAIFGMGHHVATGTFALTSLISANAVERIVPQN
MQNLTTQSNTSVLGLSDFEMQRIHVAAAVSFLGGVIQVQLKHNHLREAFPGSLDILICDS
SYCSFSVTEFTQMHYAKVWAIFSKLSGKGRTLVIEVSGVRRGQVAMFVLQLGSATFVVTE
PVISAMTTGAATHVVTSQVKYLLGMKMPYISGPLGFFYIYAYVFENIKSVRLEALLLSLL
SIVVLVLVKELNEQFKRKIKVVLPVDLVLEFLAHGLSNIVSSFFFCIPSAAAMGRTAGLY
STGAKTQCVLASIIVVGLKGMLIQFRDLKKYWNVDKIDWGIWVSTYVFTICFAANVGLLF
GVVCTIAIVIGRFPRASFCMSSLVVDSFCALAFSDAACCSDISNVRAKTVSSAGLRVQRS
QDPETALRQKAAMIGGLTPFVHLSQETQPPCAALPGADCLNMVVVYFCPVVYFFVEEGIV
LY

>gi568815590f:91149652_91494039|GENSCAN_predicted_CDS_6|1809_bp
atgcataccccccagtgtgaagacattatacagtggtgtagaaggcgactgcccattttg
gattgggcaccacattacaatctgaaagaaaacttgcttccagacactgtgtctgggata
atgttggcagttcaacagcgtctgagcagtcttcagattttggtgggtaaacctgagccc
atggaagacagtgagaagatgcacctggctgacaagagaagtaagggaagaaggcatcag
ccagcatcatggaagaggaagttgagggaaacagaaggtctcgtaggttccaggtcctat
caccctgaatctcagactgtgtcttggggttataaggtggttttaattaccctagtcttc
ttcacaggattggcctttgctgttctctcatctgtgcacccagtgtttggtttatatggg
tctctgtttcctgccataatttatgccatatttggaatgggacatcatgttgccacaggc
acctttgccttgacatccttaatatcagccaacgccgtggaacggattgtccctcagaac
atgcagaatctcaccacacagagtaacacaagcgtgctgggcttatccgactttgaaatg
caaaggatccacgttgctgcagcagtttccttcttgggaggtgtgattcaggttcagctc
aaacataatcatctcagagaagccttccctggatctctggacatacttatatgtgattcc
tcttactgttccttttctgtgactgagtttacacagatgcattatgccaaagtgtgggcc
atcttctcaaagctctctggtaaaggaagaacattagtcattgaagtatcaggagttaga
agaggccaggtggccatgtttgtgctgcaactgggcagtgccacatttgtggtcacagag
cctgtgatcagcgcaatgacaactggggctgccacccatgtggtgacttcacaagtcaaa
tatctcttgggaatgaaaatgccatatatatccggaccacttggattcttttatatttat
gcatatgtttttgaaaacatcaagtctgtgcgactggaagcattgcttttatccttgctg
agcattgtggtccttgttcttgttaaagagctgaatgaacagtttaaaaggaaaattaaa
gttgttcttcctgtagatttagttttggaatttttggcccatggcctcagcaatatagtt
tcttcatttttcttctgcataccaagtgctgctgccatgggaaggacggctggcctgtac
agcacaggagcgaagacacagtgtgtccttgcaagcattattgttgtgggactgaaggga
atgctaatacagttccgagatttaaaaaaatattggaatgtggataaaatcgattgggga
atatgggtcagtacatatgtatttacaatatgctttgctgccaatgtgggactgctgttt
ggtgttgtttgtaccatagctatagtgataggacgcttcccaagggcaagtttctgcatg
agttccttggttgtggacagcttctgtgcactggctttctcagatgctgcctgttgtagt
gatatatcgaatgtaagagccaaaacagtatcttctgcagggctgagggtgcagagatct
caggacccagaaactgctttgcggcagaaagctgccatgatcggagggctcaccccattt
gtccacctttctcaggaaactcagccaccctgtgctgccctgcctggtgccgattgtcta
aacatggttgttgtatatttttgtccagttgtgtacttctttgtggaggaggggatagtc
ttgtattag

>gi568815590f:91149652_91494039|GENSCAN_predicted_peptide_7|182_aa
MSEEFLTGGNYNRRVGFLLDEKKEMVQQPAASETPSDTLFSDFSSTSVNGFPGCFNAPSR
QLPTSLANNLECHQEQIKIVSPRRNESLVWELQVLTSGPILLFDILFALFVGFTCKPQKN
INCESWYIWKLLKPLQNTHPSTDGERHTNYKIVVFDYTAQEPLESLQQQQQQQQQQTAIG
PL

>gi568815590f:91149652_91494039|GENSCAN_predicted_CDS_7|549_bp
atgagtgaagaatttctaactggaggaaactacaatcgtagagtaggatttctattagat
gagaagaaagaaatggtacagcagccagcagcatcagaaactcccagtgacacactcttc
agtgatttcagcagcacctcagtgaatggttttccagggtgtttcaatgcacccagcagg
cagcttcctaccagtttagcaaacaatctggaatgccaccaggaacaaattaaaatagtc
agtcctagaagaaatgaaagcctagtatgggagttacaagtgttgaccagtggccccatc
ctgctatttgacattttatttgcactgtttgttggctttacttgtaagccccaaaagaat
atcaactgtgaatcatggtatatttggaagttacttaaaccacttcagaacacccatccg
agcacggatggggagagacacactaactacaaaatagtggtatttgattatactgcacag
gaaccactggaaagcttacagcagcagcagcagcagcagcagcagcaaacagctattggc
cccttgtga