GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:06:21

Sequence gi568815590f:90970295_91184865 : 214571 bp : 36.41% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -    847    772   76  1  1   70   93   110 0.012   7.87
 1.05 Intr -   8358   8285   74  1  2   88   89   -16 0.009  -3.29
 1.04 Intr -  10167  10069   99  1  0   68  109    71 0.059   6.36
 1.03 Intr -  14733  14489  245  2  2    2   10   144 0.037  -5.78
 1.02 Intr -  14933  14820  114  1  0   36  123   111 0.928   8.04
 1.01 Init -  15785  15703   83  2  2   66   58    59 0.580   1.19
 1.00 Prom -  24120  24081   40                              -5.65

 2.12 PlyA -  24329  24324    6                               1.05
 2.11 Term -  25526  25383  144  2  0   86   43   112 0.907   3.43
 2.10 Intr -  26450  26360   91  1  1   73   74    54 0.511   1.58
 2.09 Intr -  45521  45443   79  0  1  115   64    74 0.277   5.39
 2.08 Intr -  48219  48137   83  2  2   72   82    60 0.561   2.16
 2.07 Intr -  49969  49863  107  1  2   74   99    29 0.974   0.69
 2.06 Intr -  51110  50962  149  0  2   71  127   135 0.966  14.73
 2.05 Intr -  55847  55751   97  2  1   43   56    50 0.146  -4.04
 2.04 Intr -  61171  61067  105  1  0   72   73    59 0.213   2.29
 2.03 Intr -  70181  70098   84  2  0   34   66   100 0.663   1.50
 2.02 Intr -  70475  70350  126  2  0   52   94    98 0.701   6.76
 2.01 Init -  70675  70523  153  1  0   89  -51   215 0.801   5.73
 2.00 Prom -  71038  70999   40                              -5.55

 3.00 Prom +  75380  75419   40                              -6.95
 3.01 Init +  78151  78470  320  0  2   71   51   258 0.276  17.25
 3.02 Term +  84349  84460  112  1  1   56   32   116 0.115  -0.15
 3.03 PlyA +  85405  85410    6                               1.05

 4.00 Prom +  87763  87802   40                              -5.85
 4.01 Init + 100091 100172   82  1  1   98  100   185 0.650  21.88
 4.02 Intr + 100844 100995  152  0  2   70   95   197 0.999  17.56
 4.03 Intr + 103537 103617   81  0  0  111   59    52 0.917   3.52
 4.04 Intr + 108062 108374  313  1  1   85   91   282 0.989  23.03
 4.05 Intr + 110375 110436   62  0  2   46  107    45 0.359  -0.27
 4.06 Intr + 121343 121525  183  1  0   24   67   120 0.031   2.56
 4.07 Intr + 132365 132550  186  1  0   62   94    95 0.024   6.46
 4.08 Intr + 150226 150317   92  0  2   29  103    88 0.074   2.27
 4.09 Term + 158790 158916  127  0  1   46   47   127 0.242   1.17
 4.10 PlyA + 159256 159261    6                               1.05

 5.05 PlyA - 159952 159947    6                               1.05
 5.04 Term - 172424 172264  161  0  2   60   44    96 0.684  -0.48
 5.03 Intr - 178100 177931  170  1  2   93   65    71 0.706   3.97
 5.02 Intr - 179594 179172  423  1  0    3   39   225 0.132   1.16
 5.01 Init - 181020 180386  635  0  2   47   72   364 0.344  25.56
 5.00 Prom - 181334 181295   40                              -7.15

 6.00 Prom + 185621 185660   40                              -5.35
 6.01 Sngl + 187403 188230  828  1  0   92   44   669 0.539  58.38
 6.02 PlyA + 188684 188689    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  14733  14325  409  2  1    2   32   201 0.822  -0.40
S.002 Sngl + 121237 121419  183  0  0  107   49   157 0.852   8.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:90970295_91184865|GENSCAN_predicted_peptide_1|231_aa
MVNPDSAPLKTVQCLPVHFQLSFWCLGTQRTSGRSRSPTGSRALGLRVWAERGDAAAPKS
PWILSRPDPGKVEARKRSSEVGREISQGPFSTLWTLNGSGMGARASDEGKESVGGQGSPT
EGQVAETKAIAKKGAKYTAPLGSAPAPVWNLKVFVTMETKKLIGKPLQPARPVRHLTSPP
GAVFPFNFQNEYPCNTQCIQSGVSRCKTNGMQAFSQGLNEQQQQQSPVKKX

>gi568815590f:90970295_91184865|GENSCAN_predicted_CDS_1|693_bp
atggtaaatcctgatagtgccccacttaaaaccgttcagtgtttgccagtgcattttcaa
ctgtccttttggtgcttggggacccagcggaccagcggcaggagccgttccccgacgggc
agcagggcgctcggcctccgcgtgtgggctgagcgcggcgacgctgctgccccgaaatcc
ccgtggattttgagtcggcccgaccccgggaaagttgaggcgaggaagagaagctctgag
gtgggtcgggaaatctctcagggccccttcagtaccctgtggaccctgaatgggagtggg
atgggagcgagagcgtcggatgaggggaaagaaagtgtagggggccaggggagcccgacg
gaggggcaagtggccgagaccaaagccatcgccaaaaaaggagctaagtacacagctccc
cttggctctgccccagcacctgtatggaacctcaaagtctttgtgacaatggaaaccaaa
aaattaattggtaaaccgcttcaaccagcaagacctgttcgtcatctgacttctccccca
ggagcagtgttccctttcaactttcaaaacgaatatccatgcaacactcagtgcatacaa
agtggagttagcagatgtaagacgaatggaatgcaagccttttctcaaggtcttaatgag
caacagcaacagcagtctccagttaagaaagnn

>gi568815590f:90970295_91184865|GENSCAN_predicted_peptide_2|405_aa
MPPSALPFPRLLVLHPPLPSPRFLPCDTSRALPEAAAAAAAAAAAAAEAAAAPPLPQSWL
LMGWTNARLCCQHPTPEMSLPPPHRTCKKAAPELLRRVFLVVVVMVVVVVVVMVVVVVVV
MGENLEDGMLQYDILLFERLSAKTDNPEEKQYREMINISWSRLTKPKCGLQSSCSSITKE
SKGGFGTEAELPPPYTAIASPDASGIPVINCRVCQSLINLDGKLHQHVVKCTVCNEATPI
KNPPTGKKYVRCPCNCLLICKDTSRRIGCPRPNCRRIINLGPVMLISEEQPAQPALPIQP
EESSKVLANQDKYRMRSPVPANRNQTQHSSVGSALPRRRCCAYITIGMICIFIGVGLTVG
TPDFARRFRATYVSWAIAYLLGLICLIRACYWGAIRVSYPEHSFA

>gi568815590f:90970295_91184865|GENSCAN_predicted_CDS_2|1218_bp
atgcctcccagcgcgcttcccttcccccgcctcctggtcctgcaccctcccctcccctcc
ccccgcttcctgccttgtgacacatcccgggccctcccggaggcggcagcagcagcagct
gcagcggcagcagcggcagcagaggcagcagcagccccgccgctgccgcagtcatggctg
ctgatggggtggacgaacgctcgcctctgctgtcagcatcccactccggaaatgtcactc
ccaccgccccaccgtacttgcaagaaagcagccccagagcttctccgcagggtttttctg
gtggtggtggtgatggtggtggtggtggtggtggtgatggtggtggtggtggtggtggtg
atgggggagaatttggaagacggcatgttacaatatgacattttattgtttgagagatta
agtgctaagactgacaatccagaggagaaacaatatagagaaatgataaacatatcctgg
agccggctgacaaaaccaaaatgtggtttgcagagttcctgctccagcatcacgaaagag
agtaaaggtggatttggaactgaggcggagctcccacctccatatacagccattgccagt
ccagacgccagtggtattccagtaataaactgccgtgtgtgccaatcactaatcaatttg
gatggcaagcttcaccagcatgtggttaagtgcacagtttgcaatgaagctacgccaatc
aaaaaccccccaacaggcaagaaatatgttagatgcccttgtaattgtcttctcatttgt
aaggacacatctcggcgaataggatgcccaagacccaactgtagacggataattaacctt
ggcccagtaatgcttatttctgaagaacaaccagctcagcctgcattgccaatccaacca
gaagaaagttctaaggtgttagccaatcaagacaaatacagaatgcgaagtcctgttcca
gccaatagaaaccagacacagcactcctcagtgggtagtgcacttccacgaagacgctgc
tgtgcatatattaccattggaatgatatgtattttcattggagttgggttaactgttggc
accccagattttgcaaggcgatttcgagcaacctatgtttcttgggcaattgcttatctc
ctaggattgatctgccttatccgagcttgttattggggagccataagagtcagttatcca
gaacacagttttgcataa

>gi568815590f:90970295_91184865|GENSCAN_predicted_peptide_3|143_aa
MEYTSKCKGLGGLDEVKQDAVDWEGFEITHLCVSSINPVFECLPLRGHCQWTVIIGPAIN
VKHRKEDFTNGPMNLSDSSLCPLTGEARISKREEEAENQRQNILSPIGCCNRALSCKQRM
TLTGHRFGWHLDLGLYSIQNCEK

>gi568815590f:90970295_91184865|GENSCAN_predicted_CDS_3|432_bp
atggagtataccagtaaatgcaagggccttggagggttagatgaggtgaagcaggacgct
gtggattgggaaggctttgaaataactcacctttgtgtctcctctataaatccagtattt
gagtgcctgccattgagagggcattgccaatggacagtcattattggcccagcaattaat
gtcaaacacaggaaagaagacttcactaatggcccaatgaatctttctgattcatccttg
tgtccgctcactggagaagctagaatatccaagagggaagaagaagctgagaaccagagg
caaaatatattgtccccaataggatgctgtaacagggcgctatcttgcaagcagagaatg
accctcactgggcaccgatttggctggcaccttgatcttggactttacagcatccaaaac
tgtgagaaataa

>gi568815590f:90970295_91184865|GENSCAN_predicted_peptide_4|425_aa
MEAVLTEELDEEEQLLRRHRKEKKELQAKIQGMKNAVPKNDKKRRKQLTEDVAKLEKEME
QKHREELEQLKLTTKENKIDSVAVNISNLVLENQPPRISKAQKRREKKAALEKEREERIA
EAEIENLTGARHMESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALR
SQTAEYMQSHVEDFLPFLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLETSFSVGTLGL
TLVICQGLLGLQLKTEGCTVGFPTFEVLGLGLASLLLILQMAYCGTSPYDRIMTERLLIK
ALSGGKNTKIITLNGKKMTKMPSALGKLPGLKTLVLQNNLIPKVCPELCNLTQHRGKGVG
LLCPGICHGVAAVWKDGAEAQPSRISVHGLGVKFGQVRVLHLNSSVMDSAAQAQEEDSMG
ILVTE

>gi568815590f:90970295_91184865|GENSCAN_predicted_CDS_4|1278_bp
atggaggcggtattgaccgaagagcttgatgaggaagagcagctgctgagaaggcatcgc
aaagagaagaaggagttgcaagccaaaattcagggcatgaagaatgctgttcccaagaat
gacaagaagaggaggaagcaactcaccgaagatgtggccaagttggaaaaagaaatggaa
cagaaacatagagaggaactggagcaattgaagctgactactaaggagaataagatagat
tctgttgctgttaacatttcaaacttggtgcttgagaatcagccacctcggatatcaaaa
gcacaaaagagacgggaaaagaaagctgcattggaaaaggagcgagaagaacggatagct
gaagctgaaattgaaaacttaacaggagccagacatatggaaagtgagaaacttgctcaa
atattggcagctagacagttagaaattaaacagattccatctgatggccactgtatgtat
aaagccattgaagatcaactgaaagaaaaggattgtgctctgactgtggttgccttgaga
agtcagaccgctgagtatatgcaaagccatgtggaagactttctgccatttttaacaaac
cctaatacaggagatatgtatactccagaagaatttcagaagtactgtgaagatattgta
aacacagctgcatggggaggtcagcttgagacttcattcagcgttgggactcttggactt
accctagtgatttgccaggggctcttgggccttcagctaaaaactgaaggctgcactgtt
ggcttccctacttttgaggttttgggactcggactggcttccttgctcctcatcttgcag
atggcctattgtgggacttcaccttatgatcgtatcatgactgagagattgttaataaaa
gcattgagtggtggtaaaaatacgaagatcattactttgaatgggaagaagatgacaaag
atgccctcagcattaggaaaactgcctggcctgaagactctagtccttcagaataaccta
atccccaaagtgtgtccagagttatgcaacttgacccagcacagaggcaaaggggttggg
ctgttatgtcctggcatctgccatggtgtagcagctgtctggaaggatggagcagaggca
caaccttccagaatatcagttcatggacttggagtcaaatttgggcaggtaagagtttta
cacctaaacagctctgtcatggacagcgctgcacaggcacaggaagaggacagcatgggc
atcctggtgacagaatga

>gi568815590f:90970295_91184865|GENSCAN_predicted_peptide_5|462_aa
MFFETTENKDTTYQNLWDTCKALCRGKFIALNAHKTKQERSKIDTLTSQLKELEKQEQTH
SKASRRQEITKIRAELKEIETQKTLQKINESRSWFFEKINKIDRPLARLIKKKREKNETD
TIKNDKEDITNDPTEIQTTIREYYKHLYANKLESLEEMDKFLDTYTLPRLNQEEVESLNR
PITGSEIEAIINSLPTKKNPGPDGFTAEFYQRQTESQIMSELPLTTASKRIKYLGIQLTR
DVKDLFKENYKPLLNEVKEDTNKWKNIPCSWVGRINIMKMAILPKVIYRFNAIPIKLTMT
FFTELEKTTLKFIWNQKRAHSAKSIQNQKNKAGGITLPDFKLYYKATVTKTAWDMDEAGN
HHSQQTITRTKNQTLHVLTHRWELNNENTWTQEGEHHTLGPDVGWGERGGQWFSKCSSWT
YSISITKEHNRNANLWDPQPTDSEILEGGPSLLGFKKASRGF

>gi568815590f:90970295_91184865|GENSCAN_predicted_CDS_5|1389_bp
atgttctttgaaaccaccgagaacaaagacacaacataccagaatctctgggacacatgc
aaagcactgtgtagagggaaatttatagcactaaatgcccacaagacaaagcaggaaaga
tccaaaattgacaccctcacatcacaattaaaagaactagagaagcaagagcaaacacat
tcaaaagctagcagaaggcaagaaataactaagatcagagcagaactgaaggaaatagag
acacaaaaaacccttcaaaaaatcaatgaatccaggagctggttttttgaaaagatcaac
aaaattgatagaccactagcaagactaataaagaaaaaaagagagaagaatgaaacagac
acaataaaaaatgataaagaggatatcaccaacgatcccacagaaatacaaactaccatc
agagaatactataaacacctctatgcaaacaaactagaaagtctagaagaaatggataaa
ttcctcgacacatacactctcccaagactaaaccaggaagaagttgaatctctgaataga
ccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaaaaaaatcca
ggaccagatggattcacagccgaattctaccagagacaaacagagagccaaatcatgagt
gaactcccattgacaactgcttcaaagagaataaaatacctaggaatccaacttacaagg
gacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaagtaaaagaggat
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcatgaaaatg
gccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaacaatgact
ttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccac
agtgccaagtcgatccaaaaccaaaagaacaaagctggaggcatcacgctacctgacttc
aaactatactacaaggctacagtaaccaaaacagcatgggacatggatgaagctggaaac
catcattctcagcagactatcacaaggacaaaaaaccaaacactgcatgttcttactcat
aggtgggaattgaacaatgagaacacatggacacaggaaggggaacatcacacactgggg
cctgatgtggggtggggggagcggggaggccaatggttttccaagtgtagttcctggact
tacagcatcagcattaccaaagaacataacagaaatgcaaacctgtgggatccccagcct
actgactcagaaatcctagaaggagggcctagccttctgggttttaagaaggcatccagg
ggattctga

>gi568815590f:90970295_91184865|GENSCAN_predicted_peptide_6|275_aa
MKQKYTVNQCRWQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQNVSNAFL
DKGEFYIGSKYKKVVYRQYTDCTFRIPVERKAEEEHLGILGLQLHADVGDKVKIIFKNMT
TRPYSIHAHGVQTESSTFIPALPGETLTYLWKIPERSGAGTEDSACIPWAYYSTVDQVKD
LYSGLIGPLIVCRRHYLKVFNPRKKLEFTLLFLVFDENESWYLDDNIKTNSDHPKKVNKD
DEEFIESNKMHAVNGRMFGNPQGLTMHMGDEANGR

>gi568815590f:90970295_91184865|GENSCAN_predicted_CDS_6|828_bp
atgaagcaaaaatatactgtgaaccaatgcaggtggcagtctgaggattccaccttctac
ctgggagagaggacatactatatcgcagcagtggaagtggaatgggattattccccacaa
agggagtgggaaaaggagctgcatcatttacaagagcagaatgtttcaaatgcattttta
gataagggagagttttacataggctcaaagtacaagaaagttgtgtatcggcagtatact
gattgcacgttccgtattccagtggagagaaaagctgaagaagaacatctgggaattcta
ggtctacaacttcatgcagatgttggagacaaagtcaaaattatctttaaaaacatgacc
acaaggccctactcaatacatgcccatggggtacaaacggagagttctacatttattcca
gcattaccaggtgaaactctcacttacctatggaaaatcccagaaagatctggagctgga
acagaggattctgcttgtattccatgggcttactattcaactgtggatcaagttaaggat
ctctacagtggattaattggccccctgattgtttgtcgaagacattacttgaaagtattc
aatcccagaaagaaactggaatttacccttctgtttctagtttttgatgagaatgaatct
tggtatttagatgacaacatcaaaacaaactctgatcaccccaagaaagtaaacaaagat
gatgaggaattcatagaaagcaataaaatgcatgctgttaatggaagaatgtttggaaac
ccacaaggcctcacaatgcacatgggagatgaagccaatgggcgatga