GENSCAN 1.0	Date run: 18-Nov-116	Time: 17:35:20

Sequence gi568815590r:85948465_86169622 : 221158 bp : 38.66% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -      8      3    6                              -3.84
 1.02 Term -    400    217  184  0  1   74   43   141 0.289   4.23
 1.01 Init -    642    584   59  0  2   93   61   114 0.285  10.03
 1.00 Prom -   5733   5694   40                              -4.45

 2.06 PlyA -   5965   5960    6                               1.05
 2.05 Term -  13389  13160  230  1  2   74   54   106 0.579   1.61
 2.04 Intr -  15977  15898   80  1  2   95   85    52 0.210   3.88
 2.03 Intr -  25817  25793   25  0  1   90   61    27 0.007  -3.63
 2.02 Intr -  39967  39779  189  2  0  108   43   143 0.559  10.44
 2.01 Init -  42057  42039   19  0  1   65   75    21 0.538  -1.25
 2.00 Prom -  42775  42736   40                              -5.55

 3.04 PlyA -  43261  43256    6                               1.05
 3.03 Term -  54220  54134   87  1  0   82   50   123 0.886   4.58
 3.02 Intr -  67692  67492  201  0  0   -4   82   267 0.437  15.46
 3.01 Init -  72230  72183   48  2  0   85  119    -2 0.780   3.61
 3.00 Prom -  73541  73502   40                              -5.35

 4.00 Prom +  77555  77594   40                              -4.15
 4.01 Init +  87883  88047  165  0  0   65   42    98 0.604   2.58
 4.02 Intr +  92315  92556  242  1  2   42   76   188 0.843   8.43
 4.03 Term +  92642  92879  238  2  1   57   42   146 0.853   1.56
 4.04 PlyA +  93200  93205    6                               1.05

 5.00 Prom +  93683  93722   40                              -7.35
 5.01 Sngl +  94817  95089  273  1  0   46   42   229 0.723   9.18
 5.02 PlyA +  95100  95105    6                               1.05

 6.07 PlyA -  95698  95693    6                               1.05
 6.06 Term - 100303  99998  306  1  0   64   47   119 0.143  -0.47
 6.05 Intr - 116167 115501  667  0  1   95   94   559 0.990  48.01
 6.04 Intr - 120489 120383  107  0  2   28   59    92 0.509  -1.61
 6.03 Intr - 121354 120974  381  1  0   24  103   231 0.064  12.38
 6.02 Intr - 126749 126604  146  0  2   70    9   179 0.052   7.28
 6.01 Init - 127718 127523  196  2  1   81   32    85 0.719   1.34
 6.00 Prom - 127895 127856   40                              -3.65

 7.00 Prom + 128187 128226   40                              -7.65
 7.01 Init + 129254 129433  180  1  0   70   41   120 0.019   4.81
 7.02 Intr + 150440 150644  205  1  1   92  115   244 0.855  25.35
 7.03 Intr + 162381 162430   50  1  2   46   99    45 0.382  -1.12
 7.04 Intr + 173090 173227  138  1  0    6   63   274 0.801  16.44
 7.05 Intr + 185202 185278   77  2  2   15   87    98 0.172  -0.21
 7.06 Intr + 190993 191171  179  1  2   95   63   158 0.798  12.64
 7.07 Intr + 192986 193065   80  0  2   69   90    53 0.644   1.95
 7.08 Intr + 201648 201824  177  2  0   21   30   224 0.019   9.09
 7.09 Intr + 203002 203076   75  0  0   84   64    88 0.903   4.79
 7.10 Intr + 204352 204394   43  0  1  136   78     4 0.834   1.09
 7.11 Intr + 208982 209123  142  0  1   72   64    99 0.051   4.39
 7.12 Intr + 215409 215531  123  0  0   74   97    40 0.035   2.28
 7.13 Term + 217152 217290  139  0  1   37   39    97 0.027  -3.85
 7.14 PlyA + 217317 217322    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 126749 126559  191  0  2   70   45   185 0.838   9.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:85948465_86169622|GENSCAN_predicted_peptide_1|80_aa
MEESPVEGEVEVRESLQAATYWQKQPGERVTSVRMLQWILKMRPLEVSANYTLEGAQLLL
RGTASWLLSGKATQAREGNR

>gi568815590r:85948465_86169622|GENSCAN_predicted_CDS_1|243_bp
atggaggaaagtcccgtggaaggtgaagtagaagtcagggaaagccttcaagcagcaacg
tactggcagaagcaacctggggagagagtcacctcagtgcgaatgctccagtggatccta
aaaatgcggccgctggaagtgtcagccaactacacacttgaaggggcacagcttcttctg
aggggcacagcttcatggctgctcagtgggaaagccacacaggctagagaggggaacaga
tga

>gi568815590r:85948465_86169622|GENSCAN_predicted_peptide_2|180_aa
MGQRTGGNRVLCCDKGHKMVSEEPGQNLMLLSPLPSALRTQTPQEELSHLNYVRCLGAGS
PSRVLELAIEKVYRTPEGNKGTGQHNPQEMFHDMKEYHESCYTAVLKSESQVCPNSGWKG
ELQGLGGAFGIGDHVVAVLGKYSLLQPTNRRLQEKVYARRLPNFSGNENVISSILVRNWK

>gi568815590r:85948465_86169622|GENSCAN_predicted_CDS_2|543_bp
atggggcagaggacaggaggaaacagagttctttgctgtgataaaggccacaagatggtc
agtgaagagccaggacagaacttgatgctgcttagccccttgcccagtgctctccgcaca
caaactccacaagaagagctttcccatttgaactatgttagatgtctgggagcaggaagc
ccctcacgggtgctggagcttgctatagaaaaggtttacagaacgccagagggaaacaaa
gggacaggacaacataacccacaggaaatgttccatgacatgaaagaatatcatgaaagc
tgctatacagctgtgcttaagagtgagtcacaagtttgcccaaattcaggatggaagggg
gagctgcaaggtcttggaggagcatttgggataggggatcatgttgtggctgtccttgga
aaatacagtctgctgcagcctactaatcgcaggttgcaggagaaggtctacgccagaaga
ctgccaaatttctcaggaaatgaaaatgtgatttctagcattttagtgagaaactggaaa
tga

>gi568815590r:85948465_86169622|GENSCAN_predicted_peptide_3|111_aa
MTGERSGILLFRCSDLDCPPKLTSWGTKGWKSRQGIGTSTDDSDGGHDDDDGDGDSYGKD
KATSIYLALTVDQVLSLGGGKRKAFAGVNSHYEARTLMATQQEKSPIGEYN

>gi568815590r:85948465_86169622|GENSCAN_predicted_CDS_3|336_bp
atgacaggtgagagatctggcatcttactgttcagatgcagtgatctggattgcccaccg
aagctaaccagctggggaacaaagggctggaaatccagacaaggaattggcacttctaca
gatgacagtgatggtggtcatgatgatgatgatggcgatggtgacagttatggtaaggac
aaagcaactagtatttatttagcactaactgtggaccaggttctcagtctaggcggtggg
aaacgaaaggcatttgcaggtgttaattcccattatgaggcacgcacactgatggctaca
cagcaggaaaaatctcctattggagaatacaattga

>gi568815590r:85948465_86169622|GENSCAN_predicted_peptide_4|214_aa
MQLAQTLDVFIIIVYMNGKSPTDPLTSDNVPPPLIAYYSYKEFLRTLEDMGSSRQQAPIS
EENPGGIQGYALIPPPCGGEAASVQRVCGTGCQPSPLAASSPTWLCPELALQAATLQVMS
RVGPGITAVQCKPKSGNPDKHGAPSLDHVLLSSLDLFSSNYPLADIEGHYEQEPVETAHC
VYYEDVADCIALVNYIVHPPWEIPQEILFSLGQE

>gi568815590r:85948465_86169622|GENSCAN_predicted_CDS_4|645_bp
atgcagctagcacaaaccttggatgtttttatcatcatagtttatatgaacggaaaaagt
cctacagaccctttaacaagtgacaatgtgccacctccactcatagcttattatagctac
aaggagttccttagaaccctagaggacatgggttcttcccgacagcaggctccaatttct
gaagaaaatcctggtggcatccaaggatatgccctcatcccacctccatgtggaggggag
gcagcttctgtccagcgtgtgtgtggcacaggttgtcagcccagcccactggctgccagc
tcacccacatggctgtgccctgagctggcactgcaggcagccaccttgcaggtaatgtca
cgtgtaggacctggaatcactgctgtgcagtgcaaaccaaaatcaggtaatccagacaaa
catggagctccatccctggaccatgttcttttgagctccctggacttgttttcatcaaat
tacccactggccgacattgagggacattatgaacaagaacctgtggaaactgctcactgt
gtttactacgaggatgttgctgattgcattgcacttgttaattacattgtacatcctccc
tgggagatcccacaagaaattcttttcagtctgggtcaggaatga

>gi568815590r:85948465_86169622|GENSCAN_predicted_peptide_5|90_aa
MGATKKHKAHAADGFRKFLVHNAKELEVLLMCNKSYFAEITHNVSFQNRKATWKGPPSWP
SESPTTMPGCAAKKMKRQLMCMFCVSIKPP

>gi568815590r:85948465_86169622|GENSCAN_predicted_CDS_5|273_bp
atgggcgcaacaaaaaaacacaaagcacatgctgctgatggcttccggaagttcctggtc
cacaacgccaaggagctggaagtgctgctgatgtgcaacaaatcttactttgctgagatc
actcacaatgtttccttccagaaccgcaaagccacatggaaagggccacccagctggcca
tcagagtcaccaaccacaatgccaggttgtgcagcaaagaaaatgaagagacagctcatg
tgcatgttttgtgtttcaataaaaccaccataa

>gi568815590r:85948465_86169622|GENSCAN_predicted_peptide_6|600_aa
MGESGNHHFQQTNTGTENQTAHVLTHKWELDNENIWAQGGEHHKLGPVMGWKARSGKTLG
EIPNVGTLTLLTGYGGCQLPCCKDTQAAYGETHVVRSGGLLPTASWELRPADSHTVTSDD
PGVSVVSGYPGGCLPDHDPPVGFLSEGPAPRSCSLIKGGGTGLAASRVPRSRERRACCGY
GVRRQQEGGPGATSAGLGQARRSKPSRRRRRGAWARGGGPGGAEDTGGSLPSQVRPPGPC
QCPVQFLFDISEQGVQRMGKKRAGAAANKGRNSYLRRYDIKALIGTGSFSRVVRVEQKTT
KKPFAIKVMETREREGREACVSELSVLRRVSHRYIVQLMEIFETEDQVYMVMELATGGEL
FDRLIAQGSFTERDAVRILQMVADGIRYLHALQITHRNLKPENLLYYHPGEESKILITDF
GLAYSGKKSGDWTMKTLCGTPEYIAPEVLLRKPYTSAVDMWALGVITYALLSGFLPFDDE
SQTRLYRKILKGKYNYTGEPWPSISHLAKDFIDKLLILEAGHRMSAGQALDHPWVITMAA
GSSMKNLQRAISRNLMQRASPHSQSPGSAQSSKSHYSHKSRHMWSKRNLRIVESPLSALL

>gi568815590r:85948465_86169622|GENSCAN_predicted_CDS_6|1803_bp
atgggtgaaagtggaaaccatcattttcagcaaactaacacaggaacagaaaaccaaaca
gcacatgttctcactcataagtgggagttggacaatgaaaacatatgggcacagggaggg
gaacatcacaaactgggacctgtcatgggttggaaggctaggagtgggaaaacattagga
gaaatacctaacgtaggcacactcacactcctcactggctatgggggatgccagctgcca
tgctgcaaggacactcaggcagcctatggagaaacccacgtggtgcggagtggaggcctt
ctgccaacagccagctgggaactgaggcctgctgacagtcacacggtgaccagcgatgat
ccaggcgtctcggtcgttagcgggtatcctgggggctgtctccctgaccacgacccccca
gtggggtttctttccgagggtcccgcccctcgcagctgctctttgataaagggcggagga
acggggctggctgcttcccgagtccccaggtcccgcgagcggcgggcgtgttgcgggtat
ggggtgcggcgccagcaggaaggtggtcccggggccaccagcgctggcttgggccaagca
cgaaggtcaaaaccaagccggcgtcggaggcgcggggcctgggcccgaggcggcggccca
ggcggcgcagaggatacaggtggctcgcttccgagccaagttcgacccccgggtccttgc
cagtgcccagtacaatttctctttgacatctctgaacagggagttcagaggatgggaaaa
aagagagcaggagcagcagcaaacaagggaaggaattcctatcttcggagatatgacatc
aaagctcttattgggacaggcagtttcagcagggttgtcagggtagagcagaagaccacc
aagaaaccttttgcaataaaagtgatggaaaccagagagagggaaggtagagaagcgtgc
gtgtctgagctgagcgtcctgcggcgggttagccatcgttacattgtccagctcatggag
atctttgagactgaggatcaagtttacatggtaatggagctggctaccggaggggagctc
tttgatcgactcattgctcagggatcctttacagagcgggatgccgtcaggatcctccag
atggttgctgatgggattaggtatttgcatgcgctgcagataactcataggaatctaaag
cctgaaaacctcttatactatcatccaggtgaagagtcgaaaattttaattacagatttt
ggtttggcatactccgggaaaaaaagtggtgactggacaatgaagacactctgtgggacc
ccagagtacatagctcctgaggttttgctaaggaagccttataccagtgcagtggacatg
tgggctcttggtgtgatcacatatgctttacttagcggattcctgccttttgatgatgaa
agccagacaaggctttacaggaagattctgaaaggcaaatataattatacaggagagcct
tggccaagcatttcccacttggcgaaggactttatagacaaactactgattttggaggct
ggtcatcgcatgtcagctggccaggccctggaccatccctgggtgatcaccatggctgca
gggtcttccatgaagaatctccagagggccatatcccgaaacctcatgcagagggcctct
ccccactctcagagtcctggatctgcacagtcttctaagtcacattattctcacaaatcc
aggcatatgtggagcaagagaaacttaaggatagtagaatcgccactgtctgcgcttttg
taa

>gi568815590r:85948465_86169622|GENSCAN_predicted_peptide_7|535_aa
MDKFLDTYTLPSLNQEEVESLNKPITSSEIEAVINSLPTKESPGPDGLTAEFYQRYKEEL
ASANLQGPSRTTELFHPTLASISSPMLEGAELYFNVDHGYLEGLVRGCKASLLTQQDYIN
LVQCETLEGQDRTGQDWHHKTSARQSKTPPFQKKEEEEEEEEEEEEEKEKEGKGEGEGEG
GKKKEYTNGGKCHGKNCNPTPVSKCSMGTQMSTLTRLCSYMIDNVILLMNGALQKKSVKE
ILGKCHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNK
LYKFEADRRAFIITLNSFGTELSKEDRETLYPTFGKLYPEGLRLLAQAEDFDQMKNVADH
YGVYKPLFEAVGGSGGKTLEDVFYEREVQMNVLAFNRQFHYVAFPLTPPFSSVIRAAVFS
FHHLLNVWSVIEIQLITALLNINDIWLLIVTRSSGSHLTNYPVQQKESLLSNSNKNVLGL
PVTGLPRHFRNGKGQDSEFEKVSLPHSESIEQHFRKDPCCPFTDESLEHTAMFST

>gi568815590r:85948465_86169622|GENSCAN_predicted_CDS_7|1608_bp
atggataaattcctggacacatacaccctcccaagtctaaaccaggaagaagtcgaatca
ctgaataaaccaataacaagttctgaaattgaggcagtaattaatagcctaccaaccaaa
gaaagtccaggaccagatggactcacagctgaattctaccagaggtacaaagaggagctg
gctagtgcaaatcttcaggggccgtccaggactacagagctgtttcaccctaccttggct
tcaatctcttcccccatgctcgaaggtgcggagctgtacttcaacgtggaccatggctac
ctggagggcctggttcgaggatgcaaggccagcctcctgacccagcaagactatatcaac
ctggtccagtgtgagaccctagaaggacaggacaggacaggacaggactggcatcataag
acctccgccaggcagagcaagactccaccatttcaaaagaaggaggaggaggaggaggag
gaggaggaggaggaggaggagaaggagaaagaaggaaaaggagaaggagaaggagaagga
ggaaagaaaaaagaatatacaaatggtggaaagtgccatgggaaaaactgcaaccccacc
cctgtcagcaaatgctcgatggggacccagatgtctacccttacccggctgtgcagttat
atgatagacaatgtgattctgctgatgaatggtgcattgcagaaaaaatctgtgaaagaa
attctggggaagtgccaccccttgggccgtttcacagaaatggaagctgtcaacattgca
gagacaccttcagatctctttaatgccattctgatcgaaacgccattagctccattcttc
caagactgcatgtctgaaaatgctctagatgaactgaatattgaattgctacgcaataaa
ctatacaagtttgaggccgacagacgtgcttttatcatcactcttaactcctttggcact
gaattgagcaaagaagaccgagagaccctctatccaaccttcggcaaactctatcctgag
gggttgcggctgttggctcaagcagaagactttgaccagatgaagaacgtagcggatcat
tacggagtatacaaacctttatttgaagctgtaggtggcagtgggggaaagacattggag
gacgtgttttacgagcgtgaggtacaaatgaatgtgctggcattcaacagacagttccac
tacgtggcttttccactgactccccctttctcctcagtcattcgtgctgcagttttcagc
ttccaccacttgctgaacgtttggtcagtaattgaaatccaactcatcacagccctactc
aacatcaatgacatctggctccttattgtcacaaggagctcaggctcccatctcaccaac
tacccagtccagcagaaagagtccctcttgtccaatagcaacaaaaatgttctgggtttg
ccagtgactggtctgccaaggcacttcagaaatggaaaaggccaagattctgaatttgaa
aaggtgtcactgcctcactcagaaagcatagagcaacactttagaaaggacccctgctgt
cccttcactgatgaatcactggagcatactgcaatgttcagcacatag