GENSCAN 1.0	Date run:  6-Nov-116	Time: 02:23:16

Sequence gi568815591r:101215137_101421709 : 206573 bp : 50.51% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -    884    772  113  0  2   74   49   247 0.997  19.50
 1.04 Intr -   1190   1027  164  1  2  103   89   254 0.983  26.62
 1.03 Intr -   1410   1274  137  0  2   77   65   154 0.999  11.37
 1.02 Intr -   1650   1559   92  1  2   76   76   161 0.988  13.41
 1.01 Init -   2138   2030  109  2  1  106   94   228 0.988  23.58
 1.00 Prom -   4151   4112   40                              -4.06

 2.00 Prom +   4903   4942   40                             -12.30
 2.01 Init +   5398   5476   79  0  1   57   92     1 0.513  -1.38
 2.02 Intr +   7468   7638  171  2  0   75   81   295 0.921  27.41
 2.03 Intr +   8341   8420   80  2  2   46   94    75 0.999   3.17
 2.04 Intr +   8537   8706  170  1  2   73   99   147 0.993  13.04
 2.05 Term +   8801   8822   22  2  1  143   52    17 0.958   1.38
 2.06 PlyA +   9033   9038    6                               1.05

 3.06 PlyA -   9293   9288    6                               1.05
 3.05 Term -  17379  17274  106  2  1   94   43   194 0.999  13.38
 3.04 Intr -  17584  17468  117  0  0   93   99    73 0.997   8.48
 3.03 Intr -  17778  17697   82  1  1   90   89   182 0.806  17.20
 3.02 Intr -  19306  19142  165  2  0   49   50   184 0.792  10.63
 3.01 Init -  22445  22229  217  2  1   96   60   377 0.981  34.35
 3.00 Prom -  22898  22859   40                             -10.74

 4.06 PlyA -  24501  24496    6                               1.05
 4.05 Term -  24767  24670   98  0  2  141   49   121 0.999  11.63
 4.04 Intr -  25111  25006  106  1  1   28   56   240 0.663  14.59
 4.03 Intr -  25770  25694   77  1  2  108  100   149 0.998  17.33
 4.02 Intr -  29003  28871  133  2  1   93   72   301 0.949  29.22
 4.01 Init -  29868  29824   45  0  0  101   81   129 0.860  14.19
 4.00 Prom -  58091  58052   40                              -5.26

 5.04 PlyA -  58137  58132    6                               1.05
 5.03 Term -  63759  63656  104  1  2  109   34    61 0.118   1.24
 5.02 Intr -  72607  72347  261  2  0  116   73   274 0.717  26.16
 5.01 Init -  74628  74553   76  0  1   72  101   127 0.795  11.66
 5.00 Prom -  77235  77196   40                              -8.96

 6.09 PlyA -  77318  77313    6                               1.05
 6.08 Term -  79782  79676  107  1  2   92   49    66 0.011   1.67
 6.07 Intr -  87578  87550   29  1  2   79   89    51 0.001   2.06
 6.06 Intr -  88075  87952  124  2  1  100   32   134 0.082   8.64
 6.05 Intr -  93660  93481  180  1  0   99   46    86 0.080   5.34
 6.04 Intr - 101406 101204  203  2  2  147   47   148 0.801  15.53
 6.03 Intr - 103077 102988   90  2  0  120   44   105 0.985   8.41
 6.02 Intr - 103896 103820   77  0  2   60   83    65 0.816   1.51
 6.01 Init - 106573 106535   39  1  0   60  107    65 0.832   5.91
 6.00 Prom - 123836 123797   40                              -3.16

 7.00 Prom + 140960 140999   40                              -5.06
 7.01 Init + 147897 148054  158  2  2   89  117   396 0.996  39.98
 7.02 Intr + 163776 163883  108  0  0   40   64    83 0.074   0.50
 7.03 Intr + 164384 164421   38  2  2  128   92    32 0.737   5.51
 7.04 Intr + 178338 178379   42  1  0   80   59    65 0.004   1.01
 7.05 Intr + 184776 184829   54  1  0   86   80    26 0.138   0.55
 7.06 Intr + 185757 185892  136  1  1   55   89    23 0.112  -1.27
 7.07 Intr + 186729 186820   92  0  2   78   97    62 0.633   5.74
 7.08 Intr + 190667 190769  103  0  1   17   75    60 0.081  -3.17
 7.09 Intr + 204841 204963  123  1  0  115   98   152 0.675  18.60

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  87678  87735   58  2  1   91   94   110 0.880  11.38
S.002 Term - 100146  99998  149  1  2   71   42   102 0.847   1.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:101215137_101421709|GENSCAN_predicted_peptide_1|205_aa
MTSSGPGPRFLLLLPLLLPPAASASDRPRGRDPVNPEKLLVITVATAETEGYLRFLRSAE
FFNYTVRTLGLGEEWRGGDVARTVGGGQKVRWLKKEMEKYADREDMIIMFVDSYDVILAG
SPTELLKKFVQSGSRLLFSAESFCWPEWGLAEQYPEVGTGKRFLNSGGFIGFATTIHQIV
RQWKYKDDDDDQLFYTRLYLDPGLR

>gi568815591r:101215137_101421709|GENSCAN_predicted_CDS_1|615_bp
atgacctcctcggggcctggaccccggttcctgctgctgctgccgctgctgctgccccct
gcggcctcagcctccgaccggccccggggccgagacccggtcaacccagagaagctgctg
gtgatcactgtggccacagctgaaaccgaggggtacctgcgtttcctgcgctctgcggag
ttcttcaactacactgtgcggaccctgggcctgggagaggagtggcgagggggtgatgtg
gctcgaacagttggtggaggacagaaggtccggtggttaaagaaggaaatggagaaatac
gctgaccgggaggatatgatcatcatgtttgtggatagctacgacgtgattctggccggc
agccccacagagctgctgaagaagttcgtccagagtggcagccgcctgctcttctctgca
gagagcttctgctggcccgagtgggggctggcggagcagtaccctgaggtgggcacgggg
aagcgcttcctcaattctggtggattcatcggttttgccaccaccatccaccaaatcgtg
cgccagtggaagtacaaggatgatgacgacgaccagctgttctacacacggctctacctg
gacccaggactgagg

>gi568815591r:101215137_101421709|GENSCAN_predicted_peptide_2|173_aa
MILSHTAVVRVKWFKCCKELSTCLAHIRSQDPGQRRVLDRAARQRRINRQLEALENDNFQ
DDPHAGLPQLGKRLPQFDDDADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSVAEGPNY
LTACAGPPSRPQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV

>gi568815591r:101215137_101421709|GENSCAN_predicted_CDS_2|522_bp
atgatactgtcccatacagctgttgtaagggttaaatggttcaagtgttgcaaagagctg
agcacgtgcctggctcatattcgctcccaggaccccgggcagcggcgggtgctggaccgg
gctgcccggcagcgtcgcatcaaccggcagctggaggccctggagaatgacaacttccag
gatgacccccacgcgggactccctcagctcggcaagagactgcctcagtttgatgacgat
gcggacactggaaagaaaaagaagaaaacccgaggtgatcattttaaacttcgcttccga
aaaaactttcaggccctgttggaggagcagaacttgagtgtggccgagggccctaactac
ctgacggcctgtgcgggacccccatcgcggccccagcgccccttctgtgctgtctgtggc
ttcccatccccctacacctgtgtcagctgcggtgcccggtactgcactgtgcgctgtctg
gggacccaccaggagaccaggtgtctgaagtggactgtgtga

>gi568815591r:101215137_101421709|GENSCAN_predicted_peptide_3|228_aa
MSMAVETFGFFMATVGLLMLGVTLPNSYWRVSTVHGNVITTNTIFENLWFSCATDSLGVY
NCWEFPSMLALSGYIQACRALMITAILLGFLGLLLGIAGLRCTNIGGLELSRKAKLAATA
GALHILAGICGMVAISWYAFNITRDFFDPLYPGTKYELGPALYLGWSASLISILGGLCLC
SACCCGSDEDPAASARRPYQAPVSVMPVATSDQEGDSSFGKYGRNAYV

>gi568815591r:101215137_101421709|GENSCAN_predicted_CDS_3|687_bp
atgtcgatggctgtggaaacctttggcttcttcatggcaactgtggggctgctgatgctg
ggggtgactctgccaaacagctactggcgagtgtccactgtgcacgggaacgtcatcacc
accaacaccatcttcgagaacctctggtttagctgtgccaccgactccctgggcgtctac
aactgctgggagttcccgtccatgctggccctctctgggtatattcaggcctgccgggca
ctcatgatcaccgccatcctcctgggcttcctcggcctcttgctaggcatagcgggcctg
cgctgcaccaacattgggggcctggagctctccaggaaagccaagctggcggccaccgca
ggggccctccacattctggccggtatctgcgggatggtggccatctcctggtacgccttc
aacatcacccgggacttcttcgaccccttgtaccccggaaccaagtacgagctgggcccc
gccctctacctggggtggagcgcctcactgatctccatcctgggtggcctctgcctctgc
tccgcctgctgctgcggctctgacgaggacccagccgccagcgcccggcggccctaccag
gctccagtgtccgtgatgcccgtcgccacctcggaccaagaaggcgacagcagctttggc
aaatacggcagaaacgcctacgtgtag

>gi568815591r:101215137_101421709|GENSCAN_predicted_peptide_4|152_aa
MEAVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEE
LLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK
DGLVGMAIVGGMALGVAGLAGLIGLAVSKSKS

>gi568815591r:101215137_101421709|GENSCAN_predicted_CDS_4|459_bp
atggaggccgtgctgaacgagctggtgtctgtggaggacctgctgaagtttgaaaagaaa
tttcagtctgagaaggcagcaggctcggtgtccaagagcacgcagtttgagtacgcctgg
tgcctggtgcggagcaagtacaatgatgacatccgtaaaggcatcgtgctgctcgaggag
ctgctgcccaaagggagcaaggaggaacagcgggattacgtcttctacctggccgtgggg
aactaccggctcaaggaatacgagaaggccttaaagtacgtccgcgggttgctgcagaca
gagccccagaacaaccaggccaaggaactggagcggctcattgacaaggccatgaagaaa
gatggactcgtgggcatggccatcgtgggaggcatggccctgggtgtggcgggactggcc
ggactcatcggacttgctgtgtccaagtccaaatcctga

>gi568815591r:101215137_101421709|GENSCAN_predicted_peptide_5|146_aa
MVRMVPVLLSLLHLLGPAIPQETQDGHYSLTYLYTGLSRPGKGTHRLQGTVFLNGRAFFH
YNSEDRKPEPLGPWRHVEGVEDWEKQSQVQKAREDIFMETLNNIMEYYNDSNASCVICDR
STPRASSSVTSTRPLSSGNHQLMNKG

>gi568815591r:101215137_101421709|GENSCAN_predicted_CDS_5|441_bp
atggtaagaatggtgcctgtcctgctgtctctgctgcaccttctgggtcctgctatcccc
caggagacccaagatggtcattactctctgacctatctctacactgggctgtccaggcct
ggcaaaggcacccacaggctgcagggtactgtcttcctcaatggccgtgccttcttccac
tacaacagtgaagacaggaagcctgagcccctgggaccatggagacacgtggaaggagta
gaggactgggagaagcagagccaagttcagaaggccagggaggacatctttatggagacc
ctgaacaacatcatggagtattacaatgacagtaacgcctcttgtgttatatgtgatcgg
agcacccccagagcttcgtcatccgtgacgagcacccgccctctctccagtgggaatcat
cagctgatgaataagggctga

>gi568815591r:101215137_101421709|GENSCAN_predicted_peptide_6|282_aa
MLKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFENPHVTSNNKGTGCEFE
LWDCGGDAKFESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLI
AHHKPGSGDDKGSLSLSGGGGNRRQGRSCPRGWTLGVAGAAAAAAQGKEARGLHVGSTWA
PATPLGNLSPAAPYSGAGRRRLQLQLLRAGKPVGSTWAPATPLGNLSPAAPYSGGPRGLV
RKLRVHTGVFGEAVPMPETQGHVGNESCFCVIIHVLPRVPQP

>gi568815591r:101215137_101421709|GENSCAN_predicted_CDS_6|849_bp
atgctgaaagccaagatcctcttcgtggggccttgcgagagtggaaaaactgttttggcc
aactttctgacagaatcttctgacatcactgaatacagcccaacccaaggagtgaggatc
ctagaatttgagaacccgcatgttaccagcaacaacaaaggcacgggctgtgaattcgag
ctatgggactgtggtggcgatgctaagtttgagtcctgctggccggccctgatgaaggat
gctcatggagtggtgatcgtcttcaatgctgacatcccaagccaccggaaggaaatggag
atgtggtattcctgctttgtccaacagccgtccttacaggacacacagtgtatgctaatt
gcacaccacaaaccaggctctggagatgataaaggaagcctgtctttgtctggcggcggc
ggtaaccgcaggcaaggcaggagctgccctcggggctggactctcggggtggcaggggct
gcagctgcagctgctcagggcaaggaagcccgtgggctccacgtgggctccacgtgggct
cctgcaacgccgctggggaatctctcgcccgctgccccctattctggagctgggcggcgg
cggctgcagctgcagctgctcagggcagggaagcccgtgggctccacgtgggctcctgca
acgccgctggggaatctctcgcccgctgccccctactctggaggtccacgaggactggtc
cgcaagctccgtgtgcacacaggggtcttcggagaagcagtacccatgcctgaaactcaa
ggacatgtaggaaatgagagttgcttttgtgtcatcatccatgtccttcctcgggtgccc
cagccttga

>gi568815591r:101215137_101421709|GENSCAN_predicted_peptide_7|285_aa
MKLALLLPWACCCLCGSALATGFLYPFSAAALQQHGYPEPGAGSPGSGYASRRMSAAVRP
LEATRPAKHSLESHLGFPSPRSYEAFERRAFAQIVAPAFVRAALAADEMVPTQIEDIYLS
PTQCQMLPQRSKLINTTDVGPALNPNEGWGDAETGVQGPVVSLQAAVTRVRWTAARLHSG
KLQDLVVSKPRFLSACWGLRELPKIPTLKAAPSTWKTQSISGPASPSRQCAGKEPMLPVG
LALRHWCHHTVTRTVSCQVQNGSETVVQRVYQSCRWPGPCANLVS

>gi568815591r:101215137_101421709|GENSCAN_predicted_CDS_7|855_bp
atgaagctggccctgctcctgccctgggcgtgttgctgcctctgcgggtcggcgctggcc
accggcttcctctatcccttctcggccgcagctctgcagcagcacggctaccccgagccc
ggcgccggctcccctggcagcggctacgcgagccgccggatgtctgcggctgtgcggccc
ctggaggcgaccaggcctgccaaacactcactggagtctcacttgggcttccccagcccc
cgtagttacgaagcctttgagagaagggcctttgcacagattgttgcccctgcctttgtc
agagctgcactggcagctgatgagatggtgcccacccagattgaggatatttacttatca
cccactcaatgccagatgctgccgcagagatccaagttgataaataccactgatgtgggc
cctgcgctaaacccgaacgaggggtggggagatgcggagacgggagttcaagggcctgtg
gtctctctgcaggctgcagttacacgggtcaggtggacagcagcacgtctgcacagcgga
aagctgcaggatctggtggtgtcgaagccacgtttcctctctgcctgctgggggttacgt
gaactgccaaaaattcctaccttgaaagctgccccctccacatggaaaactcaatccatc
agtggccccgccagcccttcccgccagtgcgcaggcaaggagccgatgctgcctgtgggg
ctggctctcaggcactggtgccatcacacagtgacacggacggtgtcctgccaggtgcag
aatggctcggagacggtggtccagcgcgtgtaccagagctgccggtggccggggccctgc
gccaacctcgtaagn