GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:23:22

Sequence gi568815591r:75669696_75872176 : 202481 bp : 47.83% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  18655  18770  116  0  2   50   39   131 0.209   2.12
 1.02 Intr +  29993  30050   58  2  1  117   98    90 0.865  11.79
 1.03 Intr +  34197  34355  159  2  0   52   99    56 0.120   3.28
 1.04 Term +  37912  38466  555  0  0  -21   44   232 0.096   2.23
 1.05 PlyA +  39226  39231    6                               1.05

 2.07 PlyA -  39310  39305    6                               1.05
 2.06 Term -  61911  61843   69  0  0   56   46    56 0.113  -3.86
 2.05 Intr -  69294  69106  189  0  0   20   94   174 0.036  10.98
 2.04 Intr -  69858  69621  238  2  1   54   62   100 0.014   1.62
 2.03 Intr -  88554  88474   81  2  0   35  105    59 0.062   1.05
 2.02 Intr - 102308 102194  115  0  1   94   76    78 0.193   6.71
 2.01 Init - 102481 102409   73  1  1   80   75   157 0.890  12.83
 2.00 Prom - 105683 105644   40                              -6.26

 3.00 Prom + 106985 107024   40                              -3.16
 3.01 Init + 109703 109760   58  1  1   42  106    28 0.489   1.47
 3.02 Intr + 113590 113724  135  2  0  101   80    30 0.565   4.04
 3.03 Intr + 117483 117628  146  1  2   70   93    46 0.314   3.30
 3.04 Intr + 123879 124004  126  2  0   50  113    11 0.059   0.68
 3.05 Term + 131595 131738  144  2  0   42   42    85 0.143  -2.79
 3.06 PlyA + 131788 131793    6                               1.05

 4.04 PlyA - 134080 134075    6                               1.05
 4.03 Term - 142269 142101  169  2  1  135   36   194 0.999  16.25
 4.02 Intr - 143728 143611  118  2  1  114   45    50 0.995   2.82
 4.01 Init - 144020 143948   73  2  1   78   94    49 0.927   4.89
 4.00 Prom - 144098 144059   40                              -5.76

 5.03 PlyA - 144501 144496    6                               1.05
 5.02 Term - 150501 150313  189  0  0  -17   42   616 0.991  43.95
 5.01 Init - 153763 153692   72  1  0   90  105     5 0.395   1.48
 5.00 Prom - 154514 154475   40                              -6.56

 6.00 Prom + 157262 157301   40                              -4.66
 6.01 Init + 160132 160236  105  0  0   70   16    67 0.212  -2.06
 6.02 Term + 166017 166238  222  2  0   38   42   373 0.942  24.62
 6.03 PlyA + 167213 167218    6                               1.05

 7.02 PlyA - 168029 168024    6                               1.05
 7.01 Term - 169069 168945  125  2  2   32   44   136 0.440   2.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  69225  69106  120  0  0  103   94   156 0.890  17.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:75669696_75872176|GENSCAN_predicted_peptide_1|295_aa
MRAKEERPGARRVRAPRGVHHAASAGGGGDELSVEPLDGHTLQSFKPLIRVQAYQTLKGS
GTELLARAADPKPLVKSLGKSQGPGPGLHRCAKFPQDSCSMEALPWEPVNLFIWNQKRAR
IAKSILSQKNKAGGITLPDFKLYYKATVTKTVWYWYQNRDIDQWNRTEPSEIMPHIYNYL
IFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLYVRPKTIK
TLEENLGITIQDIGVGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIYLL

>gi568815591r:75669696_75872176|GENSCAN_predicted_CDS_1|888_bp
atgagagccaaggaagaacggccgggggcgcgccgggtccgggctcccaggggagtccat
catgctgcgtctgcagggggtgggggggatgagctgtcggtggagcccctcgacggccac
accctccagtccttcaagcccctgatccgggtccaggcctaccagaccctgaaggggtct
ggaactgagctcctggccagagctgccgacccgaagcctttggtgaagagtctagggaaa
agccagggccccgggcctgggctgcataggtgtgccaagttcccccaagactcatgcagc
atggaagccctgccctgggaaccagtgaacctgttcatatggaaccaaaaaagagcccgc
atcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttc
aaactatactacaaggctacagtaaccaaaacagtatggtactggtaccaaaacagagat
atagatcaatggaacagaacagagccctcagaaataatgccgcatatctacaactatctg
atctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatgg
tgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacacct
tatacaaaaatcaattcaagatggattaaagatttatacgttagacctaaaaccataaaa
accctagaagaaaacctaggcattaccattcaggacataggcgtgggcaaggacttcatg
tccaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaa
ctaaagagcttctgcacagcaaaagaaactaccatatatcttctttag

>gi568815591r:75669696_75872176|GENSCAN_predicted_peptide_2|254_aa
MMGLSLASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQR
AVMPGVPNPWAMDQYWSICGLLGTGPHSRRAGQSGAPGSQARKELTGYSQAGWDSPGGGP
TARPASSPPISTGRRGIAPCRSGQGSGRRLAEGSTLGARGDCGRGEERAGGAGGAVGIPG
QPRAPDSAPRGDMDRMASSMKQVPNPLPKVLSRRGVGAGLEAAERESFERTQVHKEVTPC
LKSEQVPSCKESCS

>gi568815591r:75669696_75872176|GENSCAN_predicted_CDS_2|765_bp
atgatgggcctctccttggcctctgctgtgctcctggcctccctcctgagtctccacctt
ggaactgccacacgtgggagtgacatatccaagacctgctgcttccaatacagccacaag
ccccttccctggacctgggtgcgaagctatgaattcaccagtaacagctgctcccagcgg
gctgtgatgccaggggtccccaacccctgggccatggaccagtactggtccatctgtggc
ctgttaggaactgggcctcacagcaggagggctggtcagtccggcgctcccgggtcccag
gcccggaaggagctaacgggctattcgcaggcgggctgggattcccccgggggaggcccc
actgcccggcccgcgtcatccccgcccatctccacgggccgtcgcgggatagccccctgc
aggagcgggcagggtagtgggcggcgcttggcggagggcagcacgctcggggcgcgcggg
gactgcggccgaggggaggagagggcgggcggggcgggcggcgccgtggggatcccgggg
cagccgagggcccctgactcggctcctcgcggcgacatggatcggatggccagctccatg
aagcaggtgcccaacccactgcccaaggtgctgagccggcgcggggtcggcgctgggctg
gaggcggcggagcgcgagagcttcgagcggactcaggtgcacaaagaagtcaccccttgc
ctgaagtctgagcaggtgccttcttgcaaggagagctgctcgtga

>gi568815591r:75669696_75872176|GENSCAN_predicted_peptide_3|202_aa
MTSGPQTDQPKEHLTNFKLDEQERVFSLAQSHTDNRRLHEPDLQEVIRAVPLGDPKWNYQ
ADSPDVIPRFGLPTSIQSDNGLAFISQITQAVSQALGIQWKLRTPYHPQSSGKCWDYRHK
SLHPAKCLLNSYSPSNVQGSGDTVVDRTPSLSLRKSSLWYKAPQSRDGDTIGDGKTSGAH
QLGQPNKKRHGYHIISFPDFLS

>gi568815591r:75669696_75872176|GENSCAN_predicted_CDS_3|609_bp
atgacctcaggtcctcagaccgaccagcccaaggaacatctcaccaattttaaattggat
gaacaggaaagagttttttctctagcccaatctcacactgataaccgccggcttcacgag
ccagacctccaggaagttattagagcagttcccctaggagatccaaaatggaactatcag
gctgattccccagacgtaattcctcggtttggccttcccacctctatacagtccgataat
ggactggcctttattagtcaaatcacccaagcagtttctcaggctcttggtattcagtgg
aaacttcgtaccccttaccatcctcaatcttcaggaaagtgctgggattacaggcataag
tcactgcatccagccaaatgtttgctgaattcttacagccccagcaatgtccaaggctct
ggagacaccgtggtggacaggacaccatccctgtccttaagaaagagtagcctttggtat
aaggcaccccagtccagagatggagatactattggcgatgggaaaacatcaggagcacac
caactggggcagcccaataaaaagaggcatggatatcacatcatcagcttccctgacttt
ttatcataa

>gi568815591r:75669696_75872176|GENSCAN_predicted_peptide_4|119_aa
MAGLMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLK
AGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQKKASPRARAVAVKGPVQRYPGNQTTC

>gi568815591r:75669696_75872176|GENSCAN_predicted_CDS_4|360_bp
atggcaggcctgatgaccatagtaaccagccttctgttccttggtgtctgtgcccaccac
atcatccctacgggctctgtggtcatcccctctccctgctgcatgttctttgtttccaag
agaattcctgagaaccgagtggtcagctaccagctgtccagcaggagcacatgcctcaag
gcaggagtgatcttcaccaccaagaagggccagcagttctgtggcgaccccaagcaggag
tgggtccagaggtacatgaagaacctggacgccaagcagaagaaggcttcccctagggcc
agggcagtggctgtcaagggccctgtccagagatatcctggcaaccaaaccacctgctaa

>gi568815591r:75669696_75872176|GENSCAN_predicted_peptide_5|86_aa
MQGRRPSLPRCPSSRPILPAIPDLKEKEKEKEKEKEKEKEEEEEEEKKKKKKKKEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEVVY

>gi568815591r:75669696_75872176|GENSCAN_predicted_CDS_5|261_bp
atgcaggggaggcgcccttccctccccaggtgcccctcctctcgtcccattcttcctgcc
atcccagatctgaaggagaaggagaaggagaaggagaaggagaaggagaaggagaaggag
gaggaggaggaggaggagaagaagaagaagaagaagaagaaggaagaagaagaagaagag
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagtagtttactaa

>gi568815591r:75669696_75872176|GENSCAN_predicted_peptide_6|108_aa
MNSEMTAMPQPPNPPGNQLLFISSGHKGSLWTSWIVLKYQTLIFGNSAEFGTLKKAAVHY
DGSGRSLGSADMRFERKAHALKAMKQYYGTPLAGRPVNIQLVTSQIDT

>gi568815591r:75669696_75872176|GENSCAN_predicted_CDS_6|327_bp
atgaacagtgaaatgacggcgatgccccagccacccaacccccctgggaatcagcttctg
ttcatcagctcaggccacaaaggaagtctttggacaagctggatagttttgaagtatcag
acactgatatttgggaactctgcagaatttggaacgctgaagaaggcggctgtgcactac
gatggctctggccgcagcttaggatcagcagacatgcgctttgagcggaaggcacacgcc
ctgaaggccatgaagcagtactacggcacccctctggctggccgccctgtgaacattcag
cttgtcacatcacagattgatacataa

>gi568815591r:75669696_75872176|GENSCAN_predicted_peptide_7|41_aa
XELLFHGTGPFYIATNNVEYLQIGPLSDIHGKSIHRYTRLQ

>gi568815591r:75669696_75872176|GENSCAN_predicted_CDS_7|126_bp
naggaactgcttttccacggtactggaccattttacatcgccaccaacaatgtagagtac
ctgcagataggtcctttgtctgatattcacggcaagtcaatacacagatacaccaggttg
cagtag