GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:23:55

Sequence gi568815591f:74115976_74324739 : 208764 bp : 49.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4531   4663  133  1  1   47   92   127 0.583   9.65
 1.02 Intr +   4917   5074  158  2  2   63  105   271 0.999  25.11
 1.03 Term +   5164   5326  163  1  1   83   52   169 0.994  10.21
 1.04 PlyA +   6522   6527    6                               1.05

 2.00 Prom +  49432  49471   40                              -0.36
 2.01 Init +  58409  58467   59  1  2   56   72   209 0.663  16.88
 2.02 Intr +  71636  71823  188  2  2  116  113   117 0.994  16.33
 2.03 Intr +  72344  72430   87  0  0   55   75   100 0.906   5.34
 2.04 Intr +  78766  78903  138  2  0   96  102    59 0.981   8.54
 2.05 Term +  79194  79333  140  1  2  115   52    74 0.987   4.63
 2.06 PlyA +  81098  81103    6                               1.05

 3.03 PlyA -  81140  81135    6                               1.05
 3.02 Term -  87503  87409   95  0  2   62   54   106 0.643   2.59
 3.01 Init -  90599  90551   49  2  1   66  111    -5 0.249   0.79
 3.00 Prom -  96619  96580   40                              -1.56

 4.00 Prom +  98751  98790   40                              -7.76
 4.01 Init + 100001 100094   94  1  1  104  115   110 0.960  13.84
 4.02 Intr + 100850 100889   40  0  1  114   65    26 0.697   0.18
 4.03 Intr + 104242 104279   38  1  2  151   96    14 0.746   6.41
 4.04 Intr + 104729 104759   31  0  1  114   84     0 0.654  -0.61
 4.05 Intr + 105662 105717   56  2  2   70  100    66 0.662   4.62
 4.06 Intr + 107749 107808   60  2  0  127   94   104 0.999  13.61
 4.07 Intr + 108043 108222  180  2  0  111   69    36 0.931   3.84
 4.08 Term + 108664 108767  104  2  2  116   49    84 0.940   5.74
 4.09 PlyA + 109415 109420    6                               1.05

 5.12 PlyA - 111245 111240    6                               1.05
 5.11 Term - 116241 116114  128  1  2   88   42    52 0.731  -0.96
 5.10 Intr - 119670 119553  118  0  1   77   89   126 0.948  11.64
 5.09 Intr - 121467 121387   81  0  0  112   58   120 0.996  11.23
 5.08 Intr - 123013 122948   66  1  0   77   82   100 0.936   7.40
 5.07 Intr - 124120 123963  158  2  2   84   91   251 0.947  24.73
 5.06 Intr - 127271 127171  101  1  2   89  109   109 0.931  12.85
 5.05 Intr - 130788 130687  102  2  0   58   80    88 0.941   4.29
 5.04 Intr - 133143 133037  107  0  2   32   96    92 0.992   3.41
 5.03 Intr - 133805 133764   42  2  0   79  101    44 0.901   3.24
 5.02 Intr - 136523 136454   70  1  1   78  105    48 0.969   4.68
 5.01 Init - 138408 138296  113  0  2   84   65   146 0.923  11.61
 5.00 Prom - 142220 142181   40                              -1.96

 6.06 PlyA - 142918 142913    6                               1.05
 6.05 Term - 163866 163670  197  1  2   61   43    91 0.086  -0.53
 6.04 Intr - 171007 170959   49  1  1   41  105    61 0.127   1.35
 6.03 Intr - 173246 173087  160  1  1  132  100    66 0.549  12.19
 6.02 Intr - 181192 181021  172  2  1   46   32   143 0.060   3.50
 6.01 Init - 185119 185071   49  1  1   55   91    53 0.861   3.41
 6.00 Prom - 185236 185197   40                              -6.06

 7.05 PlyA - 186228 186223    6                               1.05
 7.04 Term - 187109 186692  418  1  1   84   53   171 0.503   7.95
 7.03 Intr - 196877 196551  327  1  0   69  113    99 0.400   5.31
 7.02 Intr - 201791 201554  238  0  1   46   43   129 0.001   0.87
 7.01 Init - 206461 206413   49  1  1   86   58    73 0.027   3.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  73698  73762   65  1  2   85   92    92 0.972   7.74
S.002 Intr +  73847  73943   97  1  1   54   45   122 0.920   4.08
S.003 Term + 201505 201681  177  0  0  151   36   139 0.815  12.69


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:74115976_74324739|GENSCAN_predicted_peptide_1|151_aa
XWPGPLPFGIPGTPMCSSADSRSLYPGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT
MDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLP
LGPQLEQLDRGFWETYRRGESGLPAHPEVPD

>gi568815591f:74115976_74324739|GENSCAN_predicted_CDS_1|456_bp
nnctggcctggtcccctgccttttggcatccctggcacccccatgtgttcatctgctgac
agtcggtctctttatccaggccgcagctatgatgagaaggtggatgtgttctcctttggg
atcgtcctgtgcgagatcatcgggcgggtgaacgcagaccctgactacctgccccgcacc
atggactttggcctcaacgtgcgaggattcctggaccgctactgccccccaaactgcccc
ccgagcttcttccccatcaccgtgcgctgttgcgatctggaccccgagaagaggccatcc
tttgtgaagctggaacactggctggagaccctccgcatgcacctggccggccacctgcca
ctgggcccacagctggagcagctggacagaggtttctgggagacctaccggcgcggcgag
agcggactgcctgcccaccctgaggtccccgactga

>gi568815591f:74115976_74324739|GENSCAN_predicted_peptide_2|203_aa
MADFDTYDDRAYSSFGGGRGSRGSAGGHGSRSQKELPTEPPYTAYVGNLPFNTVQGDIDA
IFKDLSIRSVRLVRDKDTDKFKGCGSKEQEEEGIRAAFSCLQGFLKEVCLLCFRDDFLGG
RGGSRPGDRRTGPPMGSRFRDGPPLRGSNMDFREPTEEERAQRPRLQLKPRTVATPLNQV
ANPNSAIFGGARPREEVVQKEQE

>gi568815591f:74115976_74324739|GENSCAN_predicted_CDS_2|612_bp
atggcggacttcgacacctacgacgatcgggcctacagcagcttcggcggcggcagaggg
tcccgcggcagtgctggtggccatggttcccgtagccagaaggagttgcccacagagccc
ccctacacagcatacgtaggaaatctacctttcaatacggttcagggcgacatagatgct
atctttaaggatctcagcataaggagtgtacggctagtcagagacaaagacacagataaa
tttaaagggtgcgggagcaaagagcaggaagaagaagggatccgagcagcattctcctgc
ctgcagggcttcctgaaggaagtgtgcctgctgtgcttcagggatgacttcttagggggc
aggggaggtagtcgcccaggcgaccggcgaacaggcccccccatgggcagccgcttcaga
gatggccctcccctccgtggatccaacatggatttcagagaacccacagaagaggaaaga
gcacagagaccacgactccagcttaaacctcgaacagtcgcgacgcccctcaatcaagta
gccaatcccaactctgctatcttcgggggtgccaggcctagagaggaagtcgttcaaaag
gagcaagaatga

>gi568815591f:74115976_74324739|GENSCAN_predicted_peptide_3|47_aa
MPSALDSGPRFLPTVTEQNCSCHRKQKPNACGHQQNYRREEKLFNSC

>gi568815591f:74115976_74324739|GENSCAN_predicted_CDS_3|144_bp
atgccaagtgcactggattcaggaccacgtttccttcccacggtaaccgagcagaactgc
tcctgccacagaaaacagaagcccaatgcttgcggccatcagcagaattatcggagagag
gaaaaacttttcaacagctgctga

>gi568815591f:74115976_74324739|GENSCAN_predicted_peptide_4|200_aa
MSSGTELLWPGAALLVLLGVAASLCVRCSRPGAKRSEKIYQQRSLKDKLLQFYPSLEGSR
HGSEEAYIDPIAMEYYNWGRFSKPPEDDDANSYENVLICKQKTTETGAQQEGIGGLCRGD
LSLSLALKTGPTSGLCPSASPEEDEESEDYQNSASIHQWRESRKVMGQLQREASPGPVGS
PDEEDGEPDYVNGEVAATEA

>gi568815591f:74115976_74324739|GENSCAN_predicted_CDS_4|603_bp
atgagctcggggactgaactgctgtggcccggagcagcgctgctggtgctgttgggggtg
gcagccagtctgtgtgtgcgctgctcacgcccaggtgcaaagaggtcagagaaaatctac
cagcagagaagtctgaaggacaagctgttgcaattctaccccagcctggagggaagcaga
cacgggtcggaggaagcctacatagaccccattgccatggagtattacaactgggggcgg
ttctcgaagcccccagaagatgatgatgccaattcctacgagaatgtgctcatttgcaag
cagaaaaccacagagacaggtgcccagcaggagggcataggtggcctctgcagaggggac
ctcagcctgtcactggccctgaagactggccccacttctggtctctgtccctctgcctcc
ccggaagaagatgaggaatctgaggattatcagaactcagcatccatccatcagtggcgc
gagtccaggaaggtcatggggcaactccagagagaagcatcccctggcccggtgggaagc
ccagacgaggaggacggggaaccggattacgtgaatggggaggtggcagccacagaagcc
tag

>gi568815591f:74115976_74324739|GENSCAN_predicted_peptide_5|361_aa
MEVEAVCGGAGEVEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRL
EVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKI
KMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEP
IQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTF
SGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIF
RVCKTFQMAEYLKLEFIKVGNWIHSHENSGRSELSFADGRPPGKAVSEDNGPGGQLEQRL
H

>gi568815591f:74115976_74324739|GENSCAN_predicted_CDS_5|1086_bp
atggaggtggaggccgtctgtggtggcgcgggcgaggtggaggcccaggactctgaccct
gcccctgccttcagcaaggcccccggcagcgccggccactacgaactgccgtgggttgaa
aaatataggccagtaaagctgaatgaaattgtcgggaatgaagacaccgtgagcaggcta
gaggtctttgcaagggaaggaaatgtgcccaacatcatcattgcgggccctccaggaacc
ggcaagaccacaagcattctgtgcttggcccgggccctgctgggcccagcactcaaagat
gccatgttggaactcaatgcttcaaatgacaggggcattgacgttgtgaggaataaaatt
aaaatgtttgctcaacaaaaagtcactcttcccaaaggccgacataagatcatcattctg
gatgaagcagacagcatgaccgacggagcccagcaagccttgaggagaaccatggaaatc
tactctaaaaccactcgcttcgcccttgcttgtaatgcttcggataagatcatcgagccc
attcagtcccgctgtgcagtcctccggtacacaaagctgaccgacgcccagatcctcacc
aggctgatgaatgttatcgagaaggagagggtaccctacactgatgacggcctagaagcc
atcatcttcacggcccagggagacatgaggcaggcgctgaacaacctgcagtccaccttc
tcaggatttggcttcattaacagtgagaacgtgttcaaggtctgtgacgagccccaccca
ctgctggtaaaggagatgatccagcactgtgtgaatgccaacattgacgaagcctacaag
attcttgctcacttgtggcatctgggctactcaccagaagatatcattggcaacatcttt
cgagtgtgtaaaactttccaaatggcagaatacctgaaactggagtttatcaaggtcgga
aattggatacactcacatgaaaatagcggaaggagtgaactctcttttgcagatggcagg
cctcctggcaaggctgtgtcagaagacaatggccccggtggccagttagagcagagactt
cactga

>gi568815591f:74115976_74324739|GENSCAN_predicted_peptide_6|208_aa
MHVGEDVEERERVYTVAALRGSLELTPGFRSCTDASLPLHPRPKLTEDTDSKEKAASQEP
RYLCQKGDPLLISKPQLSFVGRPGFAHIHLRAGHLVVLTSRLVKRILQPCYACKDVSGHW
EGRQLGKYYSEQQPAVNRPYLAAAQADSCTRNFHGTVSHLQTSSVTIRVGGQQIWGLGSA
AFPNAASCDSILPLWQSNESVEDLQTRS

>gi568815591f:74115976_74324739|GENSCAN_predicted_CDS_6|627_bp
atgcatgttggagaggatgtggaggaaagggaacgcgtatacactgttgctgcccttaga
ggctctcttgagcttacaccaggattccgcagctgtacagatgcatctcttcccctgcac
cccaggcccaagctgactgaggacacagactccaaggagaaagcagcaagccaggagccc
agatacctgtgtcagaaaggcgacccactgctgatcagcaagccgcagctgtcctttgtg
gggcgtccagggttcgcccacatccacctccgcgctgggcacctggtggtgcttacatcg
cgtttggtgaaacgcatcctccagccatgctatgcttgcaaagatgtctctggtcattgg
gaaggacggcagcttgggaagtattattcagagcaacagcctgcggtcaacagaccttac
ctggccgctgctcaagctgactcatgcaccaggaatttccacgggactgtgtcacacttg
caaacgtcatctgtgactatccgggtgggaggacagcagatctggggactgggctctgca
gccttcccaaatgcagcttcctgtgattccattcttccactttggcagtcgaatgagtca
gtggaagatttgcaaacacggagctaa

>gi568815591f:74115976_74324739|GENSCAN_predicted_peptide_7|343_aa
MGFRHVAQAGLELLTSDWSQSGLCSWGSSRRTLIPCSQSPHPPSLVCHVPSLELAATAAE
DEADPVDVRPMGLECFPPRPGGFRPLGFCMAVPLGRLAVLRAEENKLPPGTQQWSRHAGV
RPREHWACLPALALRAAKSNIPTPLVPREFWGPGVNHAGVQGCSLRPQNLALLVACSMRE
PDCELWAQLSESLVRLGQHFQCQQRPGRADGRVPGCLYCCLHPYLVSLLCQACGELQPQL
CRQHTQLLASSRGTREPQEEWGGDKSRAALRAPIGLAAIQIVGTADSQRGDRALPQHHSR
SRAGTQAPQAHVASNRREGDETGKTTVDSVDQVYTVQGSGLLG

>gi568815591f:74115976_74324739|GENSCAN_predicted_CDS_7|1032_bp
atggggtttcgccatgttgcccaggctggtctcgaactcctgacctcagattggtcacag
agtggcctgtgctcctggggctcttccagaagaacactcatcccatgtagccagtcccct
caccccccatccttggtgtgccacgtaccttccttggagctagcggccaccgccgccgag
gatgaagctgacccagtagatgtccggcccatggggctggagtgcttccccccacggccg
gggggcttcaggccgctgggcttctgcatggcggtgccactgggcagactggcagtttta
agagcagaggaaaacaagctgcccccaggcacacagcagtggagccgacatgccggggtg
cgcccacgagagcactgggcatgcctgccagccctggccctcagggctgctaaatccaac
attccaacgcccctggtgccccgggaattctgggggccgggagtcaatcatgctggggta
caaggctgctcccttcgtcctcagaacctggccctcctggtggcttgttcaatgagggag
ccggactgtgagctttgggcacagctctccgagagcttggttaggctgggtcagcatttc
caatgccagcaaaggcctgggagagctgatgggagggtgcccggctgtctgtactgctgt
ctccacccatacttggtcagtcttctctgccaggcctgcggggagctgcagccccagctg
tgcaggcaacacacacagctgctggccagcagtagaggtacgagggagccccaggaagaa
tggggtggggataaatcccgagctgccctgagagcacccattggcctggcggccatccag
atagtggggacagctgacagccagcgtggggatagggccttgccccagcatcacagcaga
tccagggctggaacccaggctccacaagcccacgtggcttcaaacaggagggagggagat
gaaactggcaagaccacagtggatagtgtggaccaggtttacacagtgcagggctctggg
ctcctgggctga