GENSCAN 1.0	Date run:  8-Nov-116	Time: 07:38:40

Sequence gi568815591r:66888374_67095417 : 207044 bp : 44.48% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1068   1148   81  2  0   60   87    70 0.467   5.07
 1.02 Term +  14410  14628  219  0  0  109   41    78 0.117   2.24
 1.03 PlyA +  17895  17900    6                               1.05

 2.04 PlyA -  17945  17940    6                              -0.45
 2.03 Term -  18194  18098   97  1  1   71   44    61 0.295  -2.56
 2.02 Intr -  20461  20220  242  1  2  114   69    98 0.882   6.85
 2.01 Init -  20670  20533  138  0  0   87  108    56 0.707   7.66
 2.00 Prom -  21743  21704   40                              -6.56

 3.00 Prom +  22469  22508   40                              -5.46
 3.01 Init +  26208  26453  246  2  0   86   12   385 0.055  28.30
 3.02 Intr +  53475  53651  177  2  0   95   65   291 0.923  27.62
 3.03 Intr +  56603  56888  286  1  1   79   85   183 0.992  14.01
 3.04 Intr +  60171  60321  151  1  1   71   75   143 0.848  10.52
 3.05 Intr +  62579  62762  184  2  1  109   95   181 0.986  20.69
 3.06 Intr +  64853  64996  144  1  0  103  105    27 0.975   6.38
 3.07 Term +  67129  67149   21  0  0  124   31    16 0.597  -2.19
 3.08 PlyA +  67755  67760    6                               1.05

 4.06 PlyA -  68160  68155    6                               1.05
 4.05 Term -  69808  69719   90  1  0   52   51    73 0.697  -2.28
 4.04 Intr -  70218  70066  153  0  0   95   52   133 0.796  10.67
 4.03 Intr -  82320  82282   39  0  0   81   80    33 0.026   0.22
 4.02 Intr -  82704  82669   36  0  0   95   87    11 0.040   0.16
 4.01 Init -  86325  86245   81  0  0   76   77    30 0.233   1.67
 4.00 Prom -  86963  86924   40                              -0.76

 5.08 PlyA -  88221  88216    6                               1.05
 5.07 Term - 100126  99998  129  1  0   79   47   187 0.999  11.88
 5.06 Intr - 102928 102764  165  1  0   17   60   192 0.992   9.46
 5.05 Intr - 105044 104844  201  2  0   51  109   200 0.999  17.88
 5.04 Intr - 105968 105839  130  1  1   32   94   107 0.948   6.40
 5.03 Intr - 107049 106917  133  1  1   34   67   244 0.932  16.60
 5.02 Intr - 108596 108380  217  2  1   96   78   196 0.696  17.48
 5.01 Init - 109736 109725   12  2  0   49  100    -8 0.418  -3.42
 5.00 Prom - 110104 110065   40                              -3.76

 6.00 Prom + 114070 114109   40                              -6.36
 6.01 Init + 118357 118368   12  0  0  114   68     3 0.494   1.27
 6.02 Intr + 121210 121311  102  0  0   75   73   117 0.996   9.27
 6.03 Intr + 125994 126188  195  2  0   60  100   182 0.999  16.21
 6.04 Intr + 129480 129770  291  2  0  105   59   247 0.974  20.83
 6.05 Intr + 136527 136649  123  2  0   64   81   176 0.976  15.28
 6.06 Term + 136831 136860   30  0  0   73   47    22 0.636  -5.55
 6.07 PlyA + 137012 137017    6                               1.05

 7.06 PlyA - 137111 137106    6                               1.05
 7.05 Term - 143928 143890   39  0  0  125   42    22 0.404  -1.51
 7.04 Intr - 162097 162050   48  1  0  129  116   -24 0.865   3.38
 7.03 Intr - 163533 163390  144  0  0   38  115   131 0.978  11.28
 7.02 Intr - 187940 187710  231  2  0   78   93    76 0.475   5.07
 7.01 Init - 193242 193186   57  0  0   71   75    19 0.413   0.21
 7.00 Prom - 199188 199149   40                              -1.76

 8.02 PlyA - 199478 199473    6                               1.05
 8.01 Term - 201064 200884  181  0  1   60   55   135 0.479   4.48

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  26208  26570  363  2  0   86   37   364 0.941  27.18
S.002 Term -  33467  33196  272  0  2    6   48   146 0.926  -1.95
S.003 Init -  33580  33496   85  1  1   77   83    67 0.879   6.08


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:66888374_67095417|GENSCAN_predicted_peptide_1|99_aa
MRARDTAVPHGDSQLVFGSSLWKGCTLVRLLRPDGLFRPGSSLTMASFKGPAFPSWRPLQ
AQIGKPPLSWWLSPGLLSRPSTLSRLYLQAQPLPADSRF

>gi568815591r:66888374_67095417|GENSCAN_predicted_CDS_1|300_bp
atgagagccagagatacagcggtgccccatggagacagccagctggtgtttggtagttcc
ttgtggaaaggctgtactttggtccggctcctgcgtcctgacggcctctttaggcccggc
tcgtccctcacaatggcctctttcaaaggcccagcttttccttcgtggcggcctctccag
gcccaaattggcaagcctcccctgtcctggtggctgtctcccggcctactctccaggccc
agcacactctcgcggctgtacctccaggcccagcccctgcctgcagacagccgcttttga

>gi568815591r:66888374_67095417|GENSCAN_predicted_peptide_2|158_aa
MRPELPVMNWCFLTHLAIKWVVHSSIPSSDGGGIYVIGLQLVLKAQPEMMASWGVPYDQL
TEEEKTRGWFTGGSARYAGTTQKWTAAALQPLSGTSLMDSSEEKSFQWTELQAVHLVVHF
AWKEMARTSDSKFFRFGTQNGFLAPQLADSLLWNLVIL

>gi568815591r:66888374_67095417|GENSCAN_predicted_CDS_2|477_bp
atgagacctgaactacctgtcatgaactggtgttttctgacccacctagccataaagtgg
gtcgtgcacagcagcattccatcatcagatggaggtggtatatatgtgatcgggctccag
ctggtcctgaaggcacaacctgaaatgatggcctcatggggagttccctatgatcagttg
acagaggaagagaagactaggggctggttcacaggtggttctgcacgatatgcaggcacc
acccaaaaatggacagctgcagcactacagcccctttctgggacatcccttatggacagc
agtgaagaaaaatctttccagtggacagaacttcaagcagtgcacctggttgtgcacttt
gcatggaaggaaatggccagaacatcggactccaagttcttcaggtttgggactcagaat
ggcttccttgctcctcagcttgcagacagcctattgtggaaccttgtgatcctgtga

>gi568815591r:66888374_67095417|GENSCAN_predicted_peptide_3|402_aa
MAPAKKGGEKKKGHSAINEVVTREYTINIHKRIHEVGFKKRAPRALKEIQKYAMKEMGTL
DMHIDTRLNKAVWAKGISHTMSVELIRIMFSINPLENLKVYISSRPPLVVFMISVSAMAI
AFLTLGYFFKIKEIKSPEMAEDWNTFLLRFNDLDLCVSENETLKHLTNDTTTPESTMTSG
QARASTQSPQALEDSGPVNISVSITLTLDPLKPFGGYSRNVTHLYSTILGHQIGLSGREA
HEEINITFTLPTAWSSDDCALHGHCEQVVFTACMTLTASPGVFPVTVQPPHCVPDTYSNA
TLWYKIFTTARDANTKYAQDYNPFWCYKGAIGKVYHALNPKLTVIVPDDDRSLINLHLMH
TSYFLFVMVITMFCYAVIKGRPSKLRQSNPEFCPEKVALAEA

>gi568815591r:66888374_67095417|GENSCAN_predicted_CDS_3|1209_bp
atggctcccgcaaagaagggtggtgagaagaaaaagggccattctgccatcaacgaggtg
gtgacccgagaatacaccatcaacattcacaagcgcatccatgaagtgggcttcaagaag
cgtgcccctcgggcactcaaagaaattcagaaatatgccatgaaggagatgggaactcta
gacatgcacattgataccaggctcaacaaagctgtctgggccaaaggaatatcccatacc
atgtctgtggagctgatcagaataatgttcagcatcaaccccctggagaacctgaaggtg
tacatcagcagtcggcctcccctggtggtcttcatgatcagcgtaagcgccatggccata
gctttcctgaccctgggctacttcttcaaaatcaaggagattaaatccccagaaatggca
gaggattggaatacttttctgctacggttcaatgatttggacttgtgtgtatcagagaat
gaaaccctcaagcatctcacaaacgacaccacaactccggaaagtacaatgaccagcggg
caggcccgagcttccacccagtccccccaggccctggaggactcgggcccggtgaatatc
tcagtctcaatcaccctaaccctggacccactgaaacccttcggagggtattcccgcaac
gtcacccatctgtactcaaccatcttagggcatcagattggactttcaggcagggaagcc
cacgaggagataaacatcaccttcaccctgcctacagcgtggagctcagatgactgcgcc
ctccacggtcactgtgagcaggtggtattcacagcctgcatgaccctcacggccagccct
ggggtgttccccgtcactgtacagccaccgcactgtgttcctgacacgtacagcaacgcc
acgctctggtacaagatcttcacaactgccagagatgccaacacaaaatacgcccaagat
tacaatcctttctggtgttataagggggccattggaaaagtctatcatgctttaaatccc
aagcttacagtgattgttccagatgatgaccgttcattaataaatttgcatctcatgcac
accagttacttcctctttgtgatggtgataacaatgttttgctatgctgttatcaagggc
agacctagcaaattgcgtcagagcaatcctgaattttgtcccgagaaggtggctttggct
gaagcctaa

>gi568815591r:66888374_67095417|GENSCAN_predicted_peptide_4|132_aa
MPRDQTYVRLQPSKICRRFSQTLVVLLPCRRASSPSAMIVLALPMGARNCSWKTPIRLEE
EDAEQINSDVLFCKAHMHILQTRKINLEVNAITDQLLTIMQQESEMPEGELVLLHGAALN
SKRTPSVAHFES

>gi568815591r:66888374_67095417|GENSCAN_predicted_CDS_4|399_bp
atgccgagagatcaaacgtacgtaagacttcagcccagcaagatctgccgcagattttct
caaaccctggtggtccttttgccatgcagacgtgcctcttcgccttctgccatgattgta
ctggcattaccaatgggggctcgaaactgcagctggaaaacacccatccggctggaggaa
gaagacgcggagcaaataaattcagatgttttattctgtaaagcacatatgcacatactt
caaacacggaaaattaatctggaagtgaatgccataacagatcagctactgaccatcatg
cagcaagagtccgagatgcctgagggtgagctggtgctcctgcacggggccgccctgaac
agcaagcgcactccgtctgttgcacacttcgaatcctga

>gi568815591r:66888374_67095417|GENSCAN_predicted_peptide_5|328_aa
MILKSRQETRISDLDSPMIRTGTARRTELPRRVSGVPSACRPVGSHDTARPVLIGSEDEE
VGPEESPELRERKPVPAAMSIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSG
VEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHT
QLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLK
EKMKIERAHMRLRFILPVNEGKKLKEKLKPLIKVIESEDYGQQLEIVCLIDPGCFREIDE
LIKKETKGKGSLEVLNLKDVEEGDEKFE

>gi568815591r:66888374_67095417|GENSCAN_predicted_CDS_5|987_bp
atgatattaaagagccgacaggagactaggatctcggacctggatagcccgatgattcgc
actggtaccgcgagacgcaccgagctacctcgccgcgttagcggcgtaccgagtgcctgc
agacctgtgggcagccatgacactgccaggccggtcctgattggttcagaggacgaagag
gtgggcccagaggaaagcccagagctccgggaaaggaagccagtgcccgccgcgatgtcg
atcttcacccccaccaaccagatccgcctaaccaatgtggccgtggtacggatgaagcgt
gccgggaagcgcttcgaaatcgcctgctacaaaaacaaggtcgtcggctggcggagcggc
gtggaaaaagacctcgatgaagttctgcagacccactcagtgtttgtaaatgtttctaaa
ggtcaggttgccaaaaaggaagatctcatcagtgcgtttggaacagatgaccaaactgaa
atctgtaagcagattttgactaaaggagaagttcaagtatcagataaagaaagacacaca
caactggagcagatgtttagggacattgcaactattgtggcagacaaatgtgtgaatcct
gaaacaaagagaccatacaccgtgatccttattgagagagccatgaaggacatccactat
tcggtgaaaaccaacaagagtacaaaacagcaggctttggaagtgataaagcagttaaaa
gagaaaatgaagatagaacgtgctcacatgaggcttcggttcatccttccagtcaatgaa
ggcaagaagctgaaagaaaagctcaagccactgatcaaggtcatagaaagtgaagattat
ggccaacagttagaaatcgtatgtctgattgacccgggctgcttccgagaaattgatgag
ctaataaaaaaggaaactaaaggcaaaggttctttggaagtactcaatctgaaagatgta
gaagaaggagatgagaaatttgaatga

>gi568815591r:66888374_67095417|GENSCAN_predicted_peptide_6|250_aa
MPGQGFATVLAEAVTSLDLPVAIINLKEYDPDDHLIEEVTSKNVCVFLVATYTDGLPTES
AEWFCKWLEEASIDFRFGKTYLKGMRYAVFGLGNSAYASHFNKVGKNVDKWLWMLGAHRV
MSRGEGDCDVVKSKHGSIEADFRAWKTKFISQLQALQKGERKKSCGGHCKKGKCESHQHG
SEEREEGSHEQDELHHRDTEEEEPFESSSEEEFGGEDHQSLNSIVDVEDLGKIMDHVKKE
KACESQLIRG

>gi568815591r:66888374_67095417|GENSCAN_predicted_CDS_6|753_bp
atgcccggccagggattcgcaacagttcttgctgaagcagttacatccctggatctgcct
gtggccattattaatctaaaagaatatgatccagatgatcatctgatagaagaggtgact
agtaaaaatgtctgtgtcttcctggttgcgacatacactgacggcctaccaactgaaagt
gcagagtggttctgcaaatggttagaggaagcatccattgattttcgatttggcaaaact
tacctgaagggtatgagatatgcggtatttggcctgggaaattctgcctatgctagccac
ttcaacaaggttggcaaaaatgttgacaagtggctctggatgcttggcgcgcatcgtgtg
atgagtcgaggggagggcgactgcgacgtggttaaaagcaagcacggcagcattgaggcc
gacttcagagcatggaagaccaagttcatctcccagctgcaggcacttcagaaaggggag
agaaagaagtcctgtggcggccactgcaagaaaggcaaatgtgaatctcaccaacatggc
tcagaggagagggaggaaggatctcatgagcaggatgaattgcatcatagagacaccgag
gaggaagaaccctttgagagctccagtgaagaagagtttggtggtgaggaccatcagagc
ctaaattccattgttgatgttgaagatttgggcaaaattatggatcatgtgaagaaagaa
aaggcctgtgaaagtcagctcatcagaggataa

>gi568815591r:66888374_67095417|GENSCAN_predicted_peptide_7|172_aa
MGHHYMNKCLHLGIPEGEQKGYTRQHFCHESTLNKGDRDIYNLKHSPYCCYQFPLAGMGP
HILYLSQLASNLELFKRGKGRGEQRKEEVNCGMLRKQKITELEDTVIENEGKVKPFSDIR
KLKEFTTNKPALQEMFKKSLESPQETNIITHSCNYNLLNKLLPNPTEIQNSS

>gi568815591r:66888374_67095417|GENSCAN_predicted_CDS_7|519_bp
atgggacaccattacatgaacaaatgtttgcatttaggaattccagaaggagaacagaaa
gggtacactcgccagcacttctgccatgagagtacactgaacaaaggagacagggacatt
tataacctgaaacattcaccctactgctgttaccagtttccattggctggaatgggacct
cacattctgtatttgtcccaattggctagcaacttagaacttttcaaaagaggcaaaggc
agaggagaacaaaggaaggaggaagtaaattgtggaatgctcagaaagcaaaaaattact
gaacttgaagacacagtgatagaaaatgaaggcaaagtaaagccattttcagatatacga
aagctgaaagaattcaccaccaacaaacctgcactacaagagatgttcaaaaagtccttg
gagtcgccacaggaaactaatattattactcattcatgcaactataacctccttaataag
ctgctcccaaaccctacggagatccaaaacagcagctaa

>gi568815591r:66888374_67095417|GENSCAN_predicted_peptide_8|60_aa
XGVFRTQRFDLYQQASPPDALHWIPKPWEWTGPPPREGPSQKAEEPGSRGDKEPGLPPPH

>gi568815591r:66888374_67095417|GENSCAN_predicted_CDS_8|183_bp
nntggagtcttccgcacccagcgcttcgacctttaccagcaggcctccccaccagatgcc
ctgcactggatacctaagccttgggaatggacagggccgccacctcgagaagggccctcc
caaaaggcagaggagcctgggtcccgaggggacaaggagcctggtttgcccccaccccac
tga