GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:23:46

Sequence gi568815591f:55853196_56055175 : 201980 bp : 44.80% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  17435  17474   40                              -1.86
 1.01 Init +  18664  18771  108  0  0   77   39    96 0.236   3.82
 1.02 Intr +  21963  22054   92  2  2   77   93   -12 0.152  -3.01
 1.03 Intr +  24547  24591   45  1  0   70   83    84 0.887   3.62
 1.04 Intr +  24756  24956  201  0  0  -12   89   204 0.931   8.90
 1.05 Intr +  25894  25925   32  1  2   91   37    33 0.334  -3.73
 1.06 Intr +  34089  34303  215  1  2  108   41   172 0.290  12.93
 1.07 Intr +  34366  34485  120  0  0   34  105   113 0.728   8.29
 1.08 Term +  34787  34804   18  1  0  128   49    -3 0.727  -1.88
 1.09 PlyA +  35854  35859    6                               1.05

 2.00 Prom +  38529  38568   40                              -0.36
 2.01 Init +  68403  68639  237  2  0   92   43   163 0.824  10.21
 2.02 Intr +  69967  70093  127  0  1   43   68   162 0.531   9.95
 2.03 Intr +  70412  70504   93  0  0   38  111    52 0.667   2.44
 2.04 Term +  85787  86811 1025  0  2   44   32   391 0.219  21.38
 2.05 PlyA +  88285  88290    6                               1.05

 3.00 Prom +  89468  89507   40                              -5.06
 3.01 Init +  92627  92676   50  1  2   69   34    71 0.243   0.22
 3.02 Intr +  98621  98735  115  2  1   -7  105   105 0.431   3.15
 3.03 Term + 101714 101983  270  1  0   94   48   161 0.765   8.18
 3.04 PlyA + 103286 103291    6                               1.05

 4.00 Prom + 106699 106738   40                              -1.76
 4.01 Init + 111415 111506   92  0  2   99  105   173 0.999  18.06
 4.02 Intr + 124931 125070  140  2  2  107   65    72 0.436   6.91
 4.03 Term + 147879 148009  131  1  2    0   54   117 0.037  -2.16
 4.04 PlyA + 149500 149505    6                               1.05

 5.04 PlyA - 149514 149509    6                               1.05
 5.03 Term - 151868 151725  144  2  0   81   47   180 0.996  11.11
 5.02 Intr - 153621 153530   92  1  2   89   63    21 0.734  -0.59
 5.01 Init - 154783 154672  112  1  1   71   29    73 0.385   0.07
 5.00 Prom - 155012 154973   40                              -4.86

 6.07 PlyA - 157240 157235    6                               1.05
 6.06 Term - 158674 158567  108  1  0  121   38   137 0.999  10.51
 6.05 Intr - 161976 161828  149  1  2  109   34   103 0.992   6.95
 6.04 Intr - 164184 164039  146  2  2   80  107    12 0.933   2.23
 6.03 Intr - 166539 166405  135  2  0  100  116    66 0.994  10.28
 6.02 Intr - 168036 167878  159  2  0   93   23   145 0.791   7.60
 6.01 Init - 181274 180766  509  2  2   39  110   160 0.579   7.73
 6.00 Prom - 181862 181823   40                              -6.66

 7.00 Prom + 191313 191352   40                              -5.06
 7.01 Init + 198654 198790  137  2  2   91   67   303 0.998  26.11
 7.02 Intr + 198942 199077  136  0  1   61   35   122 0.840   4.77
 7.03 Intr + 201174 201308  135  2  0  101   21    99 0.748   5.26

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  16492  16390  103  1  1   60   68   115 0.975   5.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:55853196_56055175|GENSCAN_predicted_peptide_1|276_aa
MDNYHTERIAGEIDIPEMSGDGKEQRRAEAISISHRAVCCMLYAVCSSSVAGGRGAGLLS
VAAVLGSPAAEQFFPEYENPERDDPSTIEKLSKNKQKPITPETAEKLAHDLKIVKYVECS
ALTQKGLKNVFDEATLAALEPPESKKSHRVDPVFDETHERPENSGKARGRGPRGPHSPDE
KQTRESWWESGAPAMRIAMKEAGSERRQRMRIGDLRPASCAAIAGRLSSEQAAGPSAPSP
SRVHRGGGGGGGGGGGGVRGRSLPKRPLSAEIFGLL

>gi568815591f:55853196_56055175|GENSCAN_predicted_CDS_1|831_bp
atggataattaccacacagaaagaattgctggagagattgacatacctgagatgtctggg
gatggcaaggaacaaagaagggcagaagctatcagtatcagccacagagctgtatgctgt
atgctctatgcagtatgcagcagttctgttgcagggggtcggggagcagggttgctgtca
gtggcggcagtcctaggcagtcctgcagcagaacagttcttccctgaatacgagaaccca
gaaagagatgatccctctactattgagaaactttccaagaacaaacagaagcctatcact
ccagagactgctgaaaagctggcccatgacctgaagattgtcaagtatgtggagtgttct
gcactcacacagaaaggcctaaagaatgtatttgacgaagcaacattggctgcgctggag
cctccagaatcgaagaagagccacagagtagatccagtatttgatgaaactcatgaaaga
ccggaaaattctgggaaggctcgaggccgcggtccccggggtccgcatagtcccgatgaa
aaacagacccgggaaagctggtgggagtcaggagccccggcgatgaggattgcgatgaag
gaagcaggctcggagcgccgccagcgcatgcgtattggggatctgaggccagcgtcttgc
gccgccattgcggggaggctgtcctcagagcaggctgcggggccctcggcaccttctccc
tcccgggtccaccgcggcggcggcggcggcggcggcggcggcggcggcggcgtcaggggg
cggagcctgccgaagcgccctttgtctgcggagatttttggtcttttatag

>gi568815591f:55853196_56055175|GENSCAN_predicted_peptide_2|493_aa
MVEIARELELEVQPEDVVELLLKDEEKKWFLEMESVPGEDALNNVEMTIVDLEYSINLLD
KAAGGFEKTDSNFERSSTVESLTFQDVAVDFTREEWDQLYPAQKNLYRDVMLENYRNLVA
LGYQLCKPEVIAQLELEEEWVIERDSLLDTHPDGENRPEIKKSTTSQNISDENQTHEMIM
ERLAGDSFWYSILGGLWDFDYHPEFNQENHKRYLGQVTLTHKKITQERSLECNKFAENCN
LNSNLMQQRIPSIKIPLNSDTQGNSIKHNSDLIYYQGNYVRETPYEYSECGKIFNQHILL
TDHIHTAEKPSECGKAFSHTSSLSQPQMLLTGEKPYKCDECGKRFSQRIHLIQHQRIHTG
EKPFICNGCGKAFRQHSSFTQHLRIHTGEKPYKCNQCGKAFSRITSLTEHHRLHTGEKPY
ECGFCGKAFSQRTHLNQHERTHTGEKPYKCNECGKAFSQSAHLNQHRKIHTREKLCEYKC
EQTVRHSPSFSST

>gi568815591f:55853196_56055175|GENSCAN_predicted_CDS_2|1482_bp
atggtggaaatagcaagagaactagaattagaagtgcagcctgaagatgtggtggaattg
ctgcttaaggatgaggaaaaaaagtggtttcttgagatggaatcagttcctggtgaagat
gctttgaataatgtggaaatgacaatagtggatttagaatattccataaacttattagat
aaagcagcaggaggatttgaaaagactgactccaattttgaaagaagttctactgtggaa
tcactgacgtttcaggatgtggccgtggacttcaccagagaggagtgggaccagctgtac
cctgcccaaaagaacctctatcgagacgtgatgctggagaactacaggaatctagttgca
ctggggtatcagctttgtaagccagaggtaatcgcgcagttggagctagaggaagaatgg
gtgatagaaagagacagcctgctggatactcatccagatggagaaaacagacccgaaatc
aaaaagtcaaccacaagccagaatatttctgatgaaaatcaaacccatgagatgataatg
gagagactcgcaggagacagcttctggtactccatcctaggaggactctgggattttgat
taccatccagagtttaaccaagaaaaccacaagagatatttaggacaagtaactttgacc
cacaaaaagatcacacaggagagaagccttgagtgtaataaatttgcagaaaactgtaat
ctgaactcaaaccttatgcagcagagaattccttccattaaaatacccctgaattctgac
acacagggaaacagcatcaaacataattcagacttgatttactatcagggaaattatgta
agagagactccctatgaatatagtgagtgtggaaaaatcttcaatcaacatattcttctt
actgatcatattcatactgcagagaaacccagtgagtgtgggaaggccttcagccacacc
tcatctcttagccagcctcagatgttgcttacaggagagaagccctataagtgtgatgaa
tgtggaaaaagattcagccagaggatacatctcattcaacatcagagaattcacacagga
gaaaagccttttatatgcaatggatgtgggaaagccttccgtcagcattcatcctttact
caacatctgaggattcatactggagaaaagccctataaatgtaatcaatgtggtaaagct
tttagccgcatcacatcccttactgaacatcatagacttcataccggagagaaaccttac
gaatgtggtttctgtggcaaagccttcagtcagaggacacatctgaatcaacatgaaaga
actcatacaggagagaaaccctataaatgtaatgaatgcgggaaagcctttagccagagt
gcacaccttaatcaacacaggaaaatccatactcgggagaaattatgtgaatataaatgt
gagcaaactgttcgccacagtccttcatttagcagcacataa

>gi568815591f:55853196_56055175|GENSCAN_predicted_peptide_3|144_aa
MEFSEEDEQNLDIPEKRRCTAYERGSVGLSQCVRRDAIPLRPALPGAGGCIVLAEYFNKR
KTYFAHDALQQCTVGDIVLLRALPVPRAKHVKHELAEIVFKVGKVIDPVTGKPCAGTTYL
ESPLSSETTQLSKNLEELNISSAQ

>gi568815591f:55853196_56055175|GENSCAN_predicted_CDS_3|435_bp
atggaattctcagaagaggatgagcagaacttggacatcccagaaaaaaggagatgcacg
gcctacgagaggggtagtgtgggactgagccaatgcgtacggcgtgacgccatcccgctg
cgaccggcgctccccggggcaggtggctgcatagtcttggcggagtattttaataagcgg
aaaacctactttgctcacgatgcccttcagcagtgcacagttggggatattgtgcttctc
agagctttacctgttccacgagcaaagcatgtgaaacatgaactggctgagatcgttttc
aaagttggaaaagtcatagatccagtgacaggaaagccctgtgctggaactacctacctg
gagagtccgttgagttcggaaaccacccagctaagcaaaaatctggaagaactcaatatc
tcttcagcacagtga

>gi568815591f:55853196_56055175|GENSCAN_predicted_peptide_4|120_aa
MAARVLRARGAAWAGGLLQRAAPCSLLPRLRTWTSSSNRSREDSWLKSLFVRKVDPRKDA
HSNLLAKKETSNLYKLQLRLEELTKGVTVVRGEDQDEEEPAKETKKPPGNSADTQASEAS

>gi568815591f:55853196_56055175|GENSCAN_predicted_CDS_4|363_bp
atggcggcgcgagtgctgcgcgcccgcggagcggcctgggccggcggcctcctgcagcgg
gcggccccctgcagcctcctgcccaggctccggacatggacatcttccagcaacagatct
cgagaagacagctggctaaaatccttatttgtccggaaagttgatccaagaaaagatgcc
cactccaatctcctagccaaaaaggaaacaagcaatctatacaaattacagttgagacta
gaggagctcaccaagggagtgactgtagtcagaggagaggatcaagatgaggaggaacct
gcaaaagagactaagaaaccaccagggaactcagcagacactcaagcaagtgaggcgtca
tga

>gi568815591f:55853196_56055175|GENSCAN_predicted_peptide_5|115_aa
MADCPCDAIVHSDYEHRLRKQKELRIGIMKPRAEIFQAGKYPTRVHDSCEITFRAGTRGN
DFHTILYLSLNVVDPEVCLTQLPPGGHLPVGQLHAACSAGPTDPHTDTDCADMLQ

>gi568815591f:55853196_56055175|GENSCAN_predicted_CDS_5|348_bp
atggctgattgtccgtgtgacgccattgttcattctgattatgaacaccgcttacgtaaa
cagaaagagctaagaattgggatcatgaagccaagagcagaaatttttcaggctgggaaa
taccctaccagagttcatgacagctgtgagattacattcagagctggaacccgaggcaat
gatttccacaccattctttatctttccctcaatgtggtggatccagaagtctgccttaca
caactgccccctggtggccaccttcccgtgggacagttacatgcagcctgttcagcaggc
cccactgaccctcacaccgacacggactgtgcagatatgctgcagtga

>gi568815591f:55853196_56055175|GENSCAN_predicted_peptide_6|401_aa
MPNVDFKRGPPTEISLIAKSVQQSLASLTYPYPKWWWRQRGAASEGPGALFLCKAEVPQA
PCTSQTAGAEPPEEEGAGSGSPSPGAGPNRPPSPALQSRQIWCLQFTEALAELIRSHPAY
QQISRERSVEALGLHSSPPWELLARASEPALAPCSRKVAAAGAPEAQDTGRKILPAMVSH
SELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTE
RLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLN
IPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM
EACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGELEE

>gi568815591f:55853196_56055175|GENSCAN_predicted_CDS_6|1206_bp
atgccaaacgtggatttcaaaagaggccccccgacggagatttcactaattgctaaatca
gtgcagcagtcccttgcttccctcacctatccttatcctaagtggtggtggcggcagcgc
ggagcagcttctgaaggtccgggagctcttttcctctgcaaagcggaggtgccacaggca
ccgtgcacctctcagactgcaggggctgagcccccggaggaggagggggctggttcaggg
agcccctcccctggggcggggccaaatcgtcctcccagcccggctttgcagagcagacag
atctggtgtctccagtttacagaagcacttgcagaactcatcagaagccaccccgcttat
cagcagatctcaagagagcgttcggtggaggccctgggtctgcacagctcacctccctgg
gaactgctcgcccgagcgtcggagccggcgctggccccctgcagccggaaggttgcagcc
gcaggagccccggaggcccaggacacagggaggaaaattcttccagcgatggtctcccac
tcagagctgaggaagcttttctactcagcagatgctgtgtgttttgatgttgacagcacg
gtcatcagagaagaaggaatcgatgagctagccaaaatctgtggcgttgaggacgcggtg
tcagaaatgacacggcgagccatgggcggggcagtgcctttcaaagctgctctcacagag
cgcttagccctcatccagccctccagggagcaggtgcagagactcatagcagagcaaccc
ccacacctgacccccggcataagggagctggtaagtcgcctacaggagcgaaatgttcag
gttttcctaatatctggtggctttaggagtattgtagagcatgttgcttcaaagctcaat
atcccagcaaccaatgtatttgccaataggctgaaattctactttaacggtgaatatgca
ggttttgatgagacgcagccaacagctgaatctggtggaaaaggaaaagtgattaaactt
ttaaaggaaaaatttcattttaagaaaataatcatgattggagatggtgccacagatatg
gaagcctgtcctcctgctgatgctttcattggatttggaggaaatgtgatcaggcaacaa
gtcaaggataacgccaaatggtatatcactgattttgtagagctgctgggagaactggaa
gaataa

>gi568815591f:55853196_56055175|GENSCAN_predicted_peptide_7|136_aa
MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKIPTVPAISSRIDAVS
AENKAALERGVPRPLGLPGTLRTRHNLCGDGQIQHPTASLIAKVATAQDDITGDGTTSNV
LIIGELLKQADLYISE

>gi568815591f:55853196_56055175|GENSCAN_predicted_CDS_7|408_bp
atggcggcggtgaagaccctgaaccccaaggccgaggtggcccgagcgcaggcggcgctg
gcggtcaacatcagcgcagcgcggggtctgcaggacgtgctaaggaccaacctggggccc
aagggcaccatgaagatccccaccgtcccggccatttcttcccgcatcgatgcagtctcc
gcggagaacaaagcggctctagagcgcggcgttccccgccctctggggcttccaggcacc
ctgaggactcggcacaatctctgcggggacgggcaaattcaacacccaacagcttcctta
atagcaaaggtagcaacagcccaggatgatataactggtgatggtacgacttctaatgtc
ctaatcattggagagctgctgaaacaggcggatctctacatttctgaa