GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:25:40

Sequence gi568815591f:30652151_30855848 : 203698 bp : 48.96% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.27 PlyA -    452    447    6                               1.05
 1.26 Term -   1450   1310  141  1  0  116   46   149 0.991  11.43
 1.25 Intr -   2930   2889   42  2  0  143   64    79 0.998   9.44
 1.24 Intr -   3565   3430  136  0  1  111   75   222 0.996  23.77
 1.23 Intr -   3738   3620  119  0  2    2   68    57 0.529  -5.64
 1.22 Intr -   3862   3777   86  2  2  116   91    89 0.527  11.54
 1.21 Intr -   4433   4397   37  2  1   98   27    42 0.390  -3.06
 1.20 Intr -   8495   8423   73  1  1   86  107   160 0.998  17.11
 1.19 Intr -  10066  10006   61  2  1   96   98   133 0.953  12.89
 1.18 Intr -  10697  10544  154  2  1  101   31   380 0.934  33.25
 1.17 Intr -  13037  12920  118  1  1  119   26   205 0.786  17.87
 1.16 Intr -  13489  13380  110  1  2   64  101   277 0.692  25.68
 1.15 Intr -  15163  15078   86  2  2   73  113   104 0.953  10.94
 1.14 Intr -  22370  22332   39  0  0  117   94    -9 0.007   0.80
 1.13 Intr -  29890  29765  126  2  0  107   86   236 0.033  25.95
 1.12 Intr -  30182  30028  155  1  2  100   61   183 0.567  16.52
 1.11 Intr -  36492  36297  196  1  1   91   76     7 0.144  -1.73
 1.10 Intr -  37134  37041   94  0  1  134   96   111 0.975  16.04
 1.09 Intr -  43380  43351   30  0  0   95   94     7 0.520   0.33
 1.08 Intr -  46320  46195  126  0  0  107   34    44 0.615   1.78
 1.07 Intr -  47260  47109  152  2  2  122   81    -3 0.593   2.28
 1.06 Intr -  47708  47562  147  0  0    2   68   135 0.452   3.11
 1.05 Intr -  70888  70848   41  0  2  108  105    34 0.216   4.97
 1.04 Intr -  79403  79223  181  0  1   66   75    52 0.277   0.63
 1.03 Intr -  89703  89572  132  1  0   55   25    92 0.421   0.22
 1.02 Intr -  90570  90188  383  2  2   45   71   281 0.646  16.65
 1.01 Init -  92102  92017   86  2  2   89   36    65 0.475   1.76
 1.00 Prom -  97983  97944   40                              -6.06

 2.00 Prom +  98114  98153   40                              -3.86
 2.01 Init + 100001 100154  154  1  1  100   93   185 0.856  20.34
 2.02 Intr + 101581 101788  208  2  1  107   91   290 0.999  29.34
 2.03 Term + 103272 103701  430  0  1  118   52   595 0.998  53.67
 2.04 PlyA + 104819 104824    6                               1.05

 3.00 Prom + 110683 110722   40                              -2.76
 3.01 Init + 118844 118883   40  1  1   60   86    40 0.938   1.07
 3.02 Intr + 119198 119406  209  0  2   88   92   144 0.916  13.60
 3.03 Intr + 126282 126401  120  2  0   69   95   106 0.873  10.09
 3.04 Intr + 129827 130062  236  1  2   73   70     9 0.174  -5.91
 3.05 Intr + 133599 133842  244  0  1   78   75   118 0.337   7.00
 3.06 Intr + 138650 138760  111  1  0   58   56   120 0.976   6.38
 3.07 Intr + 139015 139424  410  0  2  105  109   170 0.531  13.87
 3.08 Intr + 148058 148124   67  2  1   87   85    64 0.229   4.91
 3.09 Intr + 151553 151692  140  1  2   58   64    13 0.001  -4.84
 3.10 Intr + 176529 176587   59  0  2   95   86    62 0.153   5.23
 3.11 Intr + 184508 184614  107  0  2   61  115    81 0.944   8.03
 3.12 Intr + 187319 187413   95  1  2   59   68    86 0.780   2.46
 3.13 Intr + 187944 188084  141  0  0   55   76    52 0.373   0.17
 3.14 Intr + 188610 188698   89  0  2   94   89    64 0.936   6.71
 3.15 Term + 189420 189487   68  1  2  131   42    53 0.962   3.10
 3.16 PlyA + 189489 189494    6                              -0.45

 4.06 PlyA - 189729 189724    6                               1.05
 4.05 Term - 191672 191598   75  2  0   89   43    71 0.199   0.54
 4.04 Intr - 194607 194401  207  0  0   50   61    95 0.325   2.27
 4.03 Intr - 196574 196492   83  0  2   84   47    76 0.438   2.46
 4.02 Intr - 201412 201249  164  0  2   91   68    26 0.512   0.52
 4.01 Intr - 202667 202420  248  2  2  147  100    66 0.755   9.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  29890  29706  185  2  2  107   50   306 0.967  26.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:30652151_30855848|GENSCAN_predicted_peptide_1|1016_aa
MSSKGKGPVVAGSRPCVEDSEKGAVRGVECPLKSACPDVDMYWAALQRLASLLKADGNLV
TMAALHSHYMVGSKKFFGLHPEKETVEKAMQEAGCQVQRCAPSAALRHAPSTTASALWLP
ARAPVSEASLAEEGLTERGSHDQSIYSLAPQLPLKAVQPKREASSEDSQVLAVGSSASML
REWEEAARASATDMKCPVGWDRKRHNCLLFLQYCKGSHLFYRGSKGRKLLKTQSERPAIR
LSDSQISPSLLPCRGGMTVERRLKWADELIHYLRGPGGWAGSGILVSDDELEIPCLGEGV
SGPGGWAGSGILVSDDELEIPCLVPGIRQPPVPDERWGQSGLWENQPLQGFLKTQSFIQP
HPVPLSRVRGHRWKIGAFQEIQVLGQGLPLSPSLWGPCCQPPKLVRRRKLLLAAPESVFR
AQGSAQAAGQSQMPKDQPLWALLEQYCHTIMTLTNLSGLHPQDGSGGDPCSGLGPLPGHK
ETRVLASTQTQPTGTAQARRQRESLAACSPSTGAVNSSGVGISHAGRALPLPLRTRLRDA
MDAALLHSLLEANCSLALAEELLLDGWGPPLDPEGPYSYCNTTLDQIGTCWPRSAAGALV
ERPCPEYFNGVKYNTTRGLPSSDLSSSAPGNAYRECLENGTWASKINYSQCEPILDDKQR
KYDLHYRIALVVNYLGHCVSVAALVAAFLLFLALRSIRCLRNVIHWNLITTFILRNVMWF
LLQLVDHEVHESNEVWCRCITTIFNYFVVTNFFWMFVEGCYLHTAIVMTYSTERLRKCLF
LFIGWCIPFPIIVAWAIGKLYYENEQCWFGKEPGDLVDYIYQGPIILVLLGAYEGSGVPG
HRDQFRISVQHRQDPNDKVTRVHHIRDNPVQEEVIGPSPCFLAEPSAPGLTQGARSSSRK
KHHHCLPPPTGKAVKATLVLLPLLGITYMLFFVNPGEDDLSQIMFIYFNSFLQSFQGFFV
SVFYCFFNGEVRSAVRKRWHRWQDHHSLRVPMARAMSIPTSPTRISFHSIKQTAAV

>gi568815591f:30652151_30855848|GENSCAN_predicted_CDS_1|3051_bp
atgagcagcaagggcaaaggcccagtggtggcggggagccgcccgtgtgtcgaggacagt
gaaaagggtgctgtgcgaggggtggagtgtcccctgaagagtgcctgtcctgatgtggac
atgtactgggcagccctgcagaggctggccagcctgctgaaagcagatgggaacctggtc
accatggctgccctgcactcccactatatggtaggctccaagaagttctttgggctccac
ccagagaaggagacggtggagaaggccatgcaggaggctggctgccaggtgcagaggtgt
gccccatcagctgctctgagacatgctccatcaacgacggcatctgctttgtggctgcct
gcaagggccccagtgtctgaggccagcctggcagaagagggcctgaccgagaggggaagt
catgaccagagcatctacagtcttgccccacagctccccctaaaagcagtgcagcccaag
agagaagcctcgagtgaagactcacaggtgctggctgtgggaagttcagccagcatgctg
agggaatgggaagaggcagcaagagcatctgcaacagacatgaaatgtcctgttggctgg
gaccgcaaaaggcataactgcttgcttttccttcagtactgcaaaggaagtcatcttttc
taccgcggcagcaaaggcagaaagcttctgaaaacccagtcagagaggccagccattcgg
ctttcagacagccagataagcccctcgctcctgccttgccgtgggggaatgacagtagaa
aggaggctgaagtgggcagatgagctcattcactacctcagagggcctggtggctgggct
ggatcggggatccttgtgtctgatgatgaattggagatcccgtgcctgggtgagggggtc
tcagggcctggtggctgggctggatcggggatccttgtgtctgatgatgaattggagatc
ccgtgcctggtgcctggaatcaggcagcccccagtaccagatgagcgatggggacagagt
gggctctgggagaaccagcctctccaagggtttctcaagactcagagcttcatccagcca
caccccgtgcctttgtccagagtcaggggccaccgatggaagataggtgccttccaggag
atccaagtgttggggcaagggttgcccctcagcccgtccctctggggtccatgctgccag
ccgcccaagctggttagacggaggaagcttctgctggctgctccagagtcagtgttcagg
gcccagggctcggcacaggcagccgggcagagccagatgcccaaagaccagcccctgtgg
gcacttctggagcagtactgccacaccatcatgaccctcaccaacctctcaggtctgcat
ccacaggatgggagtgggggtgacccttgctcgggcctggggccactgccagggcacaag
gagacaagggtgctggccagcacccagacccagcctacaggcactgcccaagccaggcgt
caaagagaaagtcttgctgcctgttctccttccactggggcagtcaatagctccggtgtt
gggatcagtcacgccgggcgcgcactcccactccctctccgcacgcggctgcgggacgcg
atggacgcggcactgctccacagcctgctggaggccaactgcagcctggcgctggctgaa
gagctgctcttggacggctgggggccacccctggaccccgagggtccctactcctactgc
aacacgaccttggaccagatcggaacgtgctggccccgcagcgctgccggagccctcgtg
gagaggccgtgccccgagtacttcaacggcgtcaagtacaacacgacccgtggtctcccc
tcttcagacctcagttcatctgcaccagggaatgcctatcgagaatgcttggagaatggg
acgtgggcctcaaagatcaactactcacagtgtgagcccattttggatgacaagcagagg
aagtatgacctgcactaccgcatcgcccttgtcgtcaactacctgggccactgcgtatct
gtggcagccctggtggccgccttcctgcttttcctggccctgcggagcattcgctgtctg
cggaatgtgattcactggaacctcatcaccacctttatcctgcgaaatgtcatgtggttc
ctgctgcagctcgttgaccatgaagtgcacgagagcaatgaggtctggtgccgctgcatc
accaccatcttcaactacttcgtggtgaccaacttcttctggatgtttgtggaaggctgc
tacctgcacacggccattgtcatgacctactccactgagcgcctgcgcaagtgcctcttc
ctcttcatcggatggtgcatccccttccccatcatcgtcgcctgggccatcggcaagctc
tactatgagaatgaacagtgctggtttggcaaggagcctggcgacctggtggactacatc
taccaaggccccatcattctcgtgctcctgggtgcctacgaaggctctggagttcctggg
cacagggatcaatttcgtatttctgttcaacatcgtcaggatcctaatgacaaagttacg
cgcgtccaccacatccgagacaatccagtacaggaggaggtcatcgggccgtccccctgc
ttcctggcagagccctctgccccaggcctcacccagggagctcgctcaagctcccggaag
aaacaccaccactgtctcccgccgcccactgggaaggcagtgaaggccaccctggtgctc
ctgcccctcctgggcatcacctacatgctcttcttcgtcaatcccggggaggacgacctg
tcacagatcatgttcatctatttcaactccttcctgcagtcgttccagggtttcttcgtg
tctgtcttctactgcttcttcaatggagaggtgcgctcagccgtgaggaagaggtggcac
cgctggcaggaccatcactcccttcgagtccccatggcccgggccatgtccatccctaca
tcacccacacggatcagcttccacagcatcaagcagacggccgctgtgtga

>gi568815591f:30652151_30855848|GENSCAN_predicted_peptide_2|263_aa
MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI
DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN
SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL
CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQLLHSPQ
SYSVTNAANNGVCFIVARKKPGP

>gi568815591f:30652151_30855848|GENSCAN_predicted_CDS_2|792_bp
atgaagggtggcttcactgggggtgatgagtaccagaagcacttcctgcccagggactac
ttggctacttactacagcttcgatggcagcccctcacccgaggccgagatgctgaagttt
aacttggaatgtctccacaagaccttcggccctggaggcctccaaggggacacgctgatt
gacattggctcaggtcctaccatctaccaagttcttgctgcctgtgattccttccaagac
atcactctctccgactttaccgaccgcaaccgggaggagctggaaaagtggctgaagaag
gagccgggggcctatgactggaccccagcggtgaaattcgcctgtgagctggaaggaaac
agcggccgatgggaggagaaggaggagaagctgcgggcagcggtgaagcgggtgctcaag
tgcgatgtccacctgggcaacccgctggccccggctgtgttgcctctcgccgactgtgtg
ctcaccctgctggccatggagtgtgcctgctgtagccttgatgcctaccgcgctgccctg
tgcaaccttgcctcactgctcaagccgggtggccacctggtgaccactgtcacgcttcgg
ctcccgtcctacatggtggggaagcgtgaattttcctgcgtggccctggagaaagaggag
gtggagcaggctgtcctggatgctggctttgacattgaacagctcctacacagtccccag
agctactctgtcaccaatgctgccaacaatggggtctgcttcattgtggctcgcaagaag
cctgggccctga

>gi568815591f:30652151_30855848|GENSCAN_predicted_peptide_3|711_aa
MLGFLAPTVKARQARQPQGRGGVLAAPTPPSPRQRGHTAPDRPSCLVLRPGVGLVGRARA
RAMDSLFVEEVAASLVREFLSRKGLKKTCVTMDQERPRSDLSINNRNDLRKVLHLEFLYK
ENKAKENPLKTSLELITRYFLDHFGNTANNFTQDTPIPALSVPKKNNKVPSRCSETTLVN
IYDLSDEDAGWRTSLSETSKARHDNLDGDVLGNFVSSKRPPHKSKPMQTVPGETPVLTSA
WEKIDKLHSEPSLDVKRMGENSRPKSGLIVRGMMSGPIASSPQVRKSGTEKLSSLPQVTQ
LVGGDADWSDGFTCCMNLLSDSFHRHYLRRSSPSSSSTQPQEESRKVPELFVCTQQDILA
SSNSSPSRTSLGQLSELTVERQKTTASSPPHLPSKRLPPWDRARPRDPSEDTPAVDGSTD
TDRMPLKLYLPGGNSRMTQERLERAFKRQGSQPAPVRYYSKDKLQSLSLDITLDALDALG
GKFAGIPGVSFLKTEAALLFFPSVFFYGLHWVLLHLQTFLDNVHLWKNQLLPSDKVDGEL
GALRLEDVEDELIREEVILSPVPSVLKLQTASKPIDLSVAKALQMWLVQQELGNKTLCFG
DVKIEHGFKEHLLQSLNLDEVCLCCSVPLAFANVSQESDPVLSPVMPTEMSSSRSLCTTG
VVLAESWQLSKAVSYRNSCLKEIAKPTVLSPVTSLYRVTLRATELLAIGLF

>gi568815591f:30652151_30855848|GENSCAN_predicted_CDS_3|2136_bp
atgctgggcttccttgcccccaccgtcaaggcccgccaagcccgccagccccagggaagg
ggaggagttcttgccgcgccgacgccgccgtcgccacggcaacgcggccatactgcgccg
gacagacccagttgcctggtgctgcggcccggcgtgggcctcgtgggcagagccagagcc
agagccatggacagcctcttcgtggaggaggtggccgcctccttggtcagggagttcctc
agcagaaagggcttaaagaagacatgtgtgaccatggaccaggaacgcccacgctctgac
ctcagcataaacaacagaaatgatcttcgaaaggttttgcatcttgaatttctctataag
gagaacaaggcaaaggaaaatcctctaaaaacaagccttgaactcatcaccagatacttt
ctggatcactttggaaatacggctaacaatttcactcaagataccccaatccctgcactc
tcagttccaaagaaaaataacaaagtgccatcaagatgctcagagactacactggtaaat
atatatgacctttcagatgaagatgcaggatggagaacatcattgtcagaaacaagcaaa
gccagacatgacaatcttgatggagatgtacttggtaattttgtatcatctaaaaggccc
ccgcacaaaagtaagcccatgcagacggtcccgggtgaaactcctgtgttgacttctgca
tgggagaagatagacaagcttcactcggagccttccttggatgtgaagaggatgggagag
aattccaggccaaagtctggtctgattgtgcgaggcatgatgtctgggcccatcgccagc
tccccacaggtgaggaaatcagggacagagaagttaagcagcttgccacaggtgacacag
ttggtaggtggtgatgcagactggagcgacggcttcacctgctgcatgaacctgctctct
gattcttttcacagacactatctgagacggtcctcaccgtcaagcagctccacccaaccc
caagaagagagccggaaggtccctgagctctttgtctgcacccaacaggacattctggct
tcgagcaacagctccccctccaggacctccctgggtcagcttagtgaactgaccgtagaa
aggcagaaaaccactgccagcagccctccccatctgcccagcaaacggctgcccccatgg
gacagggccaggccgagggatccctccgaggacaccccagcagtggacggcagcacagac
acggacaggatgcccttgaagctctacttgcctggtggtaattccaggatgacccaggag
aggctggaaagagcgttcaaacggcagggcagccagcccgcacctgtcaggtattacagt
aaagataaactgcaaagcctgtccctggatatcaccttagatgcattggatgccctgggg
ggaaagtttgctggtatccctggggtctcattcctaaagactgaagcagctctcttgttc
ttccccagcgtgtttttctacggcctgcattgggttttgctgcatttgcagacatttttg
gataatgtacacttatggaaaaatcagttgctgccgtctgacaaggtggatggtgagctg
ggtgccctgcggctcgaggatgtggaggatgagttgataagggaagaggtcatcctgtcg
ccagtcccatcagtgctcaagttgcagacagcatcaaaaccaattgacctctcagtagca
aaggcacttcagatgtggctggtgcagcaagagctggggaataagaccctctgctttgga
gatgttaaaattgaacatggatttaaggagcacttgctacaatccttaaacctggatgag
gtctgtttgtgttgttcagtcccactagcctttgccaatgtgtcccaggagtcagatcct
gtgctaagccccgtgatgcctacagagatgagctcctcaagaagcctctgcaccacaggg
gtggtccttgcggagtcctggcagctgtccaaggctgtgtcctacagaaactcctgtttg
aaggagatagcaaagccgactgtgctcagcccggttaccagcttgtaccgagtcaccctc
agagctacagaacttctggcaattggccttttttaa

>gi568815591f:30652151_30855848|GENSCAN_predicted_peptide_4|258_aa
GRPHCLPKGHLVLPGPDHFPGLCPGLQGLWESSAEGSLTAGALVLVPFPASSPTLRLTTK
PSSAFCGAKKNGSHIQKVKGKARVGRQENNSSSQHCSHSEIRRLSDAHPTGVRHASYLMN
ALLKKSHQVLIAGQTVKRSPSCSLEEIVTKHSPNRMPQLLGALAQSMEKLSSTKPVPGAK
KAGDRGFNPPQISQGCMCLRENLHPQMMTGKGPASESPRPLPDSSAHAFTGRTQPQDPLG
CTILGLQLGGTCLAGNDR

>gi568815591f:30652151_30855848|GENSCAN_predicted_CDS_4|777_bp
ggtaggccccattgcctacccaagggacatctggtgctgccagggcctgatcatttccca
gggctgtgcccaggccttcagggtctttgggaaagttctgcggaaggcagtctgacagca
ggagctttagtcctggtcccatttccagcaagttctcccactctccggcttaccaccaaa
ccctccagtgccttctgtggggccaaaaagaatggatcccacatccagaaggtcaaaggg
aaggcaagggtgggacgacaggagaacaactccagttcacagcattgttcccacagtgaa
atcagaaggcttagtgacgcacatcccacaggagtaaggcatgcttcatacctgatgaat
gctttgttgaagaaaagtcaccaggtcctcatagcaggtcaaactgtgaagcgaagccca
tcatgttccttggaggaaatagttaccaagcattcaccgaaccggatgccccagctgctg
ggagcactggcccagtccatggaaaaattgtcttccacaaaaccagtccctggtgccaaa
aaggctggggaccgtggatttaacccaccccagattagccagggctgtatgtgcctgcgt
gagaacctgcacccacagatgatgacagggaaaggtcctgcgtctgaatcacccaggcct
ttaccagatagctcagcgcacgccttcactggcagaacccagccccaggacccactgggc
tgcaccatccttggcctgcagctaggaggtacctgcctggccggcaacgacagatag