GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:25:08

Sequence gi568815591f:26052499_26285780 : 233282 bp : 43.46% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6144   6338  195  0  0   58   58   144 0.235   6.93
 1.02 Intr +  16422  16491   70  0  1  114   37    66 0.222   3.28
 1.03 Intr +  27142  27170   29  0  2   75   86    33 0.096  -1.29
 1.04 Intr +  27881  27955   75  2  0   94   80    41 0.199   2.53
 1.05 Intr +  40414  40536  123  1  0   69   44    97 0.652   3.10
 1.06 Intr +  45687  45904  218  0  2   44   95   102 0.813   4.65
 1.07 Intr +  49117  49252  136  2  1   56   81    88 0.570   4.53
 1.08 Intr +  49981  50053   73  1  1   66  101    36 0.562   2.11
 1.09 Intr +  52546  52581   36  0  0  102   86     9 0.304   0.56
 1.10 Intr +  70439  70640  202  1  1   25  108    88 0.043   3.36
 1.11 Term +  71604  71719  116  1  2   58   44   187 0.593  10.03
 1.12 PlyA +  74287  74292    6                               1.05

 2.00 Prom +  97209  97248   40                              -4.16
 2.01 Init + 100001 100570  570  1  0   92   92   816 0.138  75.49
 2.02 Intr + 125445 125624  180  2  0   52   99   164 0.993  13.96
 2.03 Term + 132035 133285 1251  1  0  125   54   321 0.893  23.99
 2.04 PlyA + 133770 133775    6                               1.05

 3.10 PlyA - 135111 135106    6                               1.05
 3.09 Term - 137962 137900   63  1  0   98   48    79 0.426   2.79
 3.08 Intr - 141196 141077  120  1  0   37   75   160 0.248  10.29
 3.07 Intr - 143411 143349   63  2  0   85   78    88 0.251   6.41
 3.06 Intr - 143983 143903   81  1  0   23  105    88 0.239   3.83
 3.05 Intr - 144160 144123   38  2  2   52   63    27 0.144  -5.42
 3.04 Intr - 144519 144309  211  0  1   70   92   227 0.878  19.79
 3.03 Intr - 144963 144817  147  0  0   42   99    45 0.493   1.43
 3.02 Intr - 145234 145124  111  1  0   86   68    68 0.658   5.18
 3.01 Init - 148079 148074    6  2  0   94   82     0 0.289   0.87
 3.00 Prom - 150152 150113   40                              -5.86

 4.00 Prom + 151167 151206   40                              -6.26
 4.01 Init + 153876 154012  137  2  2   54   52   140 0.678   6.61
 4.02 Intr + 155895 156057  163  0  1   10   87   132 0.959   5.28
 4.03 Intr + 159164 159258   95  1  2   48  101    76 0.909   3.66
 4.04 Intr + 192321 192476  156  0  0   88   18    99 0.165   2.03
 4.05 Intr + 192872 193105  234  2  0   74   53   131 0.073   5.00
 4.06 Term + 195572 195779  208  2  1   36   52   136 0.206   1.61
 4.07 PlyA + 196093 196098    6                               1.05

 5.04 PlyA - 197134 197129    6                               1.05
 5.03 Term - 197572 197416  157  0  1   29   36   149 0.007   1.21
 5.02 Intr - 210712 210649   64  2  1   96   54    34 0.037  -1.42
 5.01 Init - 214921 214885   37  1  1   76  106     8 0.444   1.57
 5.00 Prom - 220199 220160   40                              -1.66

 6.02 PlyA - 223033 223028    6                               1.05
 6.01 Term - 223853 223663  191  0  2   44   38   161 0.404   4.31

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 100001 100771  771  1  0   92   49   871 0.823  77.66
S.002 Term + 159584 159710  127  2  1  104   32    51 0.851  -1.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:26052499_26285780|GENSCAN_predicted_peptide_1|424_aa
XCVNQLAASAAERGDSFPPPVFHGAIHGPSCELAVQKHKAPWPSFRSQSFRSQQGHAASG
ERPVIILCQRLLLAEPNEKPGSLGNVMAVARIEIGICEYYHEKTTEKALDSHGVLAGSTI
KGVRSFQRNLELKLPATERATANAIELLTVLDQAYENFAPQILPSTGSPTSQETAQFKAN
QNKPLVRGKGSPHEAIRYISAAHREWKPAILTSAIRSFCSTWLVFTSKNFPKLVTQHGST
IAGNGQSSDETQVQGAAWKSDSRGTKRQIPTWILAEGNNAGAQLDIPGPTIPAPNCSLKV
PQSWSTTPSMPSSLGKAYWLLACYWALVETEHWLWVIKSPCKPELPVMNWVLSDPSSHKV
GGAQQHSINKWKWYIRNRARAGPEGTTLPLTKALTLWLKKYSNVLMLVEFTGLTMFPDIL
KQLE

>gi568815591f:26052499_26285780|GENSCAN_predicted_CDS_1|1275_bp
nnatgtgtgaatcagcttgctgcttcggcagcagaacgtggagacagctttccacccccg
gttttccacggggcaatacacggaccatcgtgtgagctggcggtgcagaagcataaagct
ccttggccatcattccgttcacaatcattccgttcacaacagggccatgctgcatctggg
gaaaggccggtgatcatcctctgccagcgcctcttattggctgaacctaatgagaagcca
gggagcctgggaaatgtgatggctgtggcaagaatagaaattggaatctgtgagtattac
catgagaaaaccacagagaaagctctggacagccatggagtcttagctggatctacaata
aaaggagtcagaagctttcagaggaatttggagctgaagttgccagcaacagagagggcc
acagctaacgcgatagagctgctcacagtgttagaccaggcctatgaaaactttgcaccg
cagatcctccccagcactggcagccccacgtcccaggaaactgctcagttcaaggcaaac
cagaacaaaccattggtcagaggaaaaggaagcccacatgaggccataagatatatttca
gctgcccatcgagaatggaagccagcaatcctgacatcagccattaggtcattttgttct
acctggctggtgttcacctccaagaactttcccaagcttgtgacccaacatggaagtacg
atagcaggaaacgggcagagctcagatgagacccaagtccagggtgcagcctggaagtct
gattccagaggaacaaagagacaaataccaacgtggattctggcagaggggaacaatgca
ggtgcccaacttgacatcccaggcccaaccatccctgctcctaattgttccctgaaggtg
ccccagagctggagtaccacgcccagcatgccctcctcactagggaaggcctactggctc
ttggcctgttactgggccttggtggaaactgaacattggctatgggtcatcaagtcacca
tgtaaacctgaactgcctgtcatgaactgggtgctttctgacccatctagccataaagtg
ggtggtgcacagcagcattccatcaacaaatggaagtggtatatacgtaatcgggctcga
gcaggtcctgaaggcacaacattgcctctgaccaaggcactcactttatggctaaagaag
tacagcaacgtgctcatgctcgtggaatttaccggtcttaccatgttccccgacatcctg
aagcagctggaatga

>gi568815591f:26052499_26285780|GENSCAN_predicted_peptide_2|666_aa
MKHLKRWWSAGGGLLHLTLLLSLAGLRVDLDLYLLLPPPTLLQDELLFLGGPASSAYALS
PFSASGGWGRAGHLHPKGRELDPAAPPEGQLLREVRALGVPFVPRTSVDAWLVHSVAAGS
ADEAHGLLGAAAASSTGGAGASVDGGSQAVQGGGGDPRAARSGPLDAGEEEKAPAEPTAQ
VPDAGGCASEENGVLREKHEAVDHSSQHEENEERVSAQKENSLQQNDDDENKIAEKPDWE
AEKTTESRNEGISLGDIPLPGSISDGMNSSAHYHVNFSQAISQDVNLHEAILLCPNNTFR
RDPTARTSQSQEPFLQLNSHTTNPEQTLPGTNLTGFLSPVDNHMRNLTSQDLLYDLDINI
FDEINLMSLATEDNFDPIDVSQLFDEPDSDSGLSLDSSHNNTSVIKSNSSHSVCDEGAIG
YCTDHESSSHHDLEGAVGGYYPEPSKLCHLDQSDSDFHGDLTFQHVFHNHTYHLQPTAPE
STSEPFPWPGKSQKIRSRYLEDTDRNLSRDEQRAKALHIPFSVDEIVGMPVDSFNSMLSR
YYLTDLQVSLIRDIRRRGKNKVAAQNCRKRKLDIILNLEDDVCNLQAKKETLKREQAQCN
KAINIMKQKLHDLYHDIFSRLRDDQGRPVNPNHYALQCTHDGSILIVPKELVASGHKKET
QKGKRK

>gi568815591f:26052499_26285780|GENSCAN_predicted_CDS_2|2001_bp
atgaagcacctgaagcggtggtggtcggccggcggcggcctcctgcacctcaccctcctg
ctgagcttggcggggctccgcgtagacctagatctttacctgctgctgccgccgcccacc
ctgctgcaggacgagctgctgttcctgggcggcccggccagctccgcctacgcgctcagc
cccttctcggcctcgggagggtgggggcgcgcgggccacttgcaccccaagggccgggag
ctggaccctgccgcgccgcccgagggccagctgctccgggaggtgcgcgcgctcggggtc
cccttcgtccctcgcaccagcgtggatgcatggctggtgcacagcgtggctgccgggagc
gcggacgaggcccacgggctgctcggcgccgccgccgcctcgtccaccggaggagccggc
gccagcgtggacggcggcagccaggctgtgcaggggggcggcggggacccccgagcggct
cggagtggccccttggacgccggggaagaggagaaggcacccgcggaaccgacggctcag
gtgccggacgctggcggatgtgcgagcgaggagaatggggtactaagagaaaagcacgaa
gctgtggatcatagttcccagcatgaggaaaatgaagaaagggtgtcagcccagaaggag
aactcacttcagcagaatgatgatgatgaaaacaaaatagcagagaaacctgactgggag
gcagaaaagaccactgaatctagaaatgagggcatctcattgggagatattcctcttcca
ggcagtatcagtgatggcatgaattcttcagcacattatcatgtaaacttcagccaggct
ataagtcaggatgtgaatcttcatgaggccatcttgctttgtcccaacaatacatttaga
agagatccaacagcaaggacttcacagtcacaagaaccatttctgcagttaaattctcat
accaccaatcctgagcaaacccttcctggaactaatttgacaggatttctttcaccggtt
gacaatcatatgaggaatctaacaagccaagacctactgtatgaccttgacataaatata
tttgatgagataaacttaatgtcattggccacagaagacaactttgatccaatcgatgtt
tctcagctttttgatgaaccagattctgattctggcctttctttagattcaagtcacaat
aatacctctgtcatcaagtctaattcctctcactctgtgtgtgatgaaggtgctataggt
tattgcactgaccatgaatctagttcccatcatgacttagaaggtgctgtaggtggctac
tacccagaacccagtaagctttgtcacttggatcaaagtgattctgatttccatggagat
cttacatttcaacacgtatttcataaccacacttaccacttacagccaactgcaccagaa
tctacttctgaaccttttccgtggcctgggaagtcacagaagataaggagtagatacctt
gaagacacagatagaaacttgagccgtgatgaacagcgtgctaaagctttgcatatccct
ttttctgtagatgaaattgtcggcatgcctgttgattctttcaatagcatgttaagtaga
tattatctgacagacctacaagtctcacttatccgtgacatcagacgaagagggaaaaat
aaagttgctgcgcagaactgtcgtaaacgcaaattggacataattttgaatttagaagat
gatgtatgtaacttgcaagcaaagaaggaaactcttaagagagagcaagcacaatgtaac
aaagctattaacataatgaaacagaaactgcatgacctttatcatgatatttttagtaga
ttaagagatgaccaaggtaggccagtcaatcccaaccactatgctctccagtgtacccat
gatggaagtatcttgatagtacccaaagaactggtggcctcaggccacaaaaaggaaacc
caaaagggaaagagaaagtga

>gi568815591f:26052499_26285780|GENSCAN_predicted_peptide_3|279_aa
MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM
AEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYF
EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEATLALGIHV
VAVEISDQDQEVTLEEDLMDMAVDVDLGMAIMGMEEDLEVAILEVAPVMEEEEEDMVVED
LDMATRVGATEVVMTTMEEEGVLLQVTNEEVVNHRVFKK

>gi568815591f:26052499_26285780|GENSCAN_predicted_CDS_3|840_bp
atggagagagaaaaggaacagttccgtaagctctttattggtggcttaagctttgaaacc
acagaagaaagtttgaggaactactacgaacaatggggaaagcttacagactgtgtggta
atgagggatcctgcaagcaaaagatcaagaggatttggttttgtaactttttcatccatg
gctgaggttgatgctgccatggctgcaagacctcattcaattgatgggagagtagttgag
ccaaaacgtgctgtagcaagagaggaatctggaaaaccaggggctcatgtaactgtgaag
aagctgtttgttggcggaattaaagaagatactgaggaacatcaccttagagattacttt
gaggaatatggaaaaattgataccattgagataattactgataggcagtctggaaagaaa
agaggctttggctttgttacttttgatgaccatgatcctgtggataaaatcgtattgcag
aaataccataccatcaatggtcataatgcagaagcaactttggctttggggattcacgtg
gtggcggtggaaatttcggaccaggaccaggaagtaactttagaggaggatctgatggat
atggcagtggacgtggatttggggatggctataatgggtatggaggaggacctggaggtg
gcaattttggaggtagccccggttatggaggaggaagaggaggatatggtggtggaggac
ctggatatggcaaccagggtgggggctacggaggtggttatgacaactatggaggaggaa
ggtgtcttgctgcaggtaactaatgaagaagtggtcaaccacagagtcttcaagaaataa

>gi568815591f:26052499_26285780|GENSCAN_predicted_peptide_4|330_aa
MGKKQNGKSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCP
ELIEAFLNSQKAGKEKDGTKRKSLSDSESDDSKSKKKRDAADKPRGFARGLDPERIIGAT
DSSGELMFLMKCPYLFLSTAFFNPESLLIVFSVAIFPAAIFPVSCIHFFSYTIPPQDNSS
IACTAAMKATGPDNAQSQVSPPGHAPSAEDPTGSRTVSSPCEDRPHPFLSWPTWISLALL
LKTDGALERMPQQLPSLHPSQGKLLQAAMLLQKVAIIHCRGHQTPDNPIIAGNALADQVA
KEVALQPVQDQFLSLSLFSPLYSSEEKEDF

>gi568815591f:26052499_26285780|GENSCAN_predicted_CDS_4|993_bp
atgggaaaaaaacagaatggaaagagtaaaaaagttgaagaggcagagcctgaagaattt
gtcgtggaaaaagtactagatcgacgtgtagtgaatgggaaagtggaatatttcctgaag
tggaagggatttacagatgctgacaatacttgggaacctgaagaaaatttagattgtcca
gaattgattgaagcgtttcttaactctcagaaagctggcaaagaaaaagatggtacaaaa
agaaaatctttatctgacagtgaatctgatgacagcaaatcaaagaagaaaagagatgct
gctgacaaaccaagaggatttgccagaggtcttgatcctgaaagaataattggtgccaca
gacagcagtggagaattgatgtttctcatgaaatgcccctaccttttcctctcaactgcc
ttctttaaccccgaaagcctcctcattgtcttctcagttgccatcttcccagccgccatc
ttcccagtcagctgtatccacttcttttcctacaccatcccccctcaggacaattctagt
attgcttgcactgcggcaatgaaggccactggtccagacaatgcccaaagccaggtaagc
ccaccaggccatgccccctctgcggaggaccccactggaagtcggactgtgagcagcccc
tgcgaggaccgcccccatcccttcctgagctggcctacttggatctcattggccttgctg
ctgaagactgacggtgccctggaacggatgccccagcaactaccatcgcttcatccaagc
caaggcaaactccttcaagctgccatgctcctgcagaaagttgccatcattcattgcaga
ggccaccaaaccccagacaatcctataatagctggaaatgcgctggcagatcaggtagcc
aaagaagtagctctacaacccgtgcaagaccagtttctgtccctgtcgctgttctctcct
ctttactcctcagaagaaaaggaggacttctga

>gi568815591f:26052499_26285780|GENSCAN_predicted_peptide_5|85_aa
MISERKEKNFLKSAHSELAVISEKKEIILIMLKSRSIVWIVWRLTVLSTRVLMAFSFYYQ
WDNTGEKQKEPNDEDYCPYQCFKSS

>gi568815591f:26052499_26285780|GENSCAN_predicted_CDS_5|258_bp
atgatatcagaaaggaaagagaaaaactttttgaaaagtgctcatagtgaattggcagta
atttcagagaagaaggagattattctcataatgcttaagagcaggagcatcgtctggatt
gtctggcggttaactgtactttcaacaagagttttaatggcttttagcttttattatcag
tgggataacacaggggagaaacagaaggagcccaatgatgaagattactgtccctaccag
tgctttaaatcctcctaa

>gi568815591f:26052499_26285780|GENSCAN_predicted_peptide_6|63_aa
XKSVQPSLILFTEMIYRFLAPVLSALLIRDPTRRPKEIQNFAPEDSPHPCFDILNARKKE
KSN

>gi568815591f:26052499_26285780|GENSCAN_predicted_CDS_6|192_bp
nggaagtctgttcagccgtccctgatcctcttcacggagatgatatacagatttttggct
cctgtattgtcagcattgttgatcagggatcctaccagaagacccaaggaaatccagaat
tttgcaccagaggactcaccacatccttgcttcgacatcttgaatgccagaaagaaggaa
aaaagcaattga