GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:59:38

Sequence gi568815591r:22718000_22922779 : 204780 bp : 41.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    666    720   55  2  1   69   93    40 0.416   4.10
 1.02 Intr +   8307   8669  363  1  0   -4   27   232 0.076   2.13
 1.03 Intr +   9445   9635  191  2  2   93   90   216 0.706  20.68
 1.04 Intr +  10694  10807  114  1  0   85   66   105 0.896   7.72
 1.05 Intr +  11515  11661  147  0  0  102   98   112 0.932  13.11
 1.06 Term +  13407  13574  168  2  0   94   39   201 0.998  12.70
 1.07 PlyA +  13897  13902    6                               1.05

 2.00 Prom +  15834  15873   40                              -6.55
 2.01 Sngl +  23178  23582  405  2  0   91   38   147 0.746   6.03
 2.02 PlyA +  23908  23913    6                               1.05

 3.03 PlyA -  23953  23948    6                               1.05
 3.02 Term -  48822  48693  130  2  1  -23   37   186 0.074  -0.93
 3.01 Init -  55994  55651  344  2  2   75   75   362 0.148  30.35
 3.00 Prom -  71163  71124   40                              -5.25

 4.03 PlyA -  71566  71561    6                               1.05
 4.02 Term -  78064  77616  449  2  2  -17   47   260 0.481   5.79
 4.01 Init -  78548  78449  100  2  1  100  113    49 0.404   9.08
 4.00 Prom -  87650  87611   40                              -4.55

 5.00 Prom +  93257  93296   40                              -2.65
 5.01 Init +  97344  97420   77  2  2   67   53    21 0.175  -2.88
 5.02 Intr + 101938 102060  123  1  0   63   64   113 0.311   5.18
 5.03 Intr + 104101 104204  104  1  2   72  110    55 0.175   5.00
 5.04 Intr + 104650 104681   32  2  2   80   99    11 0.168  -1.67
 5.05 Intr + 104772 104852   81  2  0   53   69   123 0.159   5.82
 5.06 Term + 115536 115691  156  2  0  120   55    71 0.806   3.95
 5.07 PlyA + 116224 116229    6                               1.05

 6.05 PlyA - 116745 116740    6                               1.05
 6.04 Term - 126711 126541  171  0  0   27   54   118 0.245  -0.86
 6.03 Intr - 128647 128546  102  1  0   94   92    57 0.506   6.15
 6.02 Intr - 135854 135661  194  0  2   60   46   130 0.254   4.29
 6.01 Init - 147357 147087  271  0  1   68   14   254 0.715  13.18
 6.00 Prom - 147633 147594   40                             -10.25

 7.00 Prom + 149010 149049   40                             -11.64
 7.01 Init + 150207 150275   69  2  0   51   80    88 0.041   5.40
 7.02 Intr + 157030 157213  184  0  1   91    7   225 0.013  13.14
 7.03 Intr + 163769 164016  248  0  2  113   81   119 0.577   9.96
 7.04 Term + 164089 164391  303  0  0  -25   48   386 0.607  17.49
 7.05 PlyA + 164414 164419    6                               1.05

 8.04 PlyA - 165087 165082    6                               1.05
 8.03 Term - 170614 170531   84  1  0   87   42   137 0.993   5.67
 8.02 Intr - 173110 172936  175  0  1   82   94   151 0.720  14.12
 8.01 Init - 174060 174020   41  0  2   22  103    68 0.598   1.41
 8.00 Prom - 178603 178564   40                              -7.55

 9.00 Prom + 185123 185162   40                              -4.45
 9.01 Init + 186939 186965   27  2  0   90   81    38 0.640   1.76
 9.02 Intr + 198111 198231  121  2  1   74   92    40 0.671   2.15
 9.03 Intr + 199319 199816  498  0  0   84   82   225 0.594  13.53

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  55994  55647  348  2  0   75   49   365 0.841  27.09
S.002 Term - 157193 157042  152  0  2   82   42   221 0.879  13.99


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:22718000_22922779|GENSCAN_predicted_peptide_1|345_aa
MIQHVAGENLSAYNSVGQVISGLQETWGPCRCPSETVVKRLSGNGESTGSTRQTSGTESK
VLTGRIPKGSLGRGQGSSQPPLSGLKQVKKVAEATRWQKGVTHSTWRRLEVTARNLRMAR
QFYNSRSQGEPEHRRTQMTGAFGPVAFSLGLLLVLPAAFPAPVPPGEDSKDVAAPHRQPL
TSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFN
EETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNLDAITTP
DPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM

>gi568815591r:22718000_22922779|GENSCAN_predicted_CDS_1|1038_bp
atgatccagcacgtggctggggaaaatctgagcgcatataattctgtaggacaagtaatt
tcagggctccaggagacctggggcccatgcaggtgccccagtgaaacagtggtgaagaga
ctcagtggcaatggggagagcactggcagcacaaggcaaacctctggcacagagagcaaa
gtcctcactgggaggattcccaaggggtcacttgggagagggcagggcagcagccaacct
cctctaagtgggctgaagcaggtgaagaaagtggcagaagccacgcggtggcaaaaagga
gtcacacactccacctggagacgccttgaagtaactgcacgaaatttgaggatggccagg
cagttctacaacagccgctcacagggagagccagaacacagaagaactcagatgactggc
gccttcggtccagttgccttctccctggggctgctcctggtgttgcctgctgccttccct
gccccagtacccccaggagaagattccaaagatgtagccgccccacacagacagccactc
acctcttcagaacgaattgacaaacaaattcggtacatcctcgacggcatctcagccctg
agaaaggagacatgtaacaagagtaacatgtgtgaaagcagcaaagaggcactggcagaa
aacaacctgaaccttccaaagatggctgaaaaagatggatgcttccaatctggattcaat
gaggagacttgcctggtgaaaatcatcactggtcttttggagtttgaggtatacctagag
tacctccagaacagatttgagagtagtgaggaacaagccagagctgtgcagatgagtaca
aaagtcctgatccagttcctgcagaaaaaggcaaagaatctagatgcaataaccacccct
gacccaaccacaaatgccagcctgctgacgaagctgcaggcacagaaccagtggctgcag
gacatgacaactcatctcattctgcgcagctttaaggagttcctgcagtccagcctgagg
gctcttcggcaaatgtag

>gi568815591r:22718000_22922779|GENSCAN_predicted_peptide_2|134_aa
MDKWDHVKLKSFRVAKDTINKVKRQPTEWEKISANYPSDKELVIRIYKELKQPCRKKKSN
KSIKIWAKDLNRHFSKEGIQMANRYMKRCSTSLIIREIVSPQSKLLICKRQTITNAGENV
EKRELLYAVGGNVN

>gi568815591r:22718000_22922779|GENSCAN_predicted_CDS_2|405_bp
atggacaaatgggatcacgtcaagttaaaaagcttccgcgtggcaaaggatacaatcaac
aaagtgaagagacaacccacagaatgggagaaaatatctgccaactacccatctgacaag
gaattagtaataagaatatacaaggagctcaaacaaccctgtaggaaaaaaaaatctaat
aaatcgatcaaaatatgggcaaaagatttgaatagacatttctcaaaagaaggcatacaa
atggcaaacaggtatatgaaaaggtgctcaacatcactgatcatcagagaaattgtctca
ccccagtcaaaactgcttatatgcaaaagacagacaataacaaatgctggcgagaatgta
gagaaaagggaactgttgtatgctgttggtgggaatgtaaattag

>gi568815591r:22718000_22922779|GENSCAN_predicted_peptide_3|157_aa
MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD
AYVLPKLCVKLHYCVSCVIHSKVVRNRSREARKDRTPPPRFRPAGAAARPPPKPITLTTP
NADKDVKQQELSFIVGGNAKFGGQLVISYKTKHTFTI

>gi568815591r:22718000_22922779|GENSCAN_predicted_CDS_3|474_bp
atgacaaagaaaagaaggaacaacgttcgtgccaaaaagggccgcggccacgtgcagcct
attcgctgcactaactgtgcccgatgcgtgcccaaggacaacgccattaagaaattcgtc
attcgaaacatagtggaggctgcagcagtcagggacatttctgaagcgagcgtcttcgat
gcctatgtgcttcccaagctgtgtgtgaagctacattactgtgtgagttgtgtaattcac
agcaaagtagtcaggaatcgatctcgtgaagcccgcaaggaccgaacacccccaccccga
tttagacctgcgggtgctgccgcacgtcccccaccaaagcccataacactgacaacacca
aatgctgacaaggatgtgaagcaacaagaactctccttcattgttggtggaaatgcaaaa
tttggaggacagttggtgatttcttacaaaactaaacatacttttaccatatga

>gi568815591r:22718000_22922779|GENSCAN_predicted_peptide_4|182_aa
MAERGQHRAQAMVSEGGSLKRWQLSCDVVPVSAQDLRECLDAQAEVCCRDGFLIWTASAR
AVQKGNVGWDPPHRVPTGAPPSRAVRRRPPSSRPQNDRSTGSLYHMPGKATDAQCQSMKA
AGREAVSCKATEAELPETMGTYLLHQRDPDVRHGVKGDHFGPLRFDCPAGFRTCVGPVAP
LF

>gi568815591r:22718000_22922779|GENSCAN_predicted_CDS_4|549_bp
atggctgaaaggggccaacatagagctcaggccatggtttcagagggtggaagcctcaag
cgttggcagctttcatgtgatgttgtgcctgtgagtgcacaagatctacgggaatgcctg
gatgcccaggcagaagtttgttgtagggatgggttcctcatatggacagcctctgctagg
gcagtgcagaagggaaatgtggggtgggatcccccacacagagtccctactggggcacca
cctagtcgggctgtgagaagaaggccaccatcctccagaccccagaatgatagatccact
ggcagcttgtaccacatgcctggaaaagccacagatgctcaatgccagtccatgaaagca
gctgggagggaggctgtatcctgcaaagccacagaggcagagctacccgagaccatggga
acctacctcttgcatcagcgtgacccggatgtgagacatggagtcaaaggagatcatttt
ggacctttaagatttgactgccctgctggatttcggacttgtgtggggcctgtagcccct
ttgttttga

>gi568815591r:22718000_22922779|GENSCAN_predicted_peptide_5|190_aa
MQVQPKICTRCNALSIPVQRTTKTASTILPEALKVMIEPKLHTKLNPQLLVLVRVEVEEV
KEQPGASQHSCATLAKKFLYGCFLTCKMGAVIEIIQTLHRTVTFPVLLPLTQLHHGDGRV
AQGGPLTATTASGIRKGKEGVFEQTNNFLLPGYSLELLSTPGKHMYEIKFLQRRDSSKSI
TGTPTKCKAL

>gi568815591r:22718000_22922779|GENSCAN_predicted_CDS_5|573_bp
atgcaggtccagcctaaaatttgtacaagatgcaatgctttgtcaattcctgtccaaagg
accaccaagacggccagcactatactccctgaagcactgaaagttatgattgaacctaaa
ttacacacaaagttaaatccgcagttgctggttttagtgagagttgaggtggaggaagta
aaagaacaacctggagccagtcagcatagctgtgcgaccttggcaaaaaagtttctctac
ggctgtttcctcacctgtaaaatgggggcagtaatagaaatcatccaaacccttcatcgt
acagtcactttcccggttcttctcccactgacccagcttcaccatggcgacggccgtgtg
gcgcagggaggaccccttacagcaaccacagcgtcgggaatccgaaagggaaaggagggt
gtttttgagcagacaaacaatttcttattgccaggatacagcctggaactcttaagcaca
ccaggcaagcatatgtatgaaataaaatttctacaaagaagagattcgtcaaaaagcatc
actgggacaccaaccaagtgtaaggctctgtga

>gi568815591r:22718000_22922779|GENSCAN_predicted_peptide_6|245_aa
MVDGGPDQDIHVEATAGWLEQPGTKRLAGALQRQTLEDKAHYLQIILQSRAKCGDQDRGN
QEAFTGPEVDLRENLEAQLAEKPIRQSEAGNSSNYVAEDWLPLKDVNISGGRGCKLIEEG
LKHGEDSWCLECCMLRMMATARKYLAPKARLCHWTIICSRTGVPNPQAADWYQSEACQEP
GSTAGGERWKRKRYQRPFSLPGTHEQRKDHVRHCEKAAAHTPGRESSPATIPAGTLILDL
ELSEL

>gi568815591r:22718000_22922779|GENSCAN_predicted_CDS_6|738_bp
atggtggatgggggacctgatcaggacatccatgtggaagccacagcagggtggctggag
cagcctggaacaaaacgcctggctggtgctctgcaaaggcagacactggaggacaaagca
cattatctccagataattcttcagtccagagctaagtgcggggatcaggacagaggcaac
caggaggcctttacagggccagaggtggatctcagggagaatctagaagctcagctggct
gaaaaaccaatcaggcagtcagaagctgggaactcgtctaattacgtagcagaagactgg
ctcccgttaaaggatgtgaacattagcggaggtcgggggtgcaaactcatcgaagagggg
ttgaagcacggggaggactcctggtgcctggagtgctgcatgcttagaatgatggccacg
gcccgcaaatatcttgcccccaaagcacgtctgtgtcattggactattatttgctctagg
acaggggtccccaacccccaggctgcagactggtatcagtccgaggcctgtcaggaaccg
ggcagcacagcaggaggcgaacgatggaagaggaagagataccagaggcccttctctctc
cccggcacacatgaacagaggaaagaccatgtgaggcactgcgagaaggcagctgcccat
actccaggaagagagtcctcaccagcaaccatccctgctggtaccttgatcttggacttg
gagctttcagaactgtga

>gi568815591r:22718000_22922779|GENSCAN_predicted_peptide_7|267_aa
MNDTWLMAEFRQQLFGADQEQRQLIRGSVPRAVPLTNQLASVVTRQLTIQSLWMVTVSAV
PARFAKATRVVTSAQQATYRRRGKGLTNKLLFQESLQKTATRLSAFSWEEAKVQLSWVVL
NLATSAMLPKFYPNEIKVTYLRCTGDEVGATSVLAPKISPLGLSSEKNREAQIEVVTSAS
ALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNVAQHMWHRSLARELSGIIKEILGTPQS
VGCNVDGCHPHDIIDDINGGAVECPAN

>gi568815591r:22718000_22922779|GENSCAN_predicted_CDS_7|804_bp
atgaacgacacatggttgatggcagagttcagacaacaattatttggagcagaccaggag
caaagacagctgattagaggatcagtacccagggcggtaccactcaccaaccagctggcc
tctgttgtcacccgtcagctcacgatccagtccctctggatggtgacggtcagcgccgtg
ccggccaggtttgccaaggccactagggtggtcaccagtgcacagcaggccacctaccga
aggaggggaaagggtcttacaaacaagctgttattccaagaatctcttcaaaaaacagca
acaaggctttcagctttcagctgggaggaggccaaggtgcaactttcttgggtcgtcctg
aatctagccacctctgccatgctgccgaagttctaccccaatgagatcaaagtcacatac
ctaaggtgtactggggatgaagtgggtgccacgtctgtgttggcccccaagatcagcccc
ctaggtctgtcttcagaaaagaacagagaggcccagattgaggtggtgacttctgcctct
gccctgatcatcaaagccctcaaggaaccgccaagagacagaaagaaacagaaaaacatt
aaacacagtggaaatatcacttttgatgagattgtcaatgttgctcaacacatgtggcac
cgatctttagccagagaactctctggaatcattaaagagatcctggggactccccagtct
gtgggctgcaatgttgatggctgccaccctcatgatatcatagatgacatcaacggtggt
gctgtggaatgcccagctaattaa

>gi568815591r:22718000_22922779|GENSCAN_predicted_peptide_8|99_aa
MSVLDLKGVDGIKCSGPGKYSKRGVSFSNAWLCLPCGCPEMGWWNSKRSLASLQDSGAAE
PSSYHDYSAFQQHVVMVGELNDTENSGNEEKQTKATGTG

>gi568815591r:22718000_22922779|GENSCAN_predicted_CDS_8|300_bp
atgtcagttttggaccttaaaggtgtggacggcataaagtgctcaggacctggtaaatac
agcaaacggggagtgagtttctcaaatgcctggctgtgtctgccctgtggctgccccgag
atggggtggtggaatagcaagaggagccttgccagcctgcaggactcaggtgctgctgag
ccctccagttaccacgactacagcgctttccagcagcatgtagtaatggtgggagaacta
aatgacactgaaaattctggaaatgaggagaaacagactaaagccacgggcaccggatga

>gi568815591r:22718000_22922779|GENSCAN_predicted_peptide_9|216_aa
MVLASTRLLHALKGLKPVIARLLQHGLLKPINSPYNSPILPSKNRTSLTGYTLLARLLES
LISFPSWKSILKEITSQCSICYSTTPEGLFRPPLFPTHQARGFAPVQDWQIDFTHMPRVR
KLKYLLVWVDTFTGWVEAFPTGPEKATVVISSLPSDIIPGFGLPTSIIQSDNGLAFISQI
AQAVSQALGIQWLLVLPQTTTLKSLLKWIKDLQWQX

>gi568815591r:22718000_22922779|GENSCAN_predicted_CDS_9|648_bp
atggtgctggcatccacaagactcctgcatgctttaaaaggattaaagcctgttatcgct
cgcctgttacagcatggccttttaaagcctataaactctccttacaattcccccatttta
ccatccaaaaaccggacaagtcttacaggttacacgctgctagcccgcctcttagaatct
ctcatttcctttccatcgtggaaatctattctcaaggaaataacttctcagtgttccatc
tgctattctacgactcctgagggattgttcaggccccctctcttccctacacatcaagct
cggggatttgcccctgtccaggactggcaaattgactttactcacatgccccgagtcagg
aaactaaaatacctcttggtctgggtagacactttcactggatgggtagaggcctttccc
acagggcctgaaaaggccactgtggtcatttcttcccttccgtcagacataattcctggg
tttggccttcccacctctataatacagtctgataacggattggcctttattagtcaaatc
gcccaagcagtttctcaggctcttggtattcagtggctcctggttttacctcaaaccacc
acccttaagtctctcttaaagtggataaaagatcttcagtggcaagnn