GENSCAN 1.0	Date run:  7-Nov-116	Time: 23:24:40

Sequence gi568815592r:166829591_167056182 : 226592 bp : 43.96% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1615   1892  278  2  2  150   59    49 0.489   5.44
 1.02 Term +   7344   7454  111  2  0   97   53    79 0.731   3.86
 1.03 PlyA +   8323   8328    6                               1.05

 2.00 Prom +   9980  10019   40                              -5.66
 2.01 Init +  12770  12932  163  1  1   90   89    62 0.590   6.39
 2.02 Term +  13105  13466  362  2  2   51   53   201 0.247   7.60
 2.03 PlyA +  14420  14425    6                               1.05

 3.00 Prom +  15536  15575   40                              -4.56
 3.01 Init +  16458  16619  162  2  0   45   36   125 0.208   2.73
 3.02 Intr +  21630  21806  177  2  0   20   55   121 0.459   2.12
 3.03 Intr +  23046  23168  123  2  0   84   67   130 0.989  11.28
 3.04 Term +  25744  25929  186  0  0   20   48   538 0.931  40.49
 3.05 PlyA +  26491  26496    6                               1.05

 4.06 PlyA -  27476  27471    6                               1.05
 4.05 Term -  29469  29338  132  0  0   69   45   152 0.192   7.09
 4.04 Intr -  31145  30988  158  0  2   41   75    48 0.101  -1.47
 4.03 Intr -  32870  32518  353  1  2   85  105   171 0.170  13.47
 4.02 Intr -  33103  33020   84  0  0  104   45    38 0.199   0.04
 4.01 Init -  39023  38962   62  2  2   67   64    30 0.544  -0.78
 4.00 Prom -  39428  39389   40                              -3.86

 5.00 Prom +  50841  50880   40                              -1.96
 5.01 Init +  54836  54941  106  1  1   78   -3   113 0.244   1.58
 5.02 Intr +  58488  58788  301  1  1  -17   72   227 0.478   6.39
 5.03 Intr +  61839  62042  204  0  0   41   35   133 0.360   1.62
 5.04 Intr +  65213  65397  185  2  2   42   23   141 0.332   2.43
 5.05 Intr +  67163  67437  275  0  2   68   61   197 0.675  12.26
 5.06 Intr +  71961  72183  223  2  1  -38  111   158 0.830   3.20
 5.07 Intr +  74025  74194  170  1  2  111   29    88 0.320   4.87
 5.08 Intr +  74588  74791  204  1  0   74   20   123 0.336   3.50
 5.09 Intr +  79388  79468   81  1  0  133   23    35 0.130   1.33
 5.10 Intr +  93135  93264  130  2  1  100   81    53 0.634   6.07
 5.11 Term +  95991  96151  161  1  2   56   43   116 0.672   2.00
 5.12 PlyA +  97910  97915    6                               1.05

 6.00 Prom +  97940  97979   40                              -3.06
 6.01 Sngl +  99509  99685  177  1  0   79   41   127 0.234   2.05
 6.02 PlyA +  99903  99908    6                               1.05

 7.09 PlyA -  99934  99929    6                              -0.45
 7.08 Term - 100201  99998  204  1  0   73   44   185 0.985   9.97
 7.07 Intr - 103309 103140  170  2  2   58   80    84 0.612   4.27
 7.06 Intr - 103679 103585   95  1  2   32   64    93 0.427   0.91
 7.05 Intr - 109418 109305  114  1  0   61   94   152 0.906  12.66
 7.04 Intr - 113499 113429   71  0  2   58  119    47 0.133   2.78
 7.03 Intr - 116757 116713   45  0  0   88   62    50 0.071   1.01
 7.02 Intr - 121122 121020  103  2  1   74   58    26 0.065  -1.62
 7.01 Init - 126592 126507   86  1  2  101  101   246 0.721  25.49
 7.00 Prom - 153729 153690   40                              -1.86

 8.00 Prom + 167921 167960   40                              -5.16
 8.01 Init + 169823 169924  102  1  0   99  100   281 0.426  30.64
 8.02 Intr + 173603 173657   55  1  1  108  107     8 0.521   3.25
 8.03 Intr + 185862 185926   65  1  2   69   78    48 0.164   0.34
 8.04 Intr + 192819 193045  227  2  2  111   59   174 0.797  13.58
 8.05 Intr + 195192 195304  113  0  2   66   89    38 0.707   1.72
 8.06 Intr + 196957 197025   69  2  0  127   59     3 0.347   0.45
 8.07 Intr + 203013 203052   40  1  1   46   82    66 0.272  -0.92
 8.08 Intr + 204285 204381   97  0  1   27   86   127 0.309   6.41
 8.09 Intr + 216331 216463  133  0  1   71  131    36 0.201   6.42
 8.10 Intr + 217118 217199   82  0  1   79   90    40 0.415   2.00
 8.11 Intr + 220631 220725   95  2  2   56   74    50 0.069   0.01
 8.12 Term + 224650 224684   35  2  2  116   36    13 0.063  -3.35
 8.13 PlyA + 225764 225769    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 130038 130159  122  1  2   58   50   106 0.846   2.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:166829591_167056182|GENSCAN_predicted_peptide_1|129_aa
XVGPAHLTKLAQRQVPQRLLHASRTGGLTRDPFSDPYPPCHLSSAQVHSGSVAMMTMELL
YFNLNLPFLQPLCVFLHQHDTFPPAPARQKASACAPSSVPLGHLQLSFSWDLGPGPAQRD
FQYPLHPQR

>gi568815592r:166829591_167056182|GENSCAN_predicted_CDS_1|390_bp
ngtgttggtcctgcgcacctcactaaacttgctcagaggcaggttcctcagaggctgctc
cacgcatccaggaccggaggcctcaccagggatcccttctcagatccttaccctccctgc
catctctcttctgctcaggtccacagtgggtccgtggccatgatgactatggagcttctc
tacttcaacttgaatttgcccttccttcaaccactctgtgtatttctacaccagcatgac
accttcccccctgcccctgccagacagaaagcttcagcttgtgccccgtcttcagtcccg
ctcgggcacctgcagctgagcttctcttgggacctgggacctggcccagcacagcgggat
ttccagtacccgctgcaccctcagcgctga

>gi568815592r:166829591_167056182|GENSCAN_predicted_peptide_2|174_aa
MEVETGERIPPAKEHQRSPAKHRGQGEVGTNSPKESPAAASPVDAVITDFQLQNAPCFLA
QYPELLILKIQTGKMEIKMVDRRQDWLAAPAGTDKAACGETHIVNFCSKNYHSNIPGKPR
ESTDPLKELYRCCRLHETLKNRESACLLSGEGKFSAQVTGCLEIDSVLLGAQWE

>gi568815592r:166829591_167056182|GENSCAN_predicted_CDS_2|525_bp
atggaggtggagactggagagagaatcccaccagccaaggaacaccagaggtcaccagca
aagcacagaggacagggagaggttgggacaaattctcccaaagagtccccagcagcagcc
agccctgtggatgctgtgatcacagacttccagctccagaacgctccgtgcttcttagcc
caatacccagagttacttatcttaaaaatacagacagggaaaatggagattaagatggtg
gataggaggcaggactggcttgcagctcctgctggaacagacaaagcagcatgtggagag
acccacatcgtgaacttttgttccaagaactaccacagcaacataccaggaaagcctaga
gaatccacggaccctttgaaggaactttatcgctgctgcaggctccatgagacgctgaaa
aaccgtgagtctgcctgccttctcagtggggagggcaagttctcagcccaggtcaccggc
tgcctagaaatagactcggtgctgttgggggcacagtgggagtga

>gi568815592r:166829591_167056182|GENSCAN_predicted_peptide_3|215_aa
MQKIFQGYYEHIYEHKLENLEEMDKFLKIYNPPRLNQEDIETLNRPITSSKIEVAGGEPR
HQSSGAQTWEALQTPKLDLIAFSNLLLRTLDTEKTELSLGLLLHDLATTSTQKGTRRGVQ
AATARQLRELGIGGGHADTLRSSSLSAHRPLDVPTKKTKKTKMKMKKKEKKKKEKEEEEE
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE

>gi568815592r:166829591_167056182|GENSCAN_predicted_CDS_3|648_bp
atgcaaaagatttttcaaggctactatgaacacatttatgagcataaactagaaaatcta
gaggagatggataaattcctcaaaatatacaaccctcctagattaaaccaggaagatata
gaaactctgaacagaccaataacaagcagcaagattgaagtggcaggaggagagccacgc
caccagtcctcaggggctcagacctgggaggccttacagacacccaaactggatctcatc
gccttctccaacctgctgctccgcacactagacacagagaaaacggagctttctttgggt
cttttgcttcatgatttagcaacgacctcaacgcagaaggggactcgtcgaggggtccaa
gcagcaacggctcggcaactccgggagctgggcattggaggaggccacgctgacacgctc
aggagctcatccctgagcgcccacaggcccctggatgtccctacgaagaagacgaagaag
acaaagatgaagatgaagaagaaggaaaagaagaaaaaggagaaggaggaggaggaagag
gaggaggaagaagaagaggaagaagaggaagaagaagaggaagaagaagaggaagaggaa
gaggaagaagaagaagaggaagaagaagaggaagaagaagaagaataa

>gi568815592r:166829591_167056182|GENSCAN_predicted_peptide_4|262_aa
MAIFAHMNSSGIYDAKIFQVSPWLLCSFYGSGILRLNFHPRLEPIKVKYPSGKRQQLPRA
LAWQGGDGARAAILQPPGSLLRPAQAPRSRPPLGAGSVLSIAATRRPLRPLASDIPSGRP
PVPVRASVYFLSYYQYSTSRKGKFKNANRTVAGTMEKDRGGAYGNRVLPIAQLVIVSTLA
CAEAVRCSALTNEGLVQREDSALGSERMGERGPGALQFQLVLMAGWCSSVELSRVCCMAA
GADGWLVFFRGALPCLLHGSRC

>gi568815592r:166829591_167056182|GENSCAN_predicted_CDS_4|789_bp
atggccatctttgctcacatgaattccagtggtatatatgatgccaagatctttcaggtg
agcccttggttgctatgcagtttctatggcagcggcatcctcagactcaactttcaccct
cgtttagagccaattaaggtaaaatacccgagcgggaagcggcagcagctccccagagcc
ctggcttggcagggaggggacggcgcccgagcagccatattgcagccccccgggtccctc
ctccggccggcgcaggccccgcgctcacgacctcctctgggagccggatctgtcctctcc
atcgccgccacccgccggcctctgcgtcccttggcttccgacatcccgtctggccgtccc
cctgtgccggtccgagcctctgtttatttcctttcctactatcaatactcgaccagcaga
aaaggaaagtttaaaaatgccaatcgcacagttgctggaactatggaaaaagatcgaggt
ggagcctatggaaatagagtgcttcctatagcccagctggtcatcgtcagcacattggct
tgtgctgaagctgtaaggtgctcagccctcacgaatgaagggcttgtccagagggaggat
tccgccctgggctcagaaaggatgggagagagggggccaggggctttacaattccagctg
gtgctgatggctggctggtgttcttccgtggagctctcccgtgtctgctgcatggcagcc
ggtgctgatggctggctggtgttcttccgtggagctctcccgtgtctgctgcatggcagc
cggtgctga

>gi568815592r:166829591_167056182|GENSCAN_predicted_peptide_5|679_aa
MGILNFYLVNQKFRKPSTCDWHLKWGEADRAFELWARLIKKKRDAIKNDKEDIIANPIEI
QTTIREYYKHLYANKLENLEEMDKFRDTYTLPRLNQEEVESLNRPITGSEIEAIINSLPT
KKSPGPDGFTAEFYQRAITLTTWPKIPFLGIRETKNPRSENTRLATILEAAHRHFGSSQP
PPWELCEQGPPGNILVTMKGPPKWQVDFGGSGKGKAGKIECLTGLASSAVYKHTLKKIIQ
VEISCLLVHHYVKGITRRPTAPGDEDNEEKIEHNCQQVIPQTCAARGDLLEVPLTDPNLN
LYTDGSSLVEKGLRKVGYAVVSDNRILESNPLTPGTSAQLAELIALTRALELGEGKRGRE
RRENTEGGKCQVNAQGGKRLVNAQRRKPGERTSSRTPSERTRGECCANTHGKHNRASTQW
GERHANAQQEERFALAAQQCPSAKGSRMLFSSSLPATAMGSRIPAGTPPHPRNVNTSGIR
IGRCDPGTGGPPQPGSSHFTACSSLLGPGNMQTLSSKTAQDPTFAFLNSSQGTPMLRAEA
HAGGTPASGQLWVNFRGVRFQWNEELTVEDGRGLAGHVSTEGEVKYFQNTYYAQVAVFST
GAARAAHISGCSPRHMVIKTEEQMVTVLTYATLSASTLYGPPLCHPAGIFYVTQQELEEK
RPWSLGVEAQSHPGLQKNS

>gi568815592r:166829591_167056182|GENSCAN_predicted_CDS_5|2040_bp
atgggaatcctcaatttctacctggtcaatcagaagttcaggaagccctcaacctgtgac
tggcatctgaagtggggggaagcggatcgagcctttgagctgtgggcaagactaataaag
aagaaaagagatgcaataaaaaatgataaagaggatatcatcgccaatcccatagaaata
caaactaccatcagagaatactacaaacacctctatgcaaataaactagaaaatctagaa
gaaatggataaattccgcgacacatacaccctcccaagactaaaccaggaagaagttgaa
tccctgaatagaccaataacaggctctgaaattgaggcaataattaatagcctaccaacc
aaaaaaagtccaggaccagatggattcacagccgaattctaccagagagctataacactc
accacatggcccaagattccattccttggaatccgtgagaccaagaaccccaggtcagag
aacacgaggcttgcaaccatcttggaagcagcccaccgccattttggaagcagccagcca
ccaccttgggagctctgtgagcaaggaccccctggtaacattttggtgaccatgaaggga
cctccaaagtggcaagtggactttggaggctctggaaaaggaaaagctgggaaaatcgaa
tgcctaacagggcttgcttccagtgcggtctacaagcacacgttaaaaaagatcatccaa
gtagaaataagctgcctcctcgtccaccattatgtcaagggaatcactagaaggcccact
gccccaggggatgaagacaatgaagaaaagatagaacataactgtcaacaagtaattcct
caaacctgtgctgctcgaggggaccttttagaggttcccttgactgatcccaacctcaac
ttgtatactgatggaagttcccttgtagaaaaaggacttcgaaaagtgggctatgcggtg
gtcagtgataacagaatacttgaaagtaatcccctcactccaggaactagtgctcagctg
gcagaactaatagccctcactcgggcactagaattgggagaaggaaaaagggggagagaa
cgccgggagaacacagagggaggaaaatgccaggtgaacgcacaagggggaaaacgcctg
gtgaacgcacaaaggagaaagccaggtgaacgcacaagcagcagaacgccaagtgaacgc
acgaggggagaatgctgcgccaacacacacgggaaacacaaccgcgcgagcacgcagtgg
ggagaacggcacgcgaacgctcagcaagaagaacgctttgccttggcagcgcagcagtgc
ccctctgcaaaggggtctcgcatgctgttcagcagctctcttcccgccacagcgatgggc
agccggatcccagctggaactccgccacatcccaggaatgtgaataccagtggaatccgg
ataggacggtgtgacccaggcacaggtgggccaccccaacccggctcctcacacttcacg
gcatgcagcagcctcctgggccctgggaacatgcagactctgagcagcaagactgcgcag
gacccgacatttgcatttctaaacagctcccaggggacgccaatgctgcgggctgaggcc
cacgctggaggaacaccggccagtgggcagctttgggtgaacttcagaggtgttaggttc
cagtggaatgaggaactgacagtggaggatggcagaggcctggcagggcatgtcagcact
gagggggaggttaaatattttcaaaacacctactatgctcaagtagctgtgttcagtact
ggggcagcacgagcagcccacatctcagggtgcagtccaagacatatggtcatcaagaca
gaagagcagatggtgacagtcctcacctatgccacattgtccgcatctacactgtacggc
cctcccctgtgccatccagctggcatcttctatgtaacacaacaagagctggaagagaag
aggccctggtccctgggcgtggaggcgcagagccacccaggactgcaaaagaactcttaa

>gi568815592r:166829591_167056182|GENSCAN_predicted_peptide_6|58_aa
MSWGSGHMEQTQSELETPPRPTRHQRGLLPCVELFVLTGSLRQEGNRLRGENSSKRVP

>gi568815592r:166829591_167056182|GENSCAN_predicted_CDS_6|177_bp
atgtcctggggctctggtcacatggaacagacccagtctgagctagagacaccccccagg
cccaccaggcatcagcgtgggctcctgccatgcgtggagctcttcgtcttgacagggtcc
ctgcgccaagaaggcaacaggctccgaggggaaaactcgagcaagagagtcccctga

>gi568815592r:166829591_167056182|GENSCAN_predicted_peptide_7|295_aa
MRPAALRGALLGCLCLALLCLGGADKRLRASVSRPFSLEHPEPGHCLDLHLRAYPARCVK
LTLAPGLLGQMTDVGIWSDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALN
SQKKYFGRSLELYRELDLNSCSRDRCVIHKSRDIYDVDLYGKCLQTLALEKGSRKMIACR
ALTVLTWTHVRIDEGHVPAMFAQSSVFRELITGVAKATGATHLLSCFQDEEVQTIGQIEL
CLTKQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKH

>gi568815592r:166829591_167056182|GENSCAN_predicted_CDS_7|888_bp
atgcgccctgcagccctgcgcggggccctgctgggctgcctctgcctggcgttgctttgc
ctgggcggtgcggacaagcgcctgcgtgcgtcagtgtccaggcccttctcattggagcac
ccagagccaggacactgcctggatctgcacctcagggcgtaccctgctcggtgtgtcaag
ctgaccctggccccaggacttctgggtcagatgaccgacgtgggaatctggtcggatctt
ttgccagaaatgagggcatactggcctgacgtaattcactcgtttcccaatcgcagccgc
ttctggaagcatgagtgggaaaagcatgggacctgcgccgcccaggtggatgcgctcaac
tcccagaagaagtactttggcagaagcctggaactctacagggagctggacctcaacagc
tgcagtagggaccgatgtgtcatccacaaatcccgggatatttacgacgtggacctttac
ggaaaatgtttgcagactcttgccttagagaaaggaagccgtaagatgatcgcttgcagg
gccctcaccgtcctcacctggactcatgtgcgaatagatgagggacatgtgcctgccatg
tttgcccagagctcggtgttcagggaactgattacaggggtggcaaaagccacaggggcc
acacatttgctgagctgcttccaggatgaggaagtacagacaattggtcagatagaactg
tgcctcactaagcaagaccagcagctgcaaaactgcaccgagccgggggagcagccgtcc
cccaagcaggaagtctggctggcaaatggggccgccgagagccggggtctgagagtctgt
gaagatggcccagtcttctatcccccacctaaaaagaccaagcattga

>gi568815592r:166829591_167056182|GENSCAN_predicted_peptide_8|370_aa
MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKNKTPLVNESLKKFLNTKDDAMLHVVV
EVVHSKTPDGAIRMKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGKD
KAGLCPDEDDMEGDSFFDDPIPKPEKTYGLRKEPRKQAGSLASLSDAPPLKSGLSSLAGA
PSLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEISIGEEI
EEDLSVEIDDINTSDKHPYCPCASPAPAPLLPQCQAFSSSSHGFIPAAGIAPPRGSALPA
GMASTVETYVTKARPSQGAPSNDHSASGLSCHTVKKVPCFSFAFCHECKFHEASPAMLNC
RYLNQIIYIK

>gi568815592r:166829591_167056182|GENSCAN_predicted_CDS_8|1113_bp
atggcggcgacggcggccgcagtggtggccgaggaggacacggagctgcgggacctgctg
gtgcagacgctggagaacagcggggtcctgaaccgcatcaagaacaaaactcctttagtt
aatgagagcctgaaaaagtttttaaataccaaagacgatgctatgttgcatgtggtggtt
gaggttgtacacagcaagactccagatggagccatccgcatgaaggccaatgatgaggcc
aatcagagtgatacaagtgtctccttgtcagaacccaagagcaaaagcagccttcactta
ctgtcccatgaaacaaaaattggatcttttctaagcaacagaactttagatggcaaagac
aaagctggcctttgtccagatgaagatgatatggaaggagattctttctttgatgatccc
attcctaagccagagaaaacttacggtttgaggaaggaacctaggaagcaagcaggaagt
ctggcctcgctctcggatgcaccccccttaaaaagtggactcagctccctggcgggagcc
ccttctttaaaagactctgagagtaaaaggggaaatacagttttgaaagatctgaaattg
atcagtgataaaattggatcacttggattaggaactggagaagatgatgactatgttgat
gattttaatagtaccagccatcgctcagagaaaagtgagataagtattggtgaagagata
gaagaagacctttctgtggaaatagatgacatcaataccagtgataagcacccctactgc
ccatgcgcctctcctgccccagcacccctactgccccagtgccaggccttttctagcagc
tctcatgggttcatccctgctgcgggcattgctccaccaaggggcagtgctctccctgcc
gggatggcctccactgtagagacctatgtcaccaaggccaggccctctcagggggctcca
tccaacgaccattctgcctcagggctgtcctgccacactgtgaagaaggtgccttgcttc
tcctttgccttctgccatgagtgtaagtttcatgaggcctccccagccatgctgaactgt
aggtatttaaatcagatcatctacataaaataa