GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:30:47

Sequence gi568815592f:109879113_110080198 : 201086 bp : 43.04% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   6101   6213  113  0  2   47   55   196 0.977  10.92
 1.02 PlyA +   6765   6770    6                              -0.45

 2.03 PlyA -  10500  10495    6                               1.05
 2.02 Term -  11733  11591  143  1  2   54   43   151 0.963   5.29
 2.01 Init -  13369  13033  337  1  1   80    8   228 0.250  11.44
 2.00 Prom -  15270  15231   40                               0.74

 3.07 PlyA -  16622  16617    6                               1.05
 3.06 Term -  36923  36803  121  1  1    5   41   310 0.318  15.95
 3.05 Intr -  47107  47079   29  1  2  118   67   -25 0.003  -4.69
 3.04 Intr -  60550  60462   89  2  2   50   91    73 0.363   3.49
 3.03 Intr -  62111  61955  157  2  1   74   78    63 0.303   3.48
 3.02 Intr -  68226  68177   50  1  2   88   55    53 0.112   0.40
 3.01 Init -  69708  69666   43  0  1   58   92    65 0.827   2.51
 3.00 Prom -  71294  71255   40                              -1.66

 4.00 Prom +  75506  75545   40                              -5.66
 4.01 Init +  83234  83243   10  1  1   94   96     4 0.348   2.51
 4.02 Intr +  93697  93834  138  2  0   59   64    50 0.031   0.14
 4.03 Intr +  99153  99355  203  1  2  107  109    49 0.675   7.90
 4.04 Term +  99983 101089 1107  1  0  107   49  1683 0.985 158.37
 4.05 PlyA + 101585 101590    6                               1.05

 5.05 PlyA - 101900 101895    6                               1.05
 5.04 Term - 113043 113030   14  1  2  151   38    -4 0.058  -0.74
 5.03 Intr - 116792 116759   34  2  1  108   80    38 0.040   2.80
 5.02 Intr - 134430 134289  142  2  1  -20   86   112 0.086   0.56
 5.01 Init - 142201 142149   53  1  2   89   94    43 0.506   5.64
 5.00 Prom - 158289 158250   40                              -4.06

 6.00 Prom + 160567 160606   40                              -5.86
 6.01 Init + 160699 160812  114  0  0   74  100    38 0.765   3.81
 6.02 Intr + 160850 160971  122  1  2   94   94    97 0.765  10.19
 6.03 Term + 180949 180967   19  1  1  145   42    19 0.106   0.79
 6.04 PlyA + 187142 187147    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:109879113_110080198|GENSCAN_predicted_peptide_1|37_aa
XALAADLKAYTPPDDNCTLLQYVDDLLLTAPIRKDCY

>gi568815592f:109879113_110080198|GENSCAN_predicted_CDS_1|114_bp
naggcattggctgctgacctcaaggcctacaccccaccggacgacaactgcaccttgcta
caatatgtggatgacctccttttgacagccccaatacgcaaggactgctactga

>gi568815592f:109879113_110080198|GENSCAN_predicted_peptide_2|159_aa
MGKISEVLQGTDESPSQFYERLCEVFQLYTPFDPEATENQCMVNAAFAGQTQGDIRQKLQ
KLESFTGMNATQLLEVVTKVYVNCDEEAKREADQRLRKKADLLAAALMERGTKALAADLK
AYTPPDDNCTLLQYVDDLLLMAPTRKDCYWGTQGLPHLL

>gi568815592f:109879113_110080198|GENSCAN_predicted_CDS_2|480_bp
atggggaaaatctcggaagtgcttcagggaactgatgaaagccctagccagttttatgag
agactctgtgaggtgttccagctctacactccgtttgatcctgaggctactgagaatcag
tgcatggtgaatgcagcatttgcaggacaaacccagggggacatcaggcagaaactacaa
aagctagaaagtttcacaggcatgaatgccacccaacttttggaagtggtcaccaaggtg
tatgttaactgtgacgaggaggcaaaaagggaagcagatcagagactcaggaagaaagct
gatctgctagcagcagcactcatggaaagaggaacaaaggcattggctgccgacctcaag
gcctacaccccaccagatgacaactgcaccttgctacaatatgtggatgacctccttttg
atggccccaacccggaaggactgctactggggaacccaaggcctcccccacctcctatag

>gi568815592f:109879113_110080198|GENSCAN_predicted_peptide_3|162_aa
MALQSMPCLLFLGMAMSATKLHSQQPAISLARYPPSVSPGPGPKNGCEEDFQESKELTNL
FLLLAALSGSEETTHQQAEGLGRGRCKTYFKHQSDMISFGNCLKGCDSRQRGQALPTVSP
ASRVRQKKKKKKEEEEEEEEEEEEEEEEEEEEEEDNKVCCIN

>gi568815592f:109879113_110080198|GENSCAN_predicted_CDS_3|489_bp
atggccctgcagagcatgccctgcctcctgtttctagggatggctatgtctgctaccaaa
ctccacagccaacagccagccatcagcctggcacggtaccccccttctgtcagccctggc
cctggccccaagaatggctgtgaagaagatttccaggaatctaaagaattaactaacctt
tttctgctccttgcagcactttctgggtccgaagagacaacccaccaacaggcggagggt
ttagggagagggagatgtaaaacgtattttaaacaccagagtgacatgatcagcttcggc
aactgtttgaaagggtgtgacagccggcagagaggccaggctctccccactgtgtctcct
gcctcgagagtgagacagaagaagaagaagaagaaagaagaagaagaagaagaagaggaa
gaggaagaggaagaggaagaagaagaagaagaagaagaagaagacaataaggtttgctgc
atcaattga

>gi568815592f:109879113_110080198|GENSCAN_predicted_peptide_4|485_aa
MGQDRDRKRGKPATGGLMAMPGKGEGEDHPVLSINSSRTCHGPWQMAALTRAARSRLFCH
QLYLSLAEPAQRQAPRACLLPGPAASCRQLLCLRGELSPAPRLGAHDQRLPEVLTPQGAN
PAAMNASAASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAALGAGGGANGSLELS
SQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATA
DLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYY
SRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMV
FGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAI
YCVVGSHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSR
SPSEV

>gi568815592f:109879113_110080198|GENSCAN_predicted_CDS_4|1458_bp
atggggcaggacagggacagaaagagaggcaaacctgctactgggggcctgatggccatg
ccagggaagggtgagggagaggaccatcctgttctttccatcaacagctccaggacctgt
catggtccctggcaaatggcagcccttacgcgcgccgctcgcagccgccttttctgccac
caactgtatctctcactcgcggagccggcacagcgacaggcgccccgcgcttgcctcctc
cccggcccggccgcctcctgcaggcagctgctctgtttgcgcggggagctcagcccggcg
ccccgcctcggcgcccatgaccagcgacttccagaagtcctgacgccccagggtgcaaat
ccggccgcgatgaacgcgagcgccgcctcgctcaacgactcccaggtggtggtagtggcg
gccgaaggagcggcggcggcggccacagcagcaggggggccggacacgggcgaatgggga
ccccctgctgcggcggctctaggagccggcggcggagctaatgggtctctggagctgtcc
tcgcagctgtcggctgggccaccgggactcctgctgccagcggtgaatccgtgggacgtg
ctcctgtgcgtgtcggggacagtgatcgctggagaaaacgcgctggtggtggcgctcatc
gcgtccactccggcgctgcgcacgcccatgttcgtgctggtaggcagcctggccaccgct
gacctgttggcgggctgtggcctcatcttgcactttgtgttccagtacttggtgccctcg
gagactgtgagtctgctcacggtgggcttcctcgtggcctccttcgccgcctctgtcagc
agcctgctggccattacggtggaccgctacctgtccctgtataacgcgctcacctattac
tcgcgccggaccctgttgggcgtgcacctcctgcttgccgccacttggaccgtgtcccta
ggcctggggctgctgcccgtgctgggctggaactgcctggcagagcgcgccgcctgcagc
gtggtgcgcccgctggcgcgcagccacgtggctctgctctccgccgccttcttcatggtc
ttcggcatcatgctgcacctgtacgtgcgcatctgccaggtggtctggcgccacgcgcac
cagatcgcgctgcagcagcactgcctggcgccaccccatctcgctgccaccagaaagggt
gtgggtacactggctgtggtgctgggcactttcggcgccagctggctgcccttcgccatc
tattgcgtggtgggcagccatgaggacccggcggtctacacttacgccaccctgctgccc
gccacctacaactccatgatcaatcccatcatctatgccttccgcaaccaggagatccag
cgcgccctgtggctcctgctctgtggctgtttccagtccaaagtgccctttcgttccagg
tctcccagcgaggtctga

>gi568815592f:109879113_110080198|GENSCAN_predicted_peptide_5|80_aa
MVLKQCDKVVLWEGFLHSQGGEEIQRQRVEKEEEEEEEEDLSSGGRISLKTFSKSADRPC
GPQSWDFGEQVLFGYMSMEV

>gi568815592f:109879113_110080198|GENSCAN_predicted_CDS_5|243_bp
atggtgcttaagcaatgtgataaggtggtgctgtgggaaggcttcctgcacagccaaggt
ggggaagaaatccaaaggcagcgtgtcgagaaagaggaggaggaggaggaggaggaggat
ttgtcaagtggtggaaggatatctctgaagactttcagcaaatcagcagatcgaccatgt
ggcccccaaagctgggattttggggaacaggtgctgtttggttacatgagtatggaggtt
taa

>gi568815592f:109879113_110080198|GENSCAN_predicted_peptide_6|84_aa
MSFGEAHCHPYKESSQNGRCVSIHQSSLKPFPSVCGTKLPHNLTPLSKRQLILWTQLPLR
RAAAPLVKEKVEKEKEKLRYLMQM

>gi568815592f:109879113_110080198|GENSCAN_predicted_CDS_6|255_bp
atgagttttggggaagcacactgccacccatacaaggagtcttctcaaaatggacggtgt
gtcagcatccaccagtcctctctgaaaccctttccttcggtgtgtgggaccaagctccct
cataacctcacaccgctctccaagaggcagctgattctgtggacccaactgcctctccga
agagcagctgcgcccttggtaaaggagaaagtagaaaaggaaaaggagaagctcaggtat
ctgatgcagatgtag