GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:15:55

Sequence gi568815592r:107944788_108174651 : 229864 bp : 43.55% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1151   1146    6                               1.05
 1.02 Term -   9284   9190   95  0  2   83   49    40 0.411  -2.41
 1.01 Init -  13222  13099  124  1  1   96  117   219 0.817  25.93
 1.00 Prom -  27651  27612   40                              -4.66

 2.06 PlyA -  27893  27888    6                               1.05
 2.05 Term -  60472  59570  903  1  0    4   38  1455 0.996 124.43
 2.04 Intr -  60752  60515  238  1  1   55   -8   280 0.297  12.72
 2.03 Intr -  61120  61070   51  0  0   80   80    43 0.288   0.72
 2.02 Intr -  65188  65164   25  2  1   77   98     3 0.041  -2.72
 2.01 Init -  71585  71450  136  2  1   53   57   103 0.271   4.00
 2.00 Prom -  76982  76943   40                              -0.56

 3.02 PlyA -  77212  77207    6                               1.05
 3.01 Sngl -  87565  87197  369  1  0   88   49   116 0.812   3.97
 3.00 Prom -  89580  89541   40                              -2.96

 4.00 Prom +  89694  89733   40                              -5.36
 4.01 Init + 102566 102652   87  1  0   92  106    60 0.928   8.84
 4.02 Intr + 110759 110812   54  1  0   88   49    53 0.240   0.58
 4.03 Term + 113042 113056   15  1  0  120   44    -1 0.266  -3.06
 4.04 PlyA + 113118 113123    6                               1.05

 5.03 PlyA - 115450 115445    6                               1.05
 5.02 Term - 118856 118845   12  2  0  134   32     4 0.284  -2.40
 5.01 Init - 129864 129463  402  0  0   79   47   641 0.775  53.73
 5.00 Prom - 141620 141581   40                              -2.66

 6.05 PlyA - 141761 141756    6                               1.05
 6.04 Term - 155510 155480   31  1  1  114   34    47 0.124  -0.77
 6.03 Intr - 161749 161568  182  1  2   91   13   111 0.081   2.57
 6.02 Intr - 173332 173201  132  1  0   53   50   103 0.237   3.84
 6.01 Init - 173855 173673  183  2  0   17   69   180 0.459   6.12
 6.00 Prom - 187287 187248   40                              -4.06

 7.00 Prom + 202433 202472   40                              -4.46
 7.01 Init + 211090 211126   37  0  1   65   93    37 0.052   2.10
 7.02 Intr + 221865 222003  139  1  1   83   39    75 0.077   1.62
 7.03 Intr + 223504 223614  111  1  0   50  100    91 0.732   5.99
 7.04 Intr + 224699 224829  131  2  2   79   70    71 0.874   4.74
 7.05 Intr + 225386 225472   87  0  0   64   43    71 0.492   0.14
 7.06 Intr + 226671 226816  146  1  2   97   82   190 0.757  19.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:107944788_108174651|GENSCAN_predicted_peptide_1|72_aa
MAGQQFQYDDSGNTFFYFLTSFVGLIVIPATYYLWPRDQNADMATIRFPNPFPAFPLFLF
HKTAIVIMARSQ

>gi568815592r:107944788_108174651|GENSCAN_predicted_CDS_1|219_bp
atggccgggcagcagttccagtacgatgacagtgggaacaccttcttctacttcctcacc
tccttcgtggggctcatcgtgatcccggcgacatactacctctggccccgagatcagaat
gccgacatggcaaccatccgatttcccaatcctttccctgcctttcccctctttctattc
cacaaaaccgccattgtcatcatggcccgttctcaatga

>gi568815592r:107944788_108174651|GENSCAN_predicted_peptide_2|450_aa
MWECLELPRDLLSGFAQNADSDMDNKIQAKVVSDGDEELVGNWSKVREHLIHIRYFQSLM
VTYKIFIDVARHGSLGFLPQKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIMRE
VDSPASKVNKKQVVEAVTIVETPPMVVVGITVFAEHISNECKRRFYKNWHKSKKKAFTKY
CKKWQDEDVKKQLEKDFSSMKKYCHVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEK
LDWVCERLEQQVNVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPCKTHRGLCKVAC
IGAWHPARVAFSVARAGEKGYRHRTEINKKIYKIGQGYLIKDGKLIKNNASTDSDLSDKS
TNPLGGFVHYGEVTNDLVMLKGCVVGTKKRVLTLHESLLVQMKRQALEKIDLKFIDTTSK
FGHGCFQTMEQKKAFMGPLKKDGIAKEEGA

>gi568815592r:107944788_108174651|GENSCAN_predicted_CDS_2|1353_bp
atgtgggaatgtttggaacttcctagagacttgttgagtggctttgcccaaaatgctgat
agcgatatggacaataaaatccaggctaaagtggtctcagatggagatgaggaacttgtt
gggaactggagcaaagtcagagaacatcttatacacatcagatattttcagtccttaatg
gtcacctacaaaatattcattgatgtggccagacatgggtccctcggcttcctgcctcag
aagcgcagcagcaggcatcgtgggaaggtgaagagcttccctaaggatgatccgtccaag
ccggtccacctcacagccttcctgggatacaaagctggcatgacccacatcatgagggaa
gtcgacagcccagcatccaaggtgaacaagaagcaggtggtggaggctgtgaccattgtg
gagacgccacccatggtggttgtgggcattactgtcttcgctgagcacatcagtaatgaa
tgcaagaggcgtttctataagaactggcataaatctaaaaagaaggcctttacgaagtac
tgcaagaaatggcaggatgaggatgtcaagaagcagctggagaaggacttcagcagcatg
aagaaatactgccacgtcatccgcgtcattgcccacacccagatgcgcctgcttcctctg
cgccagaagaaggcccacctgatggagatccaggtgaacggaggcaccgtggctgagaag
ctggactgggtctgcgagaggctcgagcagcaggtaaatgtgaaccaagtgtttgggcag
gatgagatgatcgacgtcattggggtgaccaagggcaaaggctacaaaggggtcaccagt
cgttggcacaccaagaagctgccctgcaagacccaccgaggcctgtgcaaggtggcctgt
attggggcatggcatcctgctcgtgtggccttctctgtggcacgtgctggggagaaaggc
taccgtcaccgcactgagatcaacaagaagatctataagattggccagggctaccttatc
aaggatggcaagctgatcaagaacaatgcctccactgactctgacctgtctgacaagagc
accaatcctctgggtggctttgtccactatggtgaagtgaccaatgaccttgtcatgctg
aaaggctgtgtggtgggaaccaagaagcgggtgctcaccctccacgagtccttgctggtg
cagatgaaacggcaggctctggagaagattgaccttaagttcattgacaccacctccaag
tttggccatggctgcttccagaccatggagcagaagaaagcattcatgggaccactcaag
aaagacggaattgcaaaggaagaaggagcttaa

>gi568815592r:107944788_108174651|GENSCAN_predicted_peptide_3|122_aa
MGTLISVMPWALHRACSRQCPKWPARSCTHSLTPDLAMSPTWSLLLPVTRTAGEIPHSLA
HGWFGHGPHMELASAGARSGRLDPALTRSQAPTHKGLNVVGRASVPSGWESSEGAKKNPA
SI

>gi568815592r:107944788_108174651|GENSCAN_predicted_CDS_3|369_bp
atgggcaccctcatctcggtgatgccatgggccctgcacagagcttgctcccgccagtgc
ccaaagtggccagccagatcctgcactcactcgctcactcctgatctggccatgagcccc
acatggagcctgctcctgccagtgactagaacagctggcgagatcccacactcacttgct
catggctggtttggccatgggccccacatggagcttgcttctgctggtgcccggagcggc
cggctggatcctgcactcactcgctcacaggctcccacccacaaggggttgaatgtggtg
ggccgagcaagtgttccctccggttgggagtccagtgaaggggccaagaaaaatcctgca
tcaatctga

>gi568815592r:107944788_108174651|GENSCAN_predicted_peptide_4|51_aa
MSNEENGCDEFRKVAMGQVMYSLESRPWKPAISNRGSTAWFQILELVELGA

>gi568815592r:107944788_108174651|GENSCAN_predicted_CDS_4|156_bp
atgagcaatgaggagaatggatgtgacgagtttagaaaggtggctatgggccaggtcatg
tacagcttggagagcagaccctggaaacctgctatctccaatcgaggttcaactgcctgg
ttccagatcttggaacttgtggaattgggagcttaa

>gi568815592r:107944788_108174651|GENSCAN_predicted_peptide_5|137_aa
MEPGPTAAQRRCSLPPWLPLGLLLWSGLALGALPFGSSPHRVFHDLLSEQQLLEVEDLSL
SLLQGGGLGPLSLPPDLPDLDPECRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQ
QVVSKMDNISRAAGVCV

>gi568815592r:107944788_108174651|GENSCAN_predicted_CDS_5|414_bp
atggagccgggcccgacagccgcgcagcggaggtgttcgttgccgccgtggctgccgctg
gggctgctgctgtggtcggggctggccctgggcgcgctccccttcggcagcagtccgcac
agggtcttccacgacctcctgtcggagcagcagttgctggaggtggaggacttgtccctg
tccctcctgcagggtggagggctggggcctctgtcgctgcccccggacctgccggatctg
gatcctgagtgccgggagctcctgctggacttcgccaacagcagcgcagagctgacaggg
tgtctggtgcgcagcgcccggcccgtgcgcctctgtcagacctgctaccccctcttccaa
caggtcgtcagcaagatggacaacatcagccgagccgcgggggtttgtgtgtaa

>gi568815592r:107944788_108174651|GENSCAN_predicted_peptide_6|175_aa
MRKKRAPSRYLPLRAPQAAGPRQPGFSRRAGRPLRPLRPLPTAPAARRAHGLGGWVLARA
QRNFEGGNCSGAHGLGGGSPSLSLHRVWEGLKPKLLGLRRVRGRKPFVFEPNVKSLPLGS
HYYPSKPLGFSSSSPLEGRLPSRTFPCSYVNPCAYICYVSAGAFVMIPSKMPHYI

>gi568815592r:107944788_108174651|GENSCAN_predicted_CDS_6|528_bp
atgcgaaagaaacgcgcccctagccggtacctcccgctccgggccccgcaggcggctggg
cctcgtcagcccgggttcagccgccgcgccggccgccccctgcgccccctgcgccccctg
cccacggcccccgcagcccggcgggcgcacggcctcggcggctgggtcctcgcgcgggcg
cagaggaacttcgagggcgggaactgctccggcgctcatggactcgggggcggcagcccg
agcctctccttgcaccgtgtctgggagggcctgaagcccaaactcctcgggctgagaagg
gtccggggccgcaagccctttgtctttgaaccaaatgtcaagtccctgcccctgggaagc
cattattaccccagcaagcccctgggcttctcaagttccagtcctctagagggccgcctc
ccctccaggacctttccttgctcctatgtaaatccctgtgcctacatctgctatgtgtcc
gctggggcctttgttatgatcccgtccaagatgccacattacatctga

>gi568815592r:107944788_108174651|GENSCAN_predicted_peptide_7|217_aa
MDMLSIATLANKGALQAGGQLESGGARRRGGRCRPGLGQRPPTAPPRDSQHEQASRINKP
PSSLAPGQALAYTPGSKEPRALSSFSGCGAPGALESATGKRTAGVTVLLGPKRGPWSGQR
ARVKQRMVVRYGNQVYRFQIPNPSAFGSSCRISGRPEAAGAQTGGLRIGRILDIPCKVCG
DRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQ

>gi568815592r:107944788_108174651|GENSCAN_predicted_CDS_7|651_bp
atggacatgctcagcattgccacacttgccaataaaggagccttgcaggctggagggcag
ctggagagcggcggcgcccggcggcgaggcgggcgctgccggccgggactcgggcagcgc
ccaccaaccgctccgccccgggacagccagcatgagcaagccagccggatcaacaagcct
cctagctcgctcgccccgggacaggccctcgcctacacccctggaagtaaggagccccgg
gctctttcgtccttttcggggtgtggagcccctggggcccttgaaagtgccacagggaag
aggacagctggggtgacagtactgctgggccccaaacgtggaccctggagcggtcagagg
gcgcgtgttaagcagaggatggttgtaagatatggaaaccaagtttaccgcttccagatc
cccaacccaagcgctttcggcagcagctgtcgaatttcagggaggcctgaggccgctggg
gcccaaactggaggccttcggataggccgcattttagatatcccctgcaaagtgtgtggc
gaccgcagctcggggaagcactacggggtctacgcctgcgacggctgctcaggttttttc
aaacggagcatccgaaggaataggacctatgtctgcaaatctggaaaccag