GENSCAN 1.0	Date run:  6-Nov-116	Time: 16:46:52

Sequence gi568815592r:99269603_99494179 : 224577 bp : 39.54% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    261    256    6                               1.05
 1.05 Term -  11851  11562  290  2  2   82   45   399 0.990  29.55
 1.04 Intr -  19855  19717  139  1  1   81  113    26 0.825   3.52
 1.03 Intr -  21646  21604   43  0  1   73   93    43 0.667   0.62
 1.02 Intr -  22218  22056  163  1  1  123   43   175 0.766  14.61
 1.01 Init -  26107  25906  202  1  1   57   94    86 0.489   5.19
 1.00 Prom -  31278  31239   40                              -6.85

 2.06 PlyA -  34355  34350    6                               1.05
 2.05 Term -  41336  41176  161  0  2   74   47   128 0.096   4.42
 2.04 Intr -  54065  53842  224  1  2   45   30   257 0.867  12.45
 2.03 Intr -  56457  56351  107  0  2   79  105   103 0.439   9.19
 2.02 Intr -  73431  73296  136  2  1   81   80    62 0.095   4.35
 2.01 Init -  79770  79505  266  0  2   79   71   155 0.077   9.54
 2.00 Prom -  96207  96168   40                              -3.75

 3.05 PlyA -  96290  96285    6                               1.05
 3.04 Term - 100218  99998  221  1  2  115   38   137 0.976   7.62
 3.03 Intr - 101985 101826  160  0  1   72  108    11 0.909   0.14
 3.02 Intr - 106580 106338  243  2  0   23   78   221 0.901  11.37
 3.01 Init - 107828 107784   45  2  0   52  100    25 0.571   0.86
 3.00 Prom - 110333 110294   40                              -5.85

 4.00 Prom + 118225 118264   40                              -6.15
 4.01 Sngl + 124162 124635  474  0  0   43   43   290 0.956  16.12
 4.02 PlyA + 126062 126067    6                               1.05

 5.13 PlyA - 126402 126397    6                               1.05
 5.12 Term - 132028 130938 1091  2  2   89   35   765 0.873  62.56
 5.11 Intr - 133108 132938  171  2  0   53   44   315 0.994  22.59
 5.10 Intr - 135100 135001  100  1  1   43   71   101 0.883   2.66
 5.09 Intr - 136566 136429  138  0  0   68   30   229 0.915  14.84
 5.08 Intr - 138669 138479  191  1  2   48   78   250 0.924  18.38
 5.07 Intr - 139742 139571  172  2  1    5   -2   159 0.883  -2.81
 5.06 Intr - 141323 141139  185  0  2   59   67   167 0.757  10.29
 5.05 Intr - 143132 142949  184  2  1    1   72   123 0.004   0.44
 5.04 Intr - 155686 155541  146  2  2   33   64   187 0.012   9.88
 5.03 Intr - 167797 167644  154  1  1   60   72   134 0.587   7.72
 5.02 Intr - 174060 173963   98  1  2   36  111    19 0.486  -2.19
 5.01 Init - 176777 176195  583  2  1   42   91   392 0.489  30.29
 5.00 Prom - 177461 177422   40                              -7.45

 6.00 Prom + 177778 177817   40                              -7.95
 6.01 Sngl + 179832 180965 1134  2  0   44   55   437 0.773  32.27
 6.02 PlyA + 181182 181187    6                               1.05

 7.08 PlyA - 183136 183131    6                               1.05
 7.07 Term - 187331 187203  129  2  0   80   47    70 0.037  -0.70
 7.06 Intr - 195145 195002  144  1  0   17  116   103 0.695   5.56
 7.05 Intr - 195534 195478   57  0  0   81   86    42 0.529   1.46
 7.04 Intr - 197161 197070   92  2  2    8   51   144 0.278   1.49
 7.03 Intr - 199016 198935   82  2  1   43   95    68 0.020   1.29
 7.02 Intr - 218693 218598   96  2  0   84  105    42 0.931   4.79
 7.01 Init - 219084 219079    6  0  0   89  110     0 0.836   3.33

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  63909  63749  161  0  2   76  105    99 0.926   9.74
S.002 Term -  79626  79505  122  1  2  103   43   116 0.816   6.26
S.003 Init -  79820  79736   85  2  1   40   40   159 0.817   5.33
S.004 Term - 166244 166114  131  0  2   94   36    95 0.884   2.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:99269603_99494179|GENSCAN_predicted_peptide_1|278_aa
MPCEGVLVRILQRNRTIRIYYMELAHTIMEADKSQDLQDELASWRPRRDQCPSLKAVRQK
EICRRYSGDKKYIMGPKLSTLDATVFGHLAQAMWTLPGTRPERLIKGKPYTLLQVLGLTG
AGCSESKLFFDVAHVTAGLDILASSDPPTSVSQVAEITGMNHCAQLTYDIFSFQWVYGDV
SPRELINLAMYCERIRRKFWPEWHHDDDNTIYESEESSEGSKTHTPLLDFSFYSRTETFE
DEGAENSFSRTPDTDFTGHSLFDSDVDMDDYTDHEQCK

>gi568815592r:99269603_99494179|GENSCAN_predicted_CDS_1|837_bp
atgccctgcgaaggtgtattagtcaggattcttcagagaaaccgaaccattaggatttat
tatatggagttggctcacacaattatggaagctgacaagtcccaagatctgcaggatgag
ctggcaagctggagacctaggagggaccagtgtcccagtttgaaggcagttaggcagaag
gaaatctgtcgtcgttactcaggtgataagaagtacatcatggggcccaagctttccact
cttgacgccactgtctttggacacttggcacaggcaatgtggaccttaccagggacaaga
cccgaacggctgatcaaaggcaagccctacactcttcttcaggttttggggcttactggg
gctggatgctctgagtctaaactgtttttcgatgttgcacatgtaactgctggtcttgac
atcctggcctcaagtgatcctcctacctcagtctcccaagtagctgagataacaggtatg
aaccactgtgcccagctgacttatgatatttttagctttcaatgggtttatggagatgta
tccccacgtgagctgatcaaccttgccatgtactgtgagaggataaggaggaaattttgg
ccagagtggcaccacgatgatgacaataccatctatgagtctgaggagagcagcgaaggc
agcaaaacccacaccccgctgctggattttagcttttactcaaggacagagacctttgaa
gatgagggagcagaaaacagtttttccagaaccccagacacagattttactggacactca
ctctttgattcggatgtggacatggatgactatacagaccacgaacagtgcaagtga

>gi568815592r:99269603_99494179|GENSCAN_predicted_peptide_2|297_aa
MHWGVGFASSRPCVVDLSWNQSISFFGWWAGSEEPFSFYGDIIAFPLQDYGGIMAGLGSD
PWWKKTLYLTGGALLAAAAYLLHELLVIRKQQEIDSKDAIILHQFARPNNGVPSLSPFCL
KMETYLRMADLPYQASSNAACTHVPLTEVLAVRQAADALHAYTFTLCSARTLAYCQWVDN
LNETRKMLSLSGGGPFSNLLRWVVCHITKGIVKREMHGHGIGRFSEEEIYMLMEKDMRSL
AGLLDHATAPHRDAHLISTLGLQVLARSCLLTTQQPHTHTFYESEWEKPSEPGSGKG

>gi568815592r:99269603_99494179|GENSCAN_predicted_CDS_2|894_bp
atgcactggggggttggctttgcttcgtccaggccgtgcgtggtggatctgagctggaac
cagagcatctccttcttcggctggtgggccgggtccgaggagcccttctccttttatggg
gacatcatcgctttccctttgcaggattacggtgggatcatggcagggctgggctccgat
ccctggtggaagaaaaccctttacttgaccgggggagctttgctggccgcagctgcgtat
ctgctccacgaactcctggtcattaggaaacagcaagagattgactctaaagatgctatt
attttgcatcagtttgcaagacctaacaatggtgttccaagtttatctcctttctgttta
aagatggaaacttatttaaggatggctgacttaccgtatcaggcttcctcaaatgcagcc
tgtacccacgtgccccttacagaagttcttgcagttcgtcaggcagctgatgctcttcat
gcgtacaccttcaccctctgctctgcccggacattagcttattgccagtgggtggacaat
ctcaatgagacccggaagatgctctctcttagtggtggtggtcccttcagcaacctgctg
aggtgggttgtgtgccacataacgaaaggaattgtgaaacgcgagatgcacggccacggc
attggccgcttctccgaggaagagatttacatgctgatggagaaggacatgcggtcttta
gcagggcttttggatcatgcaacagcacctcatagagatgcccacctcatctccacatta
ggccttcaagtcttggccagaagctgcttgcttacaacacagcagccacacactcatacc
ttctatgaaagtgaatgggaaaagccttcagaaccaggcagtggaaaaggatga

>gi568815592r:99269603_99494179|GENSCAN_predicted_peptide_3|222_aa
MKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSLEE
IVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIVFS
EQIASIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLNYA
AYAVKSRVQEHPASAEFVLKGETEELQANACTNPAVHEKLKK

>gi568815592r:99269603_99494179|GENSCAN_predicted_CDS_3|669_bp
atgaagattcttgacgttggctgtggtggtgggctgttaactgaacctctagggcggctt
ggggcttcagttattggaatcgaccctgtggatgagaacattaaaacagcacaatgccat
aaatcatttgatccagtcctggataagagaatagagtacagagtgtgttccctggaagag
attgtggaagagactgcagaaacatttgatgctgttgtagcttctgaagttgtagaacat
gtgattgatctagaaacatttttacagtgctgctgtcaagtgttaaaacccggtggttct
ttattcattactacaatcaacaaaacacaactttcctatgccttgggaattgttttttca
gagcaaattgcaagtattgtaccaaaaggtactcatacatgggagaagtttgtttcacct
gaaacactagagagcattctggaatcaaatggtctgtcagttcaaacagtggtaggaatg
ctctataaccccttctcaggttactggcattggagtgaaaataccagccttaactatgca
gcttatgctgtgaaatccagggtccaggaacacccagcctctgctgagtttgttttaaag
ggagaaacagaagagctccaagctaatgcctgcaccaatccagctgtgcatgaaaagctg
aagaaatga

>gi568815592r:99269603_99494179|GENSCAN_predicted_peptide_4|157_aa
MTFRLQHTQSGSPAPGARSSATRDPRPALFQTGPLVLSSFPRRPPTGLCEVYNGERWGQD
QALGFALTPREVQRQPTAPPPAHAQRRQRSQLTACEGPPHTHSPAEEIKGRAAFVLQPPG
PSTLKNQPPEEPSLRPLHIATNDPTSFPVPPEKRSPT

>gi568815592r:99269603_99494179|GENSCAN_predicted_CDS_4|474_bp
atgaccttcagactgcagcacacgcagagcgggtcgccggctcctggggcaaggagctca
gccacaagagacccgcggcctgcgcttttccagacaggaccactggtcctgagctctttt
ccccggcgtccgccaacgggactatgcgaggtttacaatggagagagatggggccaggac
caagccttaggtttcgcgctgacccctcgcgaggtccagagacaacccaccgccccaccc
ccggcgcatgcgcagagacgccagcgctcgcaattgactgcatgcgaaggacctccgcac
acacactcacccgccgaggaaattaagggacgcgcagcttttgtattacagcctccaggc
cccagcactcttaaaaaccaacccccggaggagcccagcttacggccactccacatcgcg
acaaacgatcccacctcttttccggtccctcccgaaaaaagatccccaacataa

>gi568815592r:99269603_99494179|GENSCAN_predicted_peptide_5|1070_aa
MNGDSLMFASLMNSESRLNESPTDDSEKEASHSESNVDADSEPSESESASKQTGLFRSSS
GSGVQPDGPLYPLSAGKLLYTKETDSGDKEMAEAISELRLSSTVTGDQDFDRENQPLNIS
NNLCFLEGKHLRSYSPQNAFQTLSQSYITTSKECSIQSCLYQFTSMELLMGNNKLLCENC
TKNKQKYQEETSFAEKKVEGVYTNARKQLLISAVPAVLILHLKRFHQNASVGDKVLYGLY
GIVEHSGSMREGHYTAYVKVRTPSRKLSEHNTKKKNVPEVEASKALERCYRNGGDKGVPE
LEWVSDGEQLYVGTCRTITTFLVSVAKIDWAALAQAWIAQREASGQQSMVEQPPGMMPNG
QDMSTMESGPNNHGNFQGDSNFNRMWQPDQPWMPPTPGPMDIVPPSEDSNSQDSGEFAPD
NRHIFNQNNHNFGGPPDNFAVGPVNQFDYQHGAAFGPPQGGFHPPYWQPGPPGPPAPPQN
RRERPSSFRDRQRSPIALPVKQEPPQIDAVKRRTLPAWIREGLEKMEREKQKKLEKERME
QQRSQLSKKEKKATEDAEGGDGPRLPQRSKFDSDEEEEDTENVEAASSGKVTRSPSPVPQ
EEHSDPEMTEEEKEYQMMLLTKMLLTEILLDVTDEEIYYVAKDAHRKATKGGLGGYGSGD
SEDERSDRGSESSDTDDEELRHRIRQKQEAFWRKEKEQQLLHDKQMEEEKQQTERVTKEM
NEFIHKEQNSLSLLEAREADGDVVNEKKRTPNETTSVLEPKKEHKEKEKQGRSRSGSSSS
GSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRS
YSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDRRTNRASRSR
SRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKEREREQDKRKEKQ
KREEKDFKFSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSD
SSGRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKASRKHKSKSRSR

>gi568815592r:99269603_99494179|GENSCAN_predicted_CDS_5|3213_bp
atgaatggggattctttaatgtttgccagcctcatgaattctgagtcacgtctgaatgaa
agccctactgatgacagtgaaaaagaagccagccattctgaaagcaatgttgatgctgac
agtgagccttcagaatctgaaagtgcttcaaagcagactgggctgttcagatccagtagt
ggatccggtgtgcagccagatggacccctttaccctctgtcagcaggtaaactgctgtac
accaaggagactgacagtggtgataaggaaatggcagaagctatttctgaacttcgtttg
agcagcactgtaactggagatcaagattttgacagagaaaatcagccactaaatatttca
aataatttatgttttttagaggggaagcatttgaggtcttatagtccccaaaatgctttt
cagaccctttctcagagctatataactacttctaaagaatgttcaattcagtcctgtctc
taccagtttacatctatggaattactaatggggaataataagcttctatgtgagaattgt
actaaaaacaaacagaagtaccaagaagaaaccagttttgcagaaaagaaagtagaagga
gtttatactaatgccaggaagcaattgctcatttctgctgttccagctgtcctaattctc
cacctgaaaagatttcatcagaatgcaagtgtgggagataaagttctctacggtctctat
ggcatagtggaacatagtggctcgatgagagaaggccactacactgcttatgtgaaagtg
agaacaccctccaggaaattatcggaacataacactaaaaagaaaaatgtgcctgaagta
gaagcatcgaaagcgttggagaggtgttaccggaacggcggcgacaagggtgttcccgaa
ctagagtgggtaagtgatggagaacaattatacgtgggcacttgccggaccattacaacg
ttcttggtttctgtggcgaagattgattgggctgcattggcccaagcttggattgcccaa
agagaagcttcaggacagcaaagcatggtagaacaaccaccaggaatgatgccaaatgga
caagatatgtctacaatggaatctggtccaaacaatcatgggaatttccaaggggattca
aacttcaacagaatgtggcaaccagatcagccatggatgccaccaacaccaggcccaatg
gacattgttcctccttctgaagacagcaacagtcaggacagtggggaatttgcccctgac
aacaggcatatatttaaccagaacaatcacaactttggtggaccacccgataattttgca
gtggggccagtgaaccagtttgactatcagcatggggctgcttttggtccaccgcaaggt
ggatttcatcctccttattggcaaccaggacctccaggacctccagcacctccccagaat
cgaagagaaaggccatcatcattcagggatcgtcagcgttcacctattgcacttcctgtg
aagcaggagcctccacaaattgacgcagtaaaacgcaggactcttcccgcttggattcgc
gaaggtcttgaaaaaatggaacgtgaaaagcagaagaaattggagaaagaaagaatggaa
caacaacgttcacaattgtccaaaaaagaaaaaaaggccacagaagatgctgaaggaggg
gatggccctcgtttacctcagagaagtaaatttgatagtgatgaggaagaagaagacact
gaaaatgttgaggctgcaagtagtgggaaagtcaccagaagtccatccccagttcctcaa
gaagagcacagtgaccctgagatgactgaagaggagaaagagtatcaaatgatgttgctg
acaaaaatgcttctaacagaaattctgctggatgtcacagatgaagaaatttattacgta
gccaaagatgcacaccgcaaagcaacgaaaggtggactgggtggttatggatcaggagac
agtgaagatgagaggagtgacagaggatctgagtcatctgacactgatgatgaagaatta
cggcatcgaatccggcaaaaacaggaagctttttggagaaaagaaaaagaacagcagcta
ttacatgataaacagatggaagaagaaaagcagcaaacagaaagggttacaaaagagatg
aatgaatttatccataaagagcaaaatagtttatcactactagaagcaagagaagcagac
ggtgatgtggttaatgaaaagaagagaactccaaatgaaaccacatcagttttagaacca
aaaaaagagcataaagaaaaagaaaaacaaggaaggagtaggtcgggaagttctagtagt
ggtagttccagtagcaatagcagaactagtagtactagtagtactgtctctagctcttca
tacagttctagctcaggtagtagtcgtacttcttctcggtcttcttctcctaaaaggaaa
aagagacacagtaggagtagatctccaacaatcaaagctagacgtagcaggagtagaagc
tattctcgcagaattaaaatagagagcaatagggctagggtaaagattagagatagaagg
agatctaatagaaatagcattgaaagagaaagacgacgaaatcggagtccttcccgagag
agacgtagaagtagaagtcgctcaagggatagacgaaccaatcgtgccagtcgcagtagg
agtcgagataggcgtaaaattgatgatcaacgtggaaatcttagtgggaacagtcataag
cataaaggtgaggctaaagaacaagagaggaaaaaggagaggagtcgaagtatagataaa
gataggaaaaagaaagacaaagaaagggaacgtgaacaggataaaagaaaagagaaacaa
aaaagggaagaaaaagattttaagttcagtagtcaggatgatagattaaaaaggaaacga
gaaagtgaaagaacattttctaggagtggttctatatctgttaaaatcataagacatgat
tctagacaggatagtaagaaaagtactaccaaagatagtaaaaaacattcaggctctgat
tctagtggaaggagcagttctgagtctccaggaagtagcaaagaaaagaaggctaagaag
cctaaacatagtcgatcgcgatccgtggagaaatctcaaaggtctggtaagaaggcaagc
cgcaaacacaagtctaagtcccgatcaaggtag

>gi568815592r:99269603_99494179|GENSCAN_predicted_peptide_6|377_aa
MVKGSIQQEELTILNIYAPNTGAPNTGAPTFIKQVPRDLQRNLDSHTIIMGDFNTPLSTL
DRSMRQKVNKDSQELNSALHQVDLVDMNRTLHPKSTEYTFFSAHHTYSKIDHTVGSQALL
SKCKRTEIITNCLSDHSAIKLELRIKKLTQNRSTTWKLKNLLLNDYWLHNEMKAEIKMLF
ETNENKDTTYQNLWDTFKAVCRGKFIVLNAHKRKQERSKIDTLTSQLKELEKQEQTNSKA
SRRQEITKIRAELKEIETQKKTLQKINESRSWFFEKINKIDKPLARQIKKKREKNQIGTI
KSDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLHTYTLPRLNQEELESLNRSI
TGSEIEAIINSLPIKKS

>gi568815592r:99269603_99494179|GENSCAN_predicted_CDS_6|1134_bp
atggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaat
acaggagcacccaatacaggagcacccacattcataaagcaagtccccagagacctacaa
agaaacttagactcccacacaataataatgggagactttaacaccccactgtcaacatta
gacagatcaatgagacagaaagttaacaaggatagccaggaattgaactcagctctgcat
caagtggacctagtagacatgaacagaactctccaccccaaatcaacagaatatacattc
ttctcagcacatcacacttattccaaaattgaccacacagttggaagtcaagcactcctc
agcaaatgtaaaagaacagaaattataacaaattgtctctcagaccacagtgcaatcaaa
ctagaactcaggattaagaaactcactcaaaaccgctcaactacatggaaactgaaaaac
ctgctcctgaatgactactggttacataacgaaatgaaggcagaaataaagatgctcttt
gaaaccaatgagaacaaagacacaacataccagaatctatgggacacatttaaagcagtg
tgtagagggaaatttatagtactaaatgcccacaagagaaagcaggaaagatctaaaatt
gacaccctaacatcacaattaaaagaactagagaagcaagagcaaacaaattcaaaagct
agcagaaggcaagaaataactaagatcagagcagaactgaaagagatagagacacaaaaa
aaaacccttcaaaaaatcaatgaatccaggagctggttttttgaaaagatcaacaaaatc
gataaaccactagcaagacaaataaagaagaaaagagagaagaatcaaataggcacaata
aaaagtgataaaggggatatcaccactgatcccacagaaatacaaactaccatcagagaa
tactataaacacctctacgcaaataaactagaaaacctagaagaaatggataaattcctc
cacacatacaccctcccaagactaaaccaggaagaacttgaatccctgaatagatcaata
acaggctctgaaatagaggcaataattaatagcctaccaatcaaaaaaagttga

>gi568815592r:99269603_99494179|GENSCAN_predicted_peptide_7|201_aa
MQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLRIQASILKAFNNPTTKTADDETRKKV
KAYGKEGVKMNFIDRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEERVSKPLLWGR
MNKYRSLRETDHDRYSGNVTIENIHQPRAAKKHSSSKDKVCSLLRKRIQRYFSHLLLKEE
KYGSVPPAHQRSEFKVISPIP

>gi568815592r:99269603_99494179|GENSCAN_predicted_CDS_7|606_bp
atgcagaacttggcacagacttatactcttactgatctgatgaatgagatcaaagaaagt
agtacaaaactcaagatttttccttcctcagactctcagctgcgaatacaagctagcatt
ctaaaagcatttaacaacccaactactaaaactgctgatgatgaaactagaaaaaaagtc
aaagcatatggaaaagaaggtgtgaaaatgaacttcatagatcggatctttattggtgaa
ttaactagcacggtcatgtgtgaagaatgtgcaaatatctccacggtgaaagatccattc
attgatatttcacttcctataatagaagaaagggtttcaaaacctttactttggggaaga
atgaataaatatagaagtttacgggagacagatcatgatcgatacagtggcaatgttact
atagaaaatattcatcaacctagagctgccaagaagcattcttcatctaaagataaggta
tgttccttgctgagaaaaagaattcagcgatatttctcccatttgcttttgaaagaagag
aaatatggctctgttccgccagctcaccagaggtcagagtttaaggttatctctcctatt
ccctga