GENSCAN 1.0	Date run:  6-Nov-116	Time: 03:39:36

Sequence gi568815592f:36370098_36587172 : 217075 bp : 43.52% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 Intr -   1463   1233  231  0  0   93  105   201 0.965  20.04
 1.06 Intr -   3481   3356  126  2  0  107  100   121 0.993  15.85
 1.05 Intr -   5938   5774  165  2  0   61   71   181 0.867  13.63
 1.04 Intr -  15572  15437  136  2  1  115   94    32 0.274   6.64
 1.03 Intr -  16715  16478  238  1  1   76  -32   108 0.226  -4.78
 1.02 Intr -  17257  17138  120  0  0  103   48   101 0.925   7.21
 1.01 Init -  18028  17961   68  1  2   90   47    94 0.982   4.10
 1.00 Prom -  19790  19751   40                              -5.46

 2.04 PlyA -  20484  20479    6                               1.05
 2.03 Term -  26441  26135  307  1  1   79   55   117 0.700   2.09
 2.02 Intr -  30487  30322  166  2  1  100   91    85 0.403   9.02
 2.01 Init -  55868  55817   52  2  1   69  110    18 0.280   3.42
 2.00 Prom -  58522  58483   40                              -3.16

 3.00 Prom +  61080  61119   40                              -3.56
 3.01 Init +  72498  72613  116  2  2   62  102    78 0.397   6.28
 3.02 Intr +  78766  78917  152  1  2   66   73    60 0.212   2.11
 3.03 Intr + 104692 104965  274  2  1   78   88   155 0.655  11.10
 3.04 Intr + 109024 109126  103  1  1   44   70   162 0.915  10.18
 3.05 Intr + 109494 109614  121  2  1   94   80    64 0.999   6.27
 3.06 Intr + 111465 111662  198  1  0  111   19   269 0.988  21.62
 3.07 Intr + 114617 114727  111  0  0  111   93   103 0.999  13.45
 3.08 Term + 116786 117078  293  0  2   88   49   165 0.971   8.11
 3.09 PlyA + 121026 121031    6                               1.05

 4.19 PlyA - 123813 123808    6                               1.05
 4.18 Term - 125817 125687  131  1  2   79   38   146 0.954   7.04
 4.17 Intr - 126708 126614   95  2  2   51   92    89 0.809   5.21
 4.16 Intr - 128389 128266  124  2  1   75   52    39 0.746  -1.36
 4.15 Intr - 129893 129776  118  2  1   87  123   107 0.896  14.14
 4.14 Intr - 131203 131150   54  1  0   91   80    22 0.555   0.88
 4.13 Intr - 136547 136486   62  0  2   88   94    29 0.634   1.95
 4.12 Intr - 137505 137403  103  0  1  110   89   -23 0.230  -0.25
 4.11 Intr - 138966 138847  120  0  0   97   50    45 0.305   2.29
 4.10 Intr - 145395 145241  155  1  2   89   67    99 0.122   7.69
 4.09 Intr - 147743 147620  124  2  1   40   76    31 0.420  -2.74
 4.08 Intr - 151720 151637   84  1  0   79  103    30 0.595   3.62
 4.07 Intr - 154366 154244  123  1  0   48   83    68 0.838   3.08
 4.06 Intr - 155545 155494   52  0  1   99   76    79 0.975   6.71
 4.05 Intr - 170110 169975  136  2  1  117   88    39 0.849   6.43
 4.04 Intr - 176620 176527   94  1  1   34   99    55 0.628   0.74
 4.03 Intr - 177286 177093  194  2  2   96  105    47 0.741   6.41
 4.02 Intr - 179308 179197  112  1  1  -61   -7   276 0.298   3.15
 4.01 Init - 188126 188112   15  2  0   75   99    16 0.220   1.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:36370098_36587172|GENSCAN_predicted_peptide_1|362_aa
MRGPFLSYVRRLTGSFLVLGSGPRGSPPLTLSVSYTALKASRTAPAGPFRSPLTTGRPYT
NQMRQPLRSDYLGNSTKGGPAGNEVRTTRKGVESPFAAAKASGVCFAGSDPNSLSADISP
RIPRDECKAFDNPRVKNDLMELEGELAISPISPVAAMPPLGTHVQARCEAQINLLGEGGI
CKLPGRLRIQPALWSREDVLHWLRWAEQEYSLPCTAEHGFEMNGRALCILTKDDFRHRAP
SSGDVLYELLQYIKTQRRALVCGPFFGGIFRLKTPTQHSPVPPEEVTGPSQMDTRRGHLL
QPPDPGLTSNFGHLDDPGLARWTPGKEESLNLCHCAELGCRTQGVCSFPAMPQAPIDGRI
AX

>gi568815592f:36370098_36587172|GENSCAN_predicted_CDS_1|1086_bp
atgcgaggccccttcctatcctatgtgcggagactcacagggtccttcctggtcctgggc
tcgggaccacgcgggtcaccgcccctgactctctcggtgtcatacacagctctgaaggca
tcacgcacagcccctgcgggccctttccgcagcccccttaccactggtcgcccctacacc
aaccagatgaggcaacccctgaggtctgattacttgggaaacagcaccaaagggggaccg
gctggaaatgaagtgagaacgacccggaaaggtgttgaatcccctttcgcagcagccaag
gcttctggagtttgctttgctggctccgatccaaattctctctcggcagatatctctcct
cggatcccaagagatgaatgtaaagcttttgacaatcctagagtgaaaaatgacttgatg
gagctggagggagaattggctatttctcctataagccctgtggcagccatgcctccccta
ggcacccacgtgcaagccagatgtgaagctcaaattaacctgctgggtgaaggggggatc
tgcaagctgccaggaagactccgcatccagcccgcactgtggagcagggaggacgtgctg
cactggctgcgctgggcagagcaggagtactctctgccatgcaccgcggagcacgggttc
gagatgaacggacgcgccctctgcatcctcaccaaggacgacttccggcaccgtgcgccc
agctcaggtgacgtcctgtatgagctgctccagtacatcaagacccagcggcgagccctg
gtgtgtgggcccttttttggagggatcttcaggctgaagacgcccacccagcactctcca
gtccccccggaagaggtgactggcccctctcagatggacacccgaaggggccacctgctg
cagccaccagacccagggcttaccagcaacttcggccacctggatgaccctggcctggca
aggtggacccctggcaaggaggagtccctcaacttatgtcactgtgcagagctcggctgc
aggacccagggggtctgttccttccccgcgatgccgcaggcccccattgacggcaggatc
gctgnn

>gi568815592f:36370098_36587172|GENSCAN_predicted_peptide_2|174_aa
MTQLVSSQPVPAMSRNPDHNLLSQPKEHSIVQKHHQEEIIHKLAMQLRHIGDNIDHRMVR
EVRLQFPQPGPVRNQSASGAMRDSAPTPAQRLEQALGAERGQAVAADTPEPSGVGVGCFL
GPLRVQAAEMPGSCNWEGGHSGTQGAPAPTQKGLGSYWLHGACGPSCTFLLQPA

>gi568815592f:36370098_36587172|GENSCAN_predicted_CDS_2|525_bp
atgacccaacttgtcagctcccagccagttccagccatgtcaaggaacccagatcataat
ctactttctcagcccaaggagcatagcattgttcagaagcatcaccaggaggaaataatt
cacaagttggccatgcagctgagacacattggggacaacattgatcataggatggttcga
gaggtgaggcttcagtttccccagccagggcctgtcaggaatcaatctgcctccggcgcc
atgcgggactcagccccaacccctgctcagagattggagcaggctctgggagcagagaga
ggccaggcagtggcagcagacacccctgagccttcaggggtaggggtagggtgcttcctg
gggcccctgagggtgcaagctgcagagatgcctgggtcctgcaactgggagggtggccac
agtggcacccagggagctcctgccccaactcagaaggggctgggctcctactggctccat
ggagcatgtggccccagctgcaccttcctgctgcagccagcatga

>gi568815592f:36370098_36587172|GENSCAN_predicted_peptide_3|455_aa
MYIQGSDFRANAFKQLQYSYYATSNLAPRMGRSGFHIFGGFVVLLTSGVKPQTFSVSVTA
LKGGVSGVVCSSRWVRGLADFRSEAADLCNLSLDYASQPANLQFPHIMPLAEDIKGSCFQ
SGNKRNHEPFIAPERFGNSSVGFGSNSHSQAPEKVTLLVDGTRFVVNPQIFTAHPDTMLG
RMFGPGREYNFTRPNEKGEYEIAEGISATVFRTVLDYYKTGIINCPDGISIPDLRDTCDY
LCINFDFNTIRCQDLSALLHELSNDGAHKQFDHYLEELILPIMVGCAKKGERECHIVVLT
DEDSVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKTVLKERGLKNIRIGIEGY
PTCKEKIKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVAAGDD
VLEDQEILMHHPPQVDELDRLNAPLSQMASNDFQD

>gi568815592f:36370098_36587172|GENSCAN_predicted_CDS_3|1368_bp
atgtatatccagggtagtgactttcgagcaaatgcgtttaagcaactccagtattcttac
tacgctacctccaacctcgctccacgcatggggagatcagggttccacattttcggtggg
ttcgtggtcttgctgacttcaggagtgaagccgcagaccttctcagtgagtgttacagct
cttaaaggtggcgtgtctggagttgtttgttcctcccggtgggttcgtggtcttgctgac
ttcaggagtgaagctgcagacctttgcaacctctcacttgactatgcctctcagccagca
aatcttcagttccctcacataatgccccttgctgaagacatcaaaggttcttgcttccaa
agtgggaataaacggaaccatgaaccttttattgctccagaaagatttggaaacagtagt
gtgggctttggcagtaattcccattcccaagcaccagagaaagtgacgcttcttgtagat
ggcacacgttttgttgtgaatccacagattttcactgctcatccggataccatgctggga
aggatgtttggaccaggaagagagtacaacttcactcggcccaatgagaagggagagtat
gagattgctgaaggcatcagtgcaactgtatttcgcacagtgctggattattacaaaacc
ggtatcatcaattgtcctgatggcatctctatcccagatcttagagatacttgtgattat
ctctgcattaattttgacttcaacactatccgatgtcaagatctgagtgctttactccat
gaactgtctaatgacggtgctcataagcagtttgatcactacctcgaagagctcatcttg
cccatcatggtgggctgtgccaagaaaggagaacgagagtgccacattgttgtgctgacg
gatgaggattctgtggactgggatgaagaccaccctccaccaatgggggaggaatattcc
caaattctttatagctccaagctctacagattcttcaaatatattgagaatagggatgtt
gcaaaaacagtgttaaaggaacggggcctaaaaaacattcgcattggaattgaaggttac
cctacctgtaaagaaaaaattaagagaaggcctggcggccggtctgaagtcatctataat
tatgtacaacgccccttcatccagatgtcatgggaaaaggaagaagggaagagtcgccat
gtggatttccagtgtgttcgaagcaaatccctcacgaatctggtagctgctggagatgat
gtcttggaggaccaggagatattaatgcatcacccaccccaagtggatgaacttgaccgg
ctaaatgccccactttctcagatggcttctaacgactttcaggattag

>gi568815592f:36370098_36587172|GENSCAN_predicted_peptide_4|631_aa
MQKKLKKEKEKEKEKKKKKKKKKKKKKKKKRKKKKKKRLAGHVGTLPVVLTRNRLLPPVS
ESLTRPLPSLARWLPPPGLRQPSSRDYWPKGRLRLSAVPSPASPWALDTGLQISFKSQEK
AGKILKKRVEKQQPEEKVAAMAMTGSTPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEE
REMRQKKLEKVMEEEGLKDEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAF
GEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL
NLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL
DSKATRRREERRPFQEPRLRGFLSQCCDTPFRALRFLASPSFQGHVKLSDFGLCTGLKKA
HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLSWYVRVEYWNAENVSLGQAFST
VGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLT
FPPEVPISEKAKDLILRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPETDYK
NKDWVFINYTYKRFEGLTARGAIPSYMKAAK

>gi568815592f:36370098_36587172|GENSCAN_predicted_CDS_4|1896_bp
atgcagaagaaactgaagaaggagaaggagaaggagaaggagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaggaagaagaagaagaagaaaagattagct
gggcatgttggaacgcttcctgttgtcctcacccgtaaccgcctgttgccccctgtctca
gagtccctcacgcgtcccctcccgtctttggctcgttggctgccgccgccggggcttcgc
cagccttcaagtcgagactactggccgaaggggcgtctgcggctctccgccgtccccagc
cctgcctctccctgggctctggatactgggcttcagataagcttcaaatcacaggaaaag
gcagggaaaattcttaagaagagagtggaaaagcaacagccagaggaaaaagtcgcagcc
atggcaatgacaggctcaacaccttgctcatccatgagtaaccacacaaaggaaagggtg
acaatgaccaaagtgacactggagaatttttatagcaaccttatcgctcaacatgaagaa
cgagaaatgagacaaaagaagttagaaaaggtgatggaagaagaaggcctaaaagatgag
gagaaacgactccggagatcagcacatgctcggaaggaaacagagtttcttcgtttgaag
agaacaagacttggattggaagattttgagtccttaaaagtaataggcagaggagcattt
ggtgaggtacggcttgttcagaagaaagatacgggacatgtgtatgcaatgaaaatactc
cgtaaagcagatatgcttgaaaaagagcaggttggccacattcgtgcggagcgtgacatt
ctagtggaggcagacagtttgtgggttgtgaaaatgttctatagttttcaggataagcta
aacctctacctaatcatggagttcctgcctggaggggacatgatgaccttgttgatgaaa
aaagacactctgacagaagaggagactcagttttatatagcagaaacagtattagccata
gactctattcaccaacttggattcatccacagagacatcaaaccagacaaccttcttttg
gacagcaaggcaacaagaaggagagaagagcggcggcccttccaggagcccagacttagg
ggcttcctgagccagtgctgtgacaccccctttagggctctgcggtttctggcatctcca
agcttccagggccatgtgaaactttctgactttggtctttgcacaggactgaaaaaagca
cataggacagaattttataggaatctgaaccacagcctccccagtgatttcactttccag
aacatgaattccaaaaggaaagcagaaacctggaaaagaaatagacgtcagctatcctgg
tatgttagagtagaatactggaatgcagaaaatgtttctcttggtcaggccttctccaca
gtaggcactcctgactacattgctcctgaggtgttcatgcagaccgggtacaacaagctc
tgtgattggtggtcgcttggggtgatcatgtatgagatgctcatcggctacccacctttc
tgttctgagacccctcaagagacatataagaaggtgatgaactggaaagaaactttgact
tttcctccagaagttcccatctctgagaaagccaaggatctaattttgagagagagacct
gctgcaatatctattgaaatcaaaagcattgatgatacctcaaacttcgatgagtttcca
gaatctgatattcttaagccaacagtggccacaagtaatcatcctgagactgactacaag
aacaaagactgggtcttcatcaattacacgtacaagcgctttgagggcctgactgcaagg
ggggcaataccttcctacatgaaagcagcaaaatag