GENSCAN 1.0	Date run:  8-Feb-118	Time: 18:24:19

Sequence gi568815592f:25661963_25879185 : 217223 bp : 38.56% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2981   3070   90  1  0  117  109    53 0.924   9.57
 1.02 Intr +   7549   7605   57  0  0   92   77    78 0.900   5.26
 1.03 Intr +   8037   8114   78  2  0   83  115    46 0.893   5.63
 1.04 Term +  10853  10969  117  1  0   47   53    77 0.182  -2.34
 1.05 PlyA +  13073  13078    6                               1.05

 2.03 PlyA -  13243  13238    6                               1.05
 2.02 Term -  13657  13637   21  1  0   91   43    53 0.517  -1.57
 2.01 Init -  17002  16856  147  1  0   71   49   176 0.807  12.14
 2.00 Prom -  17663  17624   40                              -8.65

 3.00 Prom +  17698  17737   40                              -2.95
 3.01 Init +  23079  23219  141  2  0   36   44   175 0.777   8.08
 3.02 Intr +  27511  27570   60  0  0  111   81    60 0.815   5.61
 3.03 Intr +  29094  29162   69  2  0   82  109   100 0.821   9.96
 3.04 Term +  39245  39373  129  1  0  114   36   148 0.993   9.40
 3.05 PlyA +  39796  39801    6                               1.05

 4.00 Prom +  61499  61538   40                              -3.65
 4.01 Init +  64947  65326  380  2  2   70   82   442 0.851  38.22
 4.02 Intr +  69892  70171  280  1  1   17   27   351 0.886  18.46
 4.03 Term +  70496  70783  288  1  0   15   46   442 0.885  27.09
 4.04 PlyA +  71558  71563    6                               1.05

 5.02 PlyA -  73651  73646    6                               1.05
 5.01 Sngl -  97380  96823  558  0  0   81   47   211 0.965  12.18
 5.00 Prom -  97884  97845   40                              -8.25

 6.00 Prom +  98422  98461   40                              -6.95
 6.01 Init + 100001 100091   91  1  1   67   93   104 0.958   9.50
 6.02 Intr + 107023 107228  206  2  2  123  115   155 0.896  19.70
 6.03 Intr + 108105 108338  234  2  0   60   81   193 0.965  12.76
 6.04 Intr + 108422 108509   88  1  1   79   93    34 0.800   1.62
 6.05 Intr + 108964 109050   87  2  0   84   97    30 0.621   2.52
 6.06 Intr + 111621 111712   92  1  2   45   95    53 0.392   0.49
 6.07 Intr + 114633 114765  133  2  1   57   87    52 0.726   1.30
 6.08 Intr + 114850 114997  148  2  1  109   62   106 0.836   8.47
 6.09 Intr + 115964 116054   91  2  1   80   94    65 0.989   5.38
 6.10 Term + 117092 117226  135  1  0  122   53   100 0.999   6.94
 6.11 PlyA + 118862 118867    6                               1.05

 7.00 Prom + 123580 123619   40                              -5.85
 7.01 Init + 124367 124697  331  1  1   70    9   213 0.568   9.12
 7.02 Intr + 124813 124902   90  2  0   69   68    87 0.535   3.85
 7.03 Term + 130556 130770  215  0  2    8   42   129 0.135  -3.29
 7.04 PlyA + 131880 131885    6                               1.05

 8.19 PlyA - 132355 132350    6                               1.05
 8.18 Term - 136957 136823  135  1  0   71   49   109 0.790   2.34
 8.17 Intr - 139018 138928   91  0  1   50  110    28 0.372   0.28
 8.16 Intr - 149583 149436  148  1  1   75   91    25 0.470  -0.13
 8.15 Intr - 149808 149676  133  0  1   73  115    92 0.925   9.70
 8.14 Intr - 151030 150869  162  1  0  101  107    31 0.913   5.55
 8.13 Intr - 151251 151133  119  1  2   64   75    75 0.925   3.06
 8.12 Intr - 157636 157549   88  1  1   72  103    66 0.950   5.12
 8.11 Intr - 157953 157720  234  0  0   99   67   168 0.989  12.76
 8.10 Intr - 164665 164499  167  2  2   66   83    53 0.079   1.36
 8.09 Intr - 175242 174968  275  2  2   79   15   186 0.341   6.66
 8.08 Intr - 180959 180765  195  1  0   17   75   122 0.012   1.41
 8.07 Intr - 187990 187843  148  2  1  110   97   114 0.953  12.87
 8.06 Intr - 192954 192902   53  2  2   82   82    36 0.412   0.03
 8.05 Intr - 198507 198423   85  1  1   61   58   117 0.508   3.96
 8.04 Intr - 199749 199662   88  0  1   31  110    12 0.832  -3.68
 8.03 Intr - 200067 199834  234  0  0   41   80   169 0.962   8.36
 8.02 Intr - 200482 200271  212  2  2   47  121   153 0.616  12.21
 8.01 Init - 206425 206335   91  1  1   84   94    91 0.520  10.00
 8.00 Prom - 207586 207547   40                              -5.35

 9.00 Prom + 209205 209244   40                              -3.65
 9.01 Init + 209835 209915   81  2  0   72  115    22 0.789   4.32
 9.02 Term + 211584 211871  288  2  0  102   48   108 0.579   2.59
 9.03 PlyA + 212331 212336    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 183554 183420  135  2  0   71   49    87 0.860   0.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:25661963_25879185|GENSCAN_predicted_peptide_1|113_aa
LAGMFLSEDENFLLLFRRENPLDSSVEFMQIWRKYDADSSGFISAAELRNFLRDLFLHHK
KAISEAKLEEYTGTMVMEDGNLDSGEVAEEVRTKYILKIDLRRFPDESGGSQG

>gi568815592f:25661963_25879185|GENSCAN_predicted_CDS_1|342_bp
cttgctggtatgttcttatctgaggatgaaaactttcttctgctctttcgccgggaaaac
ccactggacagcagcgtggagtttatgcagatttggcgcaaatatgacgctgacagcagt
ggctttatatcagctgctgagctccgcaacttcctccgagacctctttcttcaccacaaa
aaggccatttctgaggctaaactggaagaatacactggcaccatggtgatggaagatggc
aacttggactcaggtgaggtggcagaagaggtgagaactaaatatattttgaagatagac
ttgagaagatttcctgatgaatcaggtgggagtcaaggatga

>gi568815592f:25661963_25879185|GENSCAN_predicted_peptide_2|55_aa
MIVTVKSFQYILAKLPDDAPSKTPAGTAKEDKGKAKKTALTAAEKAKDLDLGGRE

>gi568815592f:25661963_25879185|GENSCAN_predicted_CDS_2|168_bp
atgattgtaactgtgaagagttttcaatatatcttggccaagctgccagatgatgcacct
tccaaaacacctgctgggacagccaaggaagacaaggggaaggcaaagaagacagcactg
acagctgcggagaaggccaaggacctagatttaggaggacgagagtga

>gi568815592f:25661963_25879185|GENSCAN_predicted_peptide_3|132_aa
MLVAGFKVEEEAKECRQPLEPEKGKGKDSPREPPEGMRPCRQLEFCPACSTEERKRDFEK
IFAYYDVSKTGALEGPEVDGFVKDMMELVQPSISGVDLDKFREILLRHCDVNKDGKIQKS
ELALCLGLKINP

>gi568815592f:25661963_25879185|GENSCAN_predicted_CDS_3|399_bp
atgctagttgctggctttaaagtggaagaagaggctaaagaatgtaggcagcctctagaa
cctgaaaaaggcaagggaaaggattctccccgagaacctccagaaggaatgaggccgtgt
cgacagcttgaattttgcccagcttgttctactgaagaaaggaaaagggactttgagaaa
atctttgcctactatgatgttagtaaaacaggagccctggaaggcccagaagtggatggg
tttgtcaaagacatgatggagcttgtccagcccagcatcagcggggtggaccttgataag
ttccgcgagattctcctgcgtcactgcgacgtgaacaaggatggaaaaattcagaagtct
gagctggctttgtgtcttgggctgaaaatcaacccataa

>gi568815592f:25661963_25879185|GENSCAN_predicted_peptide_4|315_aa
MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYKVLKQVHPDTGISSKA
MSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLLPGELAKHAVSEGTKAV
TKYTSSKQQQAHGRLDLPGGDGRALVIMRQAGSLTGNALKNVTNKRIHDTHGLGRDSSVR
VDLLQQLVDVNRIALFAASLALFVLLRVLATAFLKPFSEMGNSGEGYALFIQRGSAVPRG
RCQRAAQQGQRCREGRGLHASVPAGGSGVPGLRHPGVGGQRRRNKKKTRIIPRHLQLAIR
NDKELDKLLARVTMA

>gi568815592f:25661963_25879185|GENSCAN_predicted_CDS_4|948_bp
atgccggaggtgtcatctaaaggtgctaccatttccaagaagggctttaagaaagctgtc
gttaagacccagaaaaaggaaggcaaaaagcgcaagaggacccgtaaggagagttattct
atttacatctacaaagtgctaaagcaggtccatccggacactggcatctcttcgaaagct
atgagcattatgaattccttcgtcactgatatctttgagcgtatagcgagcgaggcatca
cgtttggctcactacagcaagcgctccaccatttcttccagagagattcagacagcagtg
cgcttgctactgccgggagagctggctaaacatgctgtgtctgagggcaccaaggctgtc
actaagtacaccagctccaagcagcagcaggcgcacggccgtctggatctccctggaggt
gatggtcgagcgcttgtcataatgcgccaggcgggaagcctcacaggcaatgcgctcaaa
aatgtcactaacaaaagaattcatgatactcatggccttggaagagattccagtgtccgc
gtggacctgcttcagcagcttgtagatgtaaatagaatagctctctttgcggcatctctt
gcgctttttgtcctccttcgagttttagcaactgccttcttaaagcccttttcggaaatg
ggaaactcgggggaagggtacgcgctattcattcagagaggttctgcagttccccgtggg
cggtgtcaacgggctgctcagcaagggcaacgatgccgagagggtcgggggctgcacgct
agcgtacctgccggcggttctggagtacctggcctccgacaccctggagttggcgggcaa
cgccgtcggaacaagaagaagacccgcatcatcccgcgccacctgcagctggccatccgc
aacgacaaggagctcgacaagctgctggcccgagtgacaatggcttag

>gi568815592f:25661963_25879185|GENSCAN_predicted_peptide_5|185_aa
MDLNYTLEQIDLTDIYRTLYPTTAEYTFYSSAHGTFSKTDHMIGHKTSLNKFKEIEIISS
TPSDHSRIKLEINSKRNSQSCANTWKLNKLLLNDHWLNNEIKMKIKKFFELNDNRDITYQ
NLWDTAKAVLRGKFIPLNAYIKKSERAQIDNLSLHLKELEKQEQTKPKPSRRKEITKIRA
KLSGN

>gi568815592f:25661963_25879185|GENSCAN_predicted_CDS_5|558_bp
atggacttaaactataccctagaacaaatagacttaacagatatttacagaacactctac
ccaacaactgcagaatatacattctattcatcagcacatgggacattctccaagacagac
catatgataggccacaaaacaagtctcaacaaatttaaggaaatcgaaattatatcaagt
actccctcagaccacagcagaataaaattggaaatcaactccaaaaggaactctcaaagc
tgtgcaaatacatggaaattaaataagctgctcctaaatgatcattggctcaacaatgaa
atcaagatgaaaattaaaaaattctttgaactgaacgacaaccgtgacataacctatcaa
aacctctgggatacagcaaaagcggtgctaagaggaaagttcataccattaaatgcctac
atcaaaaagtctgaaagagcacaaatagacaatctaagtttacacctcaaggaactagag
aaacaagaacaaaccaaacccaaacccagcagaagaaaagaaataaccaagatcagagca
aaactaagtggaaattga

>gi568815592f:25661963_25879185|GENSCAN_predicted_peptide_6|434_aa
MSTGPDVKATVGDISSDGNLNVAQEECSRKGFCSVRHGLALILQLCNFSIYTQQMNLSIA
IPAMVNNTAPPSQPNASTERPSTDSQGYWNETLKEFKAMAPAYDWSPEIQGIILSSLNYG
SFLAPIPSGYVAGIFGAKYVVGAGLFISSFLTLFIPLAANAGVALLIVLRIVQGIAQVMV
LTGQYSIWVKWAPPLERSQLTTIAGSGSMLGSFIVLLAGGLLCQTIGWPYVFYIFVSYFC
EYWLFYTIMAYTPTYISSVLQANLRDSGILSALPFVVGCICIILGGLLADFLLSRKILRL
ITIRKLFTAIGVLFPSVILVSLPWVRSSHSMTMTFLVLSSAISSFCESGALVNFLDIAPR
YTGFLKGLLQVFAHIAGAISPTAAGFFISQDSEFGWRNVFLLSAAVNISGLVFYLIFGRA
DVQDWAKEQTFTHL

>gi568815592f:25661963_25879185|GENSCAN_predicted_CDS_6|1305_bp
atgtctaccggaccagatgtcaaggctacagtgggggacatttccagtgatggcaattta
aacgtggctcaagaggaatgctccaggaaaggtttttgttcagtccgacatgggctggcc
ctcatcttgcagctctgtaatttttcaatttacacccaacaaatgaacttgagcattgcc
atcccagctatggtgaacaacacagccccacctagccagcccaatgcttccacagaacgg
ccctccactgactcccagggctactggaatgaaactctaaaagaatttaaagcaatggcc
cctgcatatgactggagtcctgaaatccagggaatcatcctcagctccctcaactatggc
tcattcttggctccaatccccagtggctatgtggctggaatatttggagccaagtatgtg
gttggtgctggcttgtttatttcctcattcctgaccctcttcattccactggcagctaat
gcgggagtggccttgctcattgtcctccggattgtacaaggcatagcccaggttatggta
ttaactggtcagtattcaatttgggtcaaatgggctcccccactggaaaggagtcaactc
accaccattgctggatcagggtcaatgctggggtccttcattgttctacttgctggtggt
ctcctctgccagaccataggatggccttacgtcttctatatctttgtctcttatttctgt
gaatactggcttttttataccattatggcgtacacaccaacgtacatcagctcggtactt
caagccaacctcagagatagtgggatcctgtctgccttgccgtttgttgttggatgtatc
tgcattatccttggaggtctactggcagactttcttctctccagaaaaatcctcagactc
atcaccatcaggaaactcttcactgccattggggttctcttcccatccgtgatcctcgtg
tccctgccctgggtcagatccagccacagcatgaccatgaccttcttggtgctgtcttct
gccatcagcagcttctgtgaatcaggagcccttgttaacttcttggatattgctcctcgg
tacactggctttctcaaaggactattgcaagtctttgcacacatagctggagccatctct
cctactgctgctggatttttcatcagtcaggattcagagtttggttggagaaatgtcttc
ttgctttcagctgctgttaacatatcgggcctggttttctacctcatctttggccgagca
gatgtgcaggactgggctaaagagcagacattcacccacctctga

>gi568815592f:25661963_25879185|GENSCAN_predicted_peptide_7|211_aa
MGQLLAFLRNLGVRGSDFPPEEQGRKTLTTAFEVDKTSPFCWTRGYMRVSHGLDAGHRGL
IARPKGPPRREKGYPQREICVEWICDAKEMGSWKNQVHFLPCQPLMHEEKGGVRGGVSIL
ADEEKSQTEESAHTPLPEGEDPHQDHADPTSFICIKELNEDLSRNLCYKTRAFLLISETF
QFNVDKILPHPPPCQAFQSRNKHSLVAKAKI

>gi568815592f:25661963_25879185|GENSCAN_predicted_CDS_7|636_bp
atgggtcagctgttggctttcctgaggaatctgggagtgaggggctctgattttccaccc
gaggaacaaggcagaaagacactgaccactgcatttgaagtggacaagacctctccattt
tgttggaccagaggctacatgcgtgtttcccatggattagatgcaggtcacagaggactg
atagccaggcccaagggaccacctagaagggagaagggatatccacaaagggagatttgt
gtggagtggatctgtgatgccaaggagatgggcagctggaaaaaccaagtgcatttcctg
ccttgtcagcctcttatgcatgaagaaaagggaggggtcagaggtggggtcagcatccta
gcggatgaggagaaaagccagacagaagaaagtgctcacacccctctccctgaaggagaa
gacccccatcaggatcatgctgacccaacatccttcatttgcataaaggaactgaatgag
gacctgagcaggaacctttgctataaaaccagagccttccttttgatctctgaaacgttt
caatttaatgtggacaaaatcctaccccatcctcctccttgtcaagctttccaatctcgt
aataaacactctttagttgctaaagccaaaatctag

>gi568815592f:25661963_25879185|GENSCAN_predicted_peptide_8|885_aa
MATKTELSPTARESKNAQDMQVDETLIPRKVPSLCSARYGIALVLHFCNFTTIAQNVIMN
ITMVAMVNSTSPQSQLNDSSEVLPVDSFGGLSKAPKSLPAKAPVYDWSPQIQGIIFGAVG
YGGILTMAPSGYLAGRVGTKRVVGISLFATSFLTLCIPLATDFGIVLLIVTRIVQGLSQS
SILGGQFAIWEKWGPPQERSRLCSIALSVDLIEIAISDDPGAPLQTVLVDGIAQLIRVIS
HTLLPLKAVGDRLAGSLPSSALIVSLPYLNSGYITATALLTLSCGLSTLCQSGIYINVLD
IAPRNYKSEMEKKIKEKNANVQYRRPEFRPNASVRACGWKTTSQDRMPTSKKGQKKKCPH
ITEMKESGVSLHSLTTFASQSPVFSFCMAQTLIFACRQFGQERTPWFQSSNISILLNNQT
IQVPLVASVSSSSTRTKRALHLIPLVTGLSISDALGTGIASFCSFRYGLSFLVHCCNVII
TAQRACLNLTMVVMVNSTDPHGLPNTSTKKLLDNIKNPMYNWSPDIQGIILSSTSYGVII
IQVPVGYFSGIYSTKKMIGFALCLSSVLSLLIPPAAGIGVAWVVVCRAVQGAAQGIVATA
QFEIYVKWAPPLERGRLTSMSTSGACGCAVCLLWFVLFYDDPKDHPCISISEKEYITSSL
VQQVSSSRQSLPIKAILKSLPVWAISTGSFTFFWSHNIMTLYTPMFINSMLHVNIKENGF
LSSLPYLFAWICGNLAGQLSDFFLTRNILSVIAVRKLFTAAGFLLPAIFGVCLPYLSSTF
YSIVIFLILAGATGSFCLGGVFINGLDIAPRYFGFIKACSTLTGMIGGLIASTLTGLILK
QDPESAWFKTFILMAAINVTGLIFYLIVATAEIQDWAKEKQHTRL

>gi568815592f:25661963_25879185|GENSCAN_predicted_CDS_8|2658_bp
atggccaccaagacagagttgagtcccacagcaagggagagcaagaacgcacaagatatg
caagtggatgagacactgatccccaggaaagttccaagtttatgttctgctcgctatgga
atagccctcgtcttacatttctgcaatttcacaacgatagcacaaaatgtcatcatgaac
atcaccatggtagccatggtcaacagcacaagccctcaatcccagctcaatgattcctct
gaggtgctgcctgttgactcatttggtggcctaagtaaagccccaaagagtcttcctgca
aaggctcctgtgtatgactggtctcctcaaatccaaggcatcatctttggtgctgttggc
tatggtggcatactgacaatggctcccagtggatacctggctggaagagtaggaacaaag
cgagtggttggcatttctttgtttgcaacttcatttctcactctatgcatccctctggcc
actgactttggaatagtcttgctcattgtaactcgaatagtccagggcctaagccagtcc
tcaatacttgggggtcagtttgcaatttgggaaaagtggggccctccacaagaacgaagc
agactctgcagcattgctttatcagtagatcttatagaaattgccatttctgatgatcct
ggggctcctctgcagactgtactggtggatggaattgctcagcttataagggtaatcagt
catactctgctgccattgaaggcagtaggggataggcttgcaggaagtctcccctcttca
gcactcattgtgtctctgccttacctcaattccggctatatcacagcaactgccttgctg
acgctctcttgcggattaagcacattgtgtcagtcagggatttatatcaatgtcttagat
attgctccaagaaactataagagtgaaatggagaaaaagataaaggagaaaaatgcaaat
gttcagtaccgcagacctgagtttagaccaaatgcctcagtaagagcctgtggatggaaa
accacaagccaagacagaatgccaacatctaagaagggccaaaaaaagaaatgcccacac
ataacagagatgaaagagtcaggtgtctcgctacattcacttacaacttttgcctctcaa
tccccggtcttttctttctgtatggcacaaactcttatctttgcttgccggcaatttggt
caagaacgtacaccctggtttcaatcttcaaacattagcattttgctaaacaaccagacc
atccaggttcctttggtagcttctgtttcatcttcctccacacgcactaagcgggctcta
catcttattcctctggtaacaggattaagcatctcagatgcacttggcactggaatagca
agtttctgttcctttcgctatggattgtctttccttgtgcactgttgtaatgttataata
acagcacagcgtgcgtgcctgaacctcacaatggtagtcatggtgaatagcacagatcca
catggtttgcccaacacctccacaaagaagctcctggataatataaagaaccctatgtat
aattggagcccagatatccagggaatcatcttgagttccacctcctatggtgtcatcatc
atccaagttcctgttggatacttctctggaatatattctacaaagaaaatgattggcttt
gcattatgcctcagctctgtgttaagcctgctcatcccaccagcagctggaattggagta
gcttgggtcgttgtatgtcgagcagttcagggagcagcccaggggatagttgcaacagcc
cagtttgaaatatatgtcaaatgggctcctcccctggaacgaggccgacttacttctatg
agtacatcaggtgcttgtggctgtgccgtatgtcttctctggttcgttctgttttatgat
gaccccaaagaccacccatgtataagcatcagtgaaaaggaatacatcacatcctccctg
gtccagcaggtcagttcaagtagacaatctctgcctatcaaggctatacttaagtcgctt
ccagtctgggctatttccactggtagttttacgtttttctggtcacataacatcatgaca
ctatacactccaatgtttatcaactccatgcttcatgttaatataaaagagaatgggttc
ttgtcttcccttccctatttgtttgcctggatctgtggtaacctagcaggtcagttatca
gacttcttcctgaccaggaatattctcagcgtaattgctgtccggaaactcttcacagca
gcaggatttctccttcctgcaatctttggtgtctgcctgccttacctgagttccaccttc
tacagcattgtcattttcctaatacttgctggtgcaacaggcagcttttgcttgggtgga
gtgtttataaatggcttggatattgctcccagatattttggatttattaaagcatgttca
actttaactggaatgataggaggactaattgcttccactttgactggattgatccttaag
caggatccggaatccgcctggtttaaaaccttcatcctgatggcagccattaatgtgact
ggcctaattttctaccttatagttgctacagcagaaattcaggactgggctaaagaaaaa
caacacacacgtctctga

>gi568815592f:25661963_25879185|GENSCAN_predicted_peptide_9|122_aa
MVGFLFLRLNEDPKKRNETTKQTYPSMPTYHLLLTLVTVPLPHLSISSSIPSHFSLVKFH
TNSLDLDAAFLQMLSWTRATLAIGIIEIIIIATLINYCTSQSTSIPDGDITDPLPPGHPV
GK

>gi568815592f:25661963_25879185|GENSCAN_predicted_CDS_9|369_bp
atggttggctttttgtttctaaggttaaatgaagatcctaaaaagagaaatgaaacaacc
aaacagacatatccaagtatgcccacctaccatcttctgctgactctggtgactgtccca
ttgcctcatctctccatttcctcttctatccctagccattttagtttggttaaatttcac
accaactcactggatcttgatgcagcatttctccagatgctttcttggaccagagccacc
ctagccattggtataatagaaataattattattgccactcttataaattactgcaccagc
cagtctacatcaatcccagatggagatattactgaccctcttcctccaggtcacccagtt
ggtaaatga