GENSCAN 1.0	Date run:  8-Nov-116	Time: 03:44:17

Sequence gi568815592f:1510446_1712104 : 201659 bp : 47.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4795   4888   94  0  1   81  101    64 0.123   7.59
 1.02 Intr +  13178  13364  187  0  1   66   58   153 0.427   8.85
 1.03 Term +  26242  26332   91  1  1   87   47    71 0.019   0.09
 1.04 PlyA +  26862  26867    6                               1.05

 2.04 PlyA -  27338  27333    6                               1.05
 2.03 Term -  27919  27792  128  2  2   40   46   162 0.880   5.64
 2.02 Intr -  36190  36133   58  1  1   53   92    58 0.491   1.16
 2.01 Init -  37533  37435   99  0  0  116   45    47 0.276   3.55
 2.00 Prom -  54951  54912   40                              -4.16

 3.00 Prom +  65034  65073   40                              -4.06
 3.01 Init +  66280  66418  139  0  1   87   41    54 0.180   0.91
 3.02 Term +  70971  71341  371  1  2   63   39   303 0.440  17.71
 3.03 PlyA +  72823  72828    6                               1.05

 4.00 Prom +  79998  80037   40                              -4.46
 4.01 Init +  84920  85132  213  1  0   89   72    93 0.251   6.34
 4.02 Term +  88344  88553  210  2  0   76   48   175 0.964   9.59
 4.03 PlyA +  89750  89755    6                               1.05

 5.00 Prom +  90800  90839   40                              -4.86
 5.01 Init +  91922  91935   14  1  2   90   83     5 0.078  -0.73
 5.02 Intr +  94326  94530  205  0  1   27   74   138 0.168   5.50
 5.03 Intr +  96124  96252  129  0  0  134   94     7 0.176   6.79
 5.04 Term +  98635  98715   81  0  0   75   47    77 0.050  -0.01
 5.05 PlyA +  99425  99430    6                              -0.45

 6.00 Prom +  99435  99474   40                              -9.46
 6.01 Sngl + 100001 101662 1662  1  0   95   47  2816 0.999 273.43
 6.02 PlyA + 101897 101902    6                               1.05

 7.02 PlyA - 101950 101945    6                               1.05
 7.01 Sngl - 108817 108404  414  1  0   79   43   229 0.714  13.80
 7.00 Prom - 111585 111546   40                              -4.06

 8.05 PlyA - 112460 112455    6                               1.05
 8.04 Term - 113786 113724   63  2  0   97   53   118 0.099   7.09
 8.03 Intr - 114095 114027   69  2  0  132   76    77 0.152  10.28
 8.02 Intr - 114270 114177   94  2  1    5   56    77 0.069  -3.83
 8.01 Init - 115793 115729   65  2  2   72   13   142 0.064   5.72
 8.00 Prom - 122771 122732   40                              -2.46

 9.00 Prom + 125367 125406   40                              -7.36
 9.01 Init + 126233 126411  179  1  2   94   78   189 0.962  15.27
 9.02 Intr + 127380 127423   44  0  2   80  119    -1 0.432   0.08
 9.03 Intr + 130850 131017  168  0  0   67   77    86 0.529   5.32
 9.04 Intr + 147868 148011  144  2  0   52   94    76 0.016   4.85
 9.05 Term + 151174 151292  119  2  2   70   53    38 0.004  -2.80
 9.06 PlyA + 152434 152439    6                               1.05

10.00 Prom + 156112 156151   40                              -0.66
10.01 Init + 160368 160377   10  2  1   93  114     9 0.787   3.73
10.02 Term + 165600 166177  578  1  2  -14   37   260 0.097   5.33
10.03 PlyA + 166252 166257    6                               1.05

11.00 Prom + 167029 167068   40                              -2.46
11.01 Init + 167153 167285  133  1  1   66   47    84 0.325   2.40
11.02 Intr + 170799 170903  105  1  0   78   44    66 0.341   1.39
11.03 Intr + 170944 171063  120  2  0   78   94    53 0.593   5.37
11.04 Intr + 180765 180844   80  1  2   64   99    62 0.068   4.17
11.05 Intr + 189228 189320   93  2  0  120   75    12 0.515   3.26
11.06 Intr + 198511 198620  110  0  2   89   96   -28 0.006  -2.82
11.07 Term + 199800 199938  139  0  1   68   34   112 0.015   1.24
11.08 PlyA + 201106 201111    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 113786 113561  226  0  1   97   68   188 0.839  14.74


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_1|123_aa
MSRSSWFMGPSCRDVATFIPGLELLLHTDLHGVSSLNKKRNVLDGWSWALTGNEREPLFR
TQATLRQPLSGCPEVMSWWSVEHTGKSSRQTSSRCSFHLTAADSRAVSVDPSDIPLQPLW
DLP

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_1|372_bp
atgagcagatccagctggttcatgggtccctcatgcagagacgttgccacgttcatcccg
gggctggagctgctgcttcacactgacttacacggggtgtctagtttgaacaagaaaagg
aatgttctggatggctggtcctgggcgctcaccgggaatgaacgtgagccactctttcgc
acacaggccactctgcgtcagccactctcgggctgccccgaagtgatgtcctggtggtcc
gtggagcacacaggaaagtccagcagacaaacatcatcaaggtgcagctttcacctcaca
gcagccgacagccgggctgtctctgtagacccgtctgacattcctctgcagccgctgtgg
gacttgccctga

>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_2|94_aa
MALSRVGFRFPVTCKGSHTIHVPVEYNLAGSEKLQSQQQQEFNEGRLCARYYSQIIDEYG
MDVGHGGSEKTNPTNCLTNKGKLILGNESTIHIC

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_2|285_bp
atggcgctgagcagggtggggtttagattcccagtcacgtgtaaaggcagtcacaccatc
cacgtgccagtggagtacaacttggcaggcagtgagaagctacaatctcaacagcaacaa
gaatttaatgagggccgattatgtgcaagatactatagccagattattgatgagtatggg
atggatgtgggccacggaggctctgagaagaccaacccaaccaactgtttgaccaacaaa
gggaaactcatcttaggaaatgaatccacgattcacatctgctaa

>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_3|169_aa
MGKQTDPKWSCLAFREFCWFFEKGELVATIESPGFLLLSVDWKMRLQPCLKPLSLTTKLL
ADRKHDSTGALHWKRDRPEKKTAHRDRELGHTLVKVYEGGITAMWSHYSGRTWATRSSVT
VLPGVYIVGNVHDSVPACDPIISHPGTHFTEMHAQAQQHRMGELHRASS

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_3|510_bp
atgggaaagcaaacagacccaaaatggtcgtgtttggccttcagggaattttgttggttc
tttgaaaaaggtgaattagtcgccaccattgaaagtcccggtttcctgctcctctccgtg
gattggaaaatgaggcttcagccatgcctgaagccactgtccctgaccacaaagcttttg
gctgataggaagcatgacagcactggggccctacactggaagcgggaccgtccagagaag
aagactgcgcacagggatcgggagctgggacacacgttagtcaaggtgtacgagggagga
atcaccgccatgtggagccactactcggggaggacgtgggccacccggagctcagtgaca
gtactcccgggagtgtacatcgttggtaatgtccacgacagtgtccctgcctgtgaccca
ataatttcccatccagggacacacttcacagaaatgcacgcacaggcacaacagcatcga
atgggagagctgcacagagcctcttcatag

>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_4|140_aa
MVGKCLPADWGSPGAPSAQGCSSGWPRGRAGRGTPGQGGRLFLDPSGRLPPLQRVRAPRV
YFQFRSAALSRASCLHFIVCIILDLLQKEKWPFTAFTECGQKLDRADIELRTEMENIQGE
HAHSTPTLPQRSEPQRWPHT

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_4|423_bp
atggtcggaaagtgtctgccagcagactggggatccccaggggccccatcagcccagggc
tgctcctcaggatggccgcggggccgtgccggccggggcacaccaggccagggtgggcgg
ctgttcctggaccccagcgggcgtctgcctcccctacagcgggtccgggcaccccgggtc
tacttccagttcagaagcgcagcactgagtagggcatcctgcctgcacttcatcgtgtgt
attattttggatttgcttcagaaagaaaaatggcctttcacggcgtttacggaatgtggg
cagaaattggaccgggcagacatagagctccgcacagagatggaaaatattcagggtgaa
cacgcacactcgacacccacgctcccgcagagaagcgagccccagcgctggccccacacc
tga

>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_5|142_aa
MVSWRRRPTREDQRFPEASALRSSGEAGCTEPGVGLVPVLRGANTGPGPGPRGSCPEGSE
LGADRALPAGGPALLGQVEPPLKLVSTCPRLPTAAHSSAFRAEPRAQRMEKPESGEAAKG
RPPGEGGEKQGGPQRGGLILRG

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_5|429_bp
atggtgtcctggaggcgccgacccactcgcgaggaccagcggttcccggaggcgtcggcc
ctcaggtcctcgggggaggccggctgcaccgagccgggtgtcggccttgtccctgtcctg
agaggtgcaaacaccggccccggcccaggcccccggggctcctgcccagaaggctcagag
ctgggggccgaccgcgccttacccgcaggaggcccggcgctcctgggccaggtggagccc
cccctgaagctggtttctacctgccctcgcctccccactgcagcccacagttcggctttc
agggctgaacccagagcccagaggatggagaagccagaaagcggggaggccgccaagggc
cggccccccggggaggggggcgagaagcagggcggcccgcagcggggcgggctcatcctt
cgcgggtga

>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_6|553_aa
MQARYSVSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGM
ARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQ
GWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAV
KDKEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPL
SPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAP
PPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSL
YSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAG
GSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTSWYLNQAGG
DLGHLASAAAAAAAAGYPGQQQNFHSVREMFESQRIGLNNSPVNGNSSCQMAFPSSQSLY
RTSGAFVYDCSKF

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_6|1662_bp
atgcaggcgcgctactccgtgtccagccccaactccctgggagtggtgccctacctcggc
ggcgagcagagctactaccgcgcggcggccgcggcggccgggggcggctacaccgccatg
ccggcccccatgagcgtgtactcgcaccctgcgcacgccgagcagtacccgggcggcatg
gcccgcgcctacgggccctacacgccgcagccgcagcccaaggacatggtgaagccgccc
tatagctacatcgcgctcatcaccatggccatccagaacgccccggacaagaagatcacc
ctgaacggcatctaccagttcatcatggaccgcttccccttctaccgggacaacaagcag
ggctggcagaacagcatccgccacaacctctcgctcaacgagtgcttcgtcaaggtgccg
cgcgacgacaagaagccgggcaagggcagctactggacgctggacccggactcctacaac
atgttcgagaacggcagcttcctgcggcggcggcggcgcttcaagaagaaggacgcggtg
aaggacaaggaggagaaggacaggctgcacctcaaggagccgcccccgcccggccgccag
cccccgcccgcgccgccggagcaggccgacggcaacgcgcccggtccgcagccgccgccc
gtgcgcatccaggacatcaagaccgagaacggtacgtgcccctcgccgccccagcccctg
tccccggccgccgccctgggcagcggcagcgccgccgcggtgcccaagatcgagagcccc
gacagcagcagcagcagcctgtccagcgggagcagccccccgggcagcctgccgtcggcg
cggccgctcagcctggacggtgcggattccgcgccgccgccgcccgcgccctccgccccg
ccgccgcaccatagccagggcttcagcgtggacaacatcatgacgtcgctgcgggggtcg
ccgcagagcgcggccgcggagctcagctccggccttctggcctcggcggccgcgtcctcg
cgcgcggggatcgcacccccgctggcgctcggcgcctactcgcccggccagagctccctc
tacagctccccctgcagccagacctccagcgcgggcagctcgggcggcggcggcggcggc
gcgggggccgcggggggcgcgggcggcgccgggacctaccactgcaacctgcaagccatg
agcctgtacgcggccggcgagcgcgggggccacttgcagggcgcgcccgggggcgcgggc
ggctcggccgtggacgaccccctgcccgactactctctgcctccggtcaccagcagcagc
tcgtcgtccctgagtcacggcggcggcggcggcggcggcgggggaggccaggaggccggc
caccaccctgcggcccaccaaggccgcctcacctcgtggtacctgaaccaggcgggcgga
gacctgggccacttggcgagcgcggcggcggcggcggcggccgcaggctacccgggccag
cagcagaacttccactcggtgcgggagatgttcgagtcacagaggatcggcttgaacaac
tctccagtgaacgggaatagtagctgtcaaatggccttcccttccagccagtctctgtac
cgcacgtccggagctttcgtctacgactgtagcaagttttga

>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_7|137_aa
MTSTATVRPGLGRVCPLRVIIIKIIGIARKPLAPAPQPLLSWVSRLRKDPAAGPDPRVEH
RAADPAGPTGLARGSGDRPRRALLRTVWDADFANLEDNFCFHSTSRFLKIQSPLKRASHP
SGLFVAFDEPRHSLRDQ

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_7|414_bp
atgaccagcacagccactgtgaggcccggccttggccgcgtttgtcctttgcgagtgata
ataataaaaatcattggaattgcaaggaagcccctggccccggctccccagccgctgctg
tcctgggtgtcccggctgcggaaagaccccgcagccgggcccgacccacgagtggaacac
cgggctgcggacccagccgggcctacaggactggcgcggggctccggggacaggcctcgc
agggccctcctgcgcaccgtctgggacgccgattttgccaacttggaggacaatttttgt
tttcactctaccagcagatttttaaaaatccagtcgccgctgaaacgtgcttcccacccg
tccggtttgtttgtagcctttgacgagccccggcacagcctccgggaccaatga

>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_8|96_aa
MDDENDSESRCVYCCSPIASPRDLRRREPQLNAHSRDRKQGNPEPCAPRGSGTDFLQGDC
TKAKQKLNWKPRVAFDELVREMVHADVELMRTNPNA

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_8|291_bp
atggatgatgagaacgacagcgagagtcgctgcgtgtactgctgcagccccattgcaagc
ccacgtgatttacggcgccgagagccgcaactgaacgcgcacagcagggaccgaaagcag
ggaaacccggagccttgtgcgcccagagggagcggaacggactttctgcagggcgactgc
accaaagcgaaacagaagctgaactggaagccccgggtcgctttcgatgagctggtgagg
gagatggtgcacgccgacgtggagctcatgaggacaaaccccaatgcctga

>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_9|217_aa
MSLGLGALAATQAALTTLRLCPCKFDSYPYQWAPEGLPMPHLPKVLCRNGNGVEGSREES
LLTVLRGRQGNGGAGTIYVTVTLVKINGEKYALPAGGTQKVPWSSTACVSEWTGKKLYLL
PVKGGKYLVEAEAAICEVAFSRRLSHLGLAEEHKSIIPPTAGIRPCAHTAQRSAYLCPAS
GTVAAGDLLTGCPRTLPGSSSTTFQPKRVSKSLTESE

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_9|654_bp
atgagcctaggattgggggcactggctgccacacaggcagcccttaccacgctacggtta
tgtccttgcaagtttgattcttacccgtaccagtgggccccggaaggtctgcccatgcct
cacctgcccaaggttctgtgcaggaatgggaatggcgtggaaggcagcagggaggagagc
cttctaacagtcctacgaggtaggcaaggaaacggcggtgctgggacaatctatgtcact
gtcacgttagtgaagataaatggagagaaatatgccctgccagctggtggcactcagaaa
gtgccatggagcagcacagcctgcgtctcagaatggacaggaaaaaagctttatcttctt
cctgtcaaaggagggaaataccttgtggaagctgaagctgcaatttgcgaagtcgcattt
tcccgaaggctttcccacctgggccttgctgaggaacataagagtatcatcccaccgact
gctggcattcggccctgcgcccacacagcccagcgctctgcctacctgtgtccagcaagt
gggactgtggctgcaggagatctgctgacaggctgtccgaggaccctgcccggatcttcc
tcaaccacgttccaacccaaaagagttagtaagagtctgacagagagcgagtga

>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_10|195_aa
MASAQNLLKLISNCSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGI
QLTRNVKDLFKENYKPLLSKIKEDTNKWKNIPCSWIGRINIVKMATLPKVIYRFNAIPIK
LPMTFFIELEKTTLNFIWNQKRARIAKTILSKKNKAGGITLPDFKLYCKATVTKTACYWY
QNRDIDQWNRIESLK

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_10|588_bp
atggcctcggcccaaaatctcctcaagctgataagcaactgcagcaaagtctcaggatac
aaaatcaatgtgcaaaaatcacaagcattcttatacaccaataacagacaaacagagagc
caaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacttaggaatc
caacttacaaggaatgtgaaggacctcttcaaggagaactacaaaccactgctcagcaaa
ataaaagaggacacaaacaaatggaagaacattccatgctcatggataggaagaatcaat
atcgtgaaaatggccacactgcccaaggtaatttatagattcaatgccatccccatcaag
ctaccaatgactttcttcatagaattggaaaaaactactttaaacttcatatggaaccaa
aaaagagcccgcattgctaagacaatcctaagcaaaaagaacaaagctggaggcatcaca
ctacctgacttcaaactatactgcaaggctacagtaaccaaaacagcatgctactggtac
caaaacagagatatagaccaatggaacagaatagagtccctgaaataa

>gi568815592f:1510446_1712104|GENSCAN_predicted_peptide_11|259_aa
MEYFAAIKKDEFMSFAGTWMKLETIILSKRSQGQKTKHRMFSLIVSCHPAAKTRWYLLGC
DKSFCLAAMGDILLQILLHASTVPKWLKKKVVLQRSESEVVRNYESSAIQDKMEISVAPG
TSMKLEAITLSKLMQEQKTKHHMFSLDLVVTIRAPWKIQDHLQTLHSIPFAKSLDYHKIP
QSLHTWCLCHWKRGCSCLMSPDCREPCTLTQLHRPGKTFVYVYIPEKLNHITAENTADLL
INLVKKPITLIDQMPKTAS

>gi568815592f:1510446_1712104|GENSCAN_predicted_CDS_11|780_bp
atggaatactttgcagccataaaaaaggatgagttcatgtcttttgcagggacatggatg
aagctggaaaccatcattctgagcaaacgatcgcaaggacagaaaaccaagcaccgcatg
ttctcactcatagtgtcctgccaccctgccgccaagacacgctggtacttgttgggctgt
gataaaagcttctgcttggctgccatgggtgacatcttactacagattctgttacatgca
tctacagtcccaaaatggctcaagaagaaagtggtcctacagaggtcagaatctgaggtt
gtaagaaattatgaaagctctgccattcaggacaagatggaaatcagtgtggctccaggg
acatcgatgaagctggaagccattaccctcagcaaactaatgcaggaacagaaaaccaaa
caccacatgttctcactcgaccttgtggttaccattagggctccctggaaaatccaggac
catctccagacccttcactcaatcccatttgcaaagtctctggattatcataaaatccct
caaagccttcatacctggtgcctgtgtcactggaaaagagggtgcagctgtctgatgtcc
cctgattgccgagaaccgtgtacactgactcagctccacagaccggggaaaacatttgtg
tatgtgtatattcctgagaagcttaaccacattactgctgagaacacagcagatctactc
atcaacttggtaaagaaaccaatcacactgattgatcagatgcctaaaacagctagttga