GENSCAN 1.0	Date run:  8-Nov-116	Time: 02:07:44

Sequence gi568815592f:1212705_1413913 : 201209 bp : 45.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3208   3373  166  1  1   68   27   117 0.316   3.56
 1.02 Term +   4854   4934   81  2  0  103   38    60 0.531   0.19
 1.03 PlyA +   5635   5640    6                               1.05

 2.04 PlyA -   6838   6833    6                               1.05
 2.03 Term -  13770  13685   86  1  2   68   48    67 0.305  -1.48
 2.02 Intr -  20236  20109  128  0  2   70  103    84 0.896   8.42
 2.01 Init -  26339  26098  242  2  2   74   70   104 0.583   4.55
 2.00 Prom -  34437  34398   40                              -3.86

 3.00 Prom +  35783  35822   40                              -4.26
 3.01 Init +  38646  38684   39  2  0   33   94    69 0.249   2.19
 3.02 Intr +  53281  53344   64  0  1   43   91    82 0.072   2.29
 3.03 Intr +  58796  58924  129  0  0  106   58    62 0.556   5.67
 3.04 Intr +  66324  66393   70  1  1   76   86    -3 0.120  -3.46
 3.05 Intr +  69240  69387  148  0  1   75   65    91 0.731   5.74
 3.06 Intr +  71424  71480   57  2  0   56   94    38 0.502   0.28
 3.07 Intr +  71604  71718  115  2  1   63   93    55 0.851   3.52
 3.08 Intr +  73654  73744   91  2  1   33   59    45 0.088  -4.85
 3.09 Intr +  83495  83672  178  2  1   16   89   119 0.408   4.72
 3.10 Term +  84954  85055  102  2  0   38   41    94 0.372  -2.02
 3.11 PlyA +  87267  87272    6                               1.05

 4.00 Prom +  91086  91125   40                              -3.46
 4.01 Sngl + 100001 101212 1212  1  0   88   48  1708 0.999 162.63
 4.02 PlyA + 102026 102031    6                               1.05

 5.00 Prom + 102519 102558   40                              -8.56
 5.01 Init + 105171 105224   54  2  0   94   46   104 0.398   6.10
 5.02 Intr + 111203 111465  263  1  2   83   33   144 0.105   4.69
 5.03 Intr + 123652 123749   98  1  2   49  111    42 0.012   2.25
 5.04 Term + 127380 127573  194  1  2   85   49    95 0.561   2.88
 5.05 PlyA + 128354 128359    6                               1.05

 6.00 Prom + 140272 140311   40                              -3.16
 6.01 Init + 153491 153577   87  1  0   75   68    60 0.776   3.34
 6.02 Term + 156340 156561  222  0  0   51   48   154 0.924   4.62
 6.03 PlyA + 157774 157779    6                               1.05

 7.03 PlyA - 159167 159162    6                               1.05
 7.02 Term - 161658 161645   14  1  2  117   44    -2 0.081  -3.34
 7.01 Init - 165988 165871  118  1  1   74   44   175 0.827  10.07
 7.00 Prom - 167475 167436   40                              -5.26

 8.00 Prom + 167794 167833   40                              -6.46
 8.01 Init + 169133 169232  100  1  1   60   66   161 0.931   9.52
 8.02 Term + 169849 169877   29  2  2   91   48    38 0.619  -1.66
 8.03 PlyA + 169967 169972    6                               1.05

 9.00 Prom + 175960 175999   40                              -5.06
 9.01 Init + 177244 178414 1171  0  1   57   97  2045 0.226 194.00
 9.02 Intr + 180551 180660  110  0  2   57   64   132 0.095   7.70
 9.03 Intr + 186916 186990   75  0  0   99  100    11 0.011   3.11
 9.04 Intr + 198533 198640  108  1  0   63   12   109 0.447   1.28
 9.05 Term + 199873 200052  180  0  0   41   35   197 0.573   7.31
 9.06 PlyA + 200273 200278    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:1212705_1413913|GENSCAN_predicted_peptide_1|82_aa
XSYLAKLTLAQSAVGKAGAKTGEAKEGFQCFRLLGSTPAAAVAAYPGPACIRLQRGPSGM
LSLRPHSLRMQNIPIGFSHFRD

>gi568815592f:1212705_1413913|GENSCAN_predicted_CDS_1|249_bp
nnctcctacttggccaaactcacactggcacagagcgcagtggggaaggctggagcgaaa
actggagaggccaaggaaggcttccagtgcttcaggcttctaggatctacaccagcagca
gcggtagcagcctacccaggtcctgcttgcatccgcctgcaacgtggaccatctggaatg
ctcagcctgagaccacactctctccgcatgcaaaacatccccatcggcttctcacacttc
agggactga

>gi568815592f:1212705_1413913|GENSCAN_predicted_peptide_2|151_aa
MEPKVRAPGIQGREGEVVPRGWHWAGPQDYAERGHSTLGKRCGGPSVHVGRLDNREKIDL
AGLKDVYGDGDTDLKATSVGEWEANPISMNNMDSLRVGGRCECSLQLPPVFEQLHSVVHN
SHTSDDLVSYLAERTEAVDTEPAHPCICFEY

>gi568815592f:1212705_1413913|GENSCAN_predicted_CDS_2|456_bp
atggagccaaaagtaagagctccaggtattcaggggagggagggagaagtcgtaccaaga
gggtggcactgggctgggcctcaggactatgcagagagagggcacagcaccctgggcaag
aggtgtgggggccccagtgtccacgtgggcagattggacaatcgtgagaagatcgacttg
gctggactcaaagatgtatatggcgatggggacacagacctaaaggccacatcagttgga
gagtgggaagcaaatcctatatccatgaacaacatggactctctcagggtaggtggacgc
tgtgaatgcagcctacagctgcccccagtttttgagcagttacacagtgtggttcataac
agccatacatctgatgatctggtttcttatttggctgagagaacagaagccgtggacaca
gagccagctcatccctgcatctgcttcgagtactga

>gi568815592f:1212705_1413913|GENSCAN_predicted_peptide_3|330_aa
MFARPLAVYEEWEATDLTLERAPPANTCDANRLADDEWNKESTEPKRRLSSQGLHLPRDW
GERCGLKVSTCRGTGENGLKKLLKMLQCIIYKPPHPTPNGGNYRFPVIALMMLISISLLS
LTLLVIRDKLKTLVLEGSDMRAIFTGEGLVKTWKKTTKDPSRKSPDNSQVIIVMVCTTII
VPYSPIARENTAVGEQFDSCVETAQIYFRKQLGRMNLRPSTELAHDVQGLLKGCEVAGQK
ILGAFQKDKGYRRLVRGTRQTARTAQNHFREYAYTHDLLSRPVKTCQHTGWFFCTGVTQD
IKQCKTMILRKESKGAEFYNCPGFLPDSDF

>gi568815592f:1212705_1413913|GENSCAN_predicted_CDS_3|993_bp
atgtttgccaggcccctggctgtctacgaggaatgggaggccactgaccttacactggaa
cgagcaccaccagcaaacacctgtgatgccaatcgtcttgcagatgatgaatggaacaaa
gagagcactgagccaaagcggaggctgtctagtcaaggtctccacctgccgcgggactgg
ggagaacggtgtggcctcaaggtctccacctgccgtgggactggggagaacggtctgaaa
aagctccttaaaatgcttcaatgtataatttacaagccccctcaccctacccccaatgga
ggaaattaccggtttcctgtgattgccctcatgatgctgatatcgatctccctgttgtct
ctcacacttttagttatcagggacaaacttaaaaccctagtcctcgagggcagtgacatg
agggctattttcactggggaaggactggtgaagacatggaagaaaactacaaaggatcct
tctcgcaagtccccagacaatagccaggtaataatagtaatggtctgtacaaccatcatt
gtaccttattcacccattgcaagagaaaatacagctgtaggtgaacagtttgacagttgt
gttgaaacagcccagatttacttcagaaaacaacttggaaggatgaatctcaggccatcc
acggagcttgcacatgatgtccagggccttctgaagggctgtgaagttgcaggacaaaag
atcttgggcgcattccagaaggacaagggataccgtagattagtacgaggaaccagacag
actgcccgcacagctcagaaccactttcgggagtatgcctacacacacgacttactgagc
agaccagtgaagacatgtcaacatacaggctggttcttctgcacaggtgtgacacaggat
atcaaacaatgtaagactatgatcctgagaaaagaaagcaaaggagctgagttttacaac
tgtcctggatttctgcctgacagcgacttttaa

>gi568815592f:1212705_1413913|GENSCAN_predicted_peptide_4|403_aa
MKLEVFVPRAAHGDKQGSDLEGAGGSDAPSPLSAAGDDSLGSDGDCAANSPAAGGGARDT
QGDGEQSAGGGPGAEEAIPAAAAAAVVAEGAEAGAAGPGAGGAGSGEGARSKPYTRRPKP
PYSYIALIAMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTGWRNSVRHNLSLNDCFVKV
LRDPSRPWGKDNYWMLNPNSEYTFADGVFRRRRKRLSHRAPVPAPGLRPEEAPGLPAAPP
PAPAAPASPRMRSPARQEERASPAGKFSSSFAIDSILRKPFRSRRLRDTAPGTTLQWGAA
PCPPLPAFPALLPAAPCRALLPLCAYGAGEPARLGAREAEVPPTAPPLLLAPLPAAAPAK
PLRGPAAGGAHLYCPLRLPAALQAASVRRPGPHLPYPVETLLA

>gi568815592f:1212705_1413913|GENSCAN_predicted_CDS_4|1212_bp
atgaagttggaggtgttcgtccctcgcgcggcccacggggacaagcagggcagtgacctg
gagggcgcgggcggcagcgacgcgccgtccccgctgtcggcggcgggagacgactccctg
ggctcagatggggactgcgcggccaacagcccggccgcgggcggcggcgccagagatacg
cagggcgacggcgaacagagtgcgggaggcgggccgggcgcggaggaggcgatcccggca
gcagctgctgcagcggtggtggcggagggcgcggaggccggggcggcggggccaggcgcg
ggcggcgcggggagcggcgagggtgcacgcagcaagccatatacgcggcggcccaagccc
ccctactcgtacatcgcgctcatcgccatggccatccgcgactcggcgggcgggcgcttg
acgctggcggagatcaacgagtacctcatgggcaagttcccctttttccgcggcagctac
acgggctggcgcaactccgtgcgccacaacctttcgctcaacgactgcttcgtcaaggtg
ctgcgcgacccctcgcggccctggggcaaggacaactactggatgctcaaccccaacagc
gagtacaccttcgccgacggggtcttccgccgccgccgcaagcgcctcagccaccgcgcg
ccggtccccgcgcccgggctgcggcccgaggaggccccgggcctccccgccgccccgccg
cccgcgcccgccgccccggcctcgccccgcatgcgctcgcccgcccgccaggaggagcgc
gccagccccgcgggcaagttctccagctccttcgccatcgacagcatcctgcgcaagccc
ttccgcagccgccgcctcagggacacggcccccgggacgacgcttcagtggggcgccgcg
ccctgcccgccgctgcccgcgttccccgcgctcctccccgcggcgccctgcagggccctg
ctgccgctctgcgcgtacggcgcgggcgagccggcgcggctgggcgcgcgcgaggccgag
gtgccaccgaccgcgccgcccctcctgcttgcacctctcccggcggcggcccccgccaag
ccactccgaggcccggcggccggcggcgcgcacctgtactgccccctgcggctgcccgca
gccctgcaggcggcctcagtccgccgccctggcccgcacctgccgtacccggtggagacg
ctcctagcctga

>gi568815592f:1212705_1413913|GENSCAN_predicted_peptide_5|202_aa
MGLRGQRALVTLRLPCLRACAVSQTQGEEASMVGPLLPPSSMKPSPPTGPFGNLCAQLED
GGMQKPGAVQSRSSHSAGSSSLPLSGGQTSRAAGPQYEYPLKSQAGVYLKPPPNLFVHLE
NPTWCMGWVIIMATLQPAALPHVLEARELVTFPTVLSPCPKGSPGSQGILDFAGSSSVIH
SEESVAELTPTSADFAPTDSAD

>gi568815592f:1212705_1413913|GENSCAN_predicted_CDS_5|609_bp
atggggctgcgtggccaaagggccctggtcaccctgcgcctcccctgcctgcgagcctgt
gcagtcagccagacacaaggcgaggaagccagcatggtcggcccgctcttgcccccgtcc
tccatgaagccttctcctcctactggcccttttggcaacctctgtgcccagctggaggat
ggagggatgcagaagccaggggccgtgcaaagcaggagcagccactctgcaggcagcagc
tctctccccctctctgggggacaaacatcacgggctgctggtccccaatatgaataccct
ctgaagtctcaggctggtgtctacctgaaacctccacccaacctgtttgtacacttggaa
aacccaacctggtgcatgggctgggtgataatcatggcaacactgcagcctgcagccctc
cctcatgttctggaggccagggaacttgtaacattcccaacagttctgagtccatgccca
aaaggttctccaggatctcagggaatactggattttgcaggatcctcctccgtgattcat
tcagaagagtccgtggctgagctgacaccaacgtcagctgattttgccccaacagactct
gccgactga

>gi568815592f:1212705_1413913|GENSCAN_predicted_peptide_6|102_aa
MKLGKSKREKKLAKEKEGFPISGTKSKAQAVLPIKAQASPLFLSAVDYDVRIHYAHRGYL
LPHKLVDKEIVGEKMVSKASMQSFIGQFPPRTTKSISKDFSG

>gi568815592f:1212705_1413913|GENSCAN_predicted_CDS_6|309_bp
atgaaacttggaaaaagtaaaagggaaaagaaactcgcaaaggaaaaagaaggctttcct
atctcaggaactaagtcaaaagcccaggctgtgctgccaataaaagcgcaggccagcccg
ctgtttttaagtgccgtggactatgatgtcagaattcattacgcacacaggggctattta
ctgcctcataaacttgtagacaaggaaattgttggagaaaaaatggtttccaaagcttca
atgcaatcattcattgggcagttccccccaaggaccaccaagtccatctccaaggacttt
tctggctga

>gi568815592f:1212705_1413913|GENSCAN_predicted_peptide_7|43_aa
MPRIAGGAECFLQLGAVATPVWENAFREGWHRGRRLEAAGSHP

>gi568815592f:1212705_1413913|GENSCAN_predicted_CDS_7|132_bp
atgccccgaattgctgggggtgcggagtgctttctgcagctgggcgcagtggcgaccccg
gtgtgggagaacgccttccgcgaggggtggcaccgagggcggcgtctagaagctgcaggc
agtcacccctga

>gi568815592f:1212705_1413913|GENSCAN_predicted_peptide_8|42_aa
MLQKPARLRVTHRPASAAGVAGPRVAGRREPRAARLVCEDCV

>gi568815592f:1212705_1413913|GENSCAN_predicted_CDS_8|129_bp
atgctgcagaagcctgcccgcctgcgggtcacacaccggccggcctcggctgcaggggtt
gcggggccacgggtcgcggggcgccgggagccgcgagcagcccgtctggtgtgcgaggat
tgtgtttga

>gi568815592f:1212705_1413913|GENSCAN_predicted_peptide_9|547_aa
MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASCASSS
SSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPSKR
LTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAS
EFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLPQGFDFQAPPSAPLGCHSQ
GGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPGGVGAA
GGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSSPGASPYLKQPPALTPSSN
PAASAGLHSSMSSYSLEQSYLHQNAREDLSGAALEFSIKPCEHFRKELGLLSSRSAHQSA
DGRLRGQVPSANPRAERPMDFCFTWLGLNSGEGTFGNAETVLTVALQKRVVATGILDLKA
RDVAKHPPTQMLLQVNKPTGTQEESQQVTAHPAPDEKGDVRNAAASHLALRGILTSGNAR
SRKSNTE

>gi568815592f:1212705_1413913|GENSCAN_predicted_CDS_9|1644_bp
atgaccaccgagggcgggccgccgccggccccgctccgccgcgcgtgcagcccggtcccc
ggcgcgctccaggccgccctgatgagcccgccgcccgccgccgccgccgccgccgccgcc
gccccggagaccacctcctcctcctcgtcgtcgtcctccgcctcctgcgcctcgtcctcg
tcctcctccaattcggccagcgccccctcggctgcctgcaagagcgcgggcggcggcggc
gcgggcgccgggagcgggggcgccaagaaggcgagctcggggctgcggcggcccgagaag
ccgccctactcgtacatcgcgctcatcgtcatggccatccagagctcgcccagcaagcgc
ctgacgctcagcgagatctaccagttcctgcaggcgcgcttccccttcttccgcggcgcc
taccagggctggaagaactcggtgcgccacaatctctcgctcaacgagtgcttcatcaag
ctgcctaagggcctcgggcggcccggcaagggccactactggaccatcgacccggccagc
gagttcatgttcgaggagggctcgttccgccgccggccgcgcggcttcaggcggaagtgc
caggcgctcaagcccatgtaccaccgcgtggtgagcggcttgggcttcggggcgtcgctg
ctgccccagggcttcgacttccaggcgcccccgtcggcgccgctcggctgccacagccag
ggcggctacggcggcctcgacatgatgcccgcgggctacgacgccggcgcgggcgccccc
agccacgcgcaccctcaccaccaccaccaccaccacgtcccgcacatgtcgcccaacccg
ggttccacctacatggccagctgcccggtgcccgcgggacccgggggcgtcggtgcggcc
gggggcggcggcggcggcgactacgggccggacagcagcagcagcccggtaccctcgtcc
ccggccatggcgagcgccatcgaatgccactcgccctacacgagccctgcggcgcactgg
agctcgcctggcgcctcgccttacctcaagcagccgcctgccctgacgcccagcagcaac
cccgccgcctcggcaggcctgcactccagcatgtcctcctactcgctggagcagagctac
ttgcaccagaacgctcgcgaggacctctcaggggctgccctggagttctccattaagccc
tgcgagcacttcaggaaggagctcgggcttctgtcatcccgctcagcacatcaaagcgcc
gacggccgccttcgtgggcaggtccccagtgccaacccacgagctgaaagacccatggac
ttctgttttacttggcttggcctgaattctggggaagggacatttggcaatgctgagaca
gttttgactgtggcactgcagaagagggtggttgctactggcatcttggatctaaaggcc
agggatgttgctaaacatcccccgacgcagatgctgctccaggtgaacaaacccacaggg
actcaggaggaatcccagcaagtgacggctcatcctgccccagatgaaaaaggagatgtt
cgtaacgcagctgcttcccacctcgcacttcggggcattcttacatctggcaacgctaga
agccgcaagtcaaacacagaataa