GENSCAN 1.0	Date run:  3-Nov-116	Time: 12:24:57

Sequence gi568815593r:156819460_157063198 : 243739 bp : 41.28% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1661   1656    6                               1.05
 1.02 Term -  10649  10480  170  0  2   73   33   135 0.494   3.56
 1.01 Init -  12664  12601   64  1  1   54   98    34 0.392   2.37
 1.00 Prom -  16965  16926   40                              -4.85

 2.00 Prom +  30438  30477   40                              -3.85
 2.01 Sngl +  31104  31721  618  2  0   91   43   917 0.816  83.44
 2.02 PlyA +  32344  32349    6                               1.05

 3.00 Prom +  33341  33380   40                              -5.75
 3.01 Init +  41533  41621   89  0  2   83   41   108 0.505   5.76
 3.02 Intr +  59064  59261  198  0  0  -40   42   247 0.271   4.84
 3.03 Term +  59385  59547  163  0  1   30   47   185 0.378   5.03
 3.04 PlyA +  60100  60105    6                               1.05

 4.00 Prom +  64733  64772   40                              -5.15
 4.01 Init +  70269  70410  142  2  1   52   98   137 0.822  11.44
 4.02 Term +  91042  91193  152  2  2   93   49    62 0.040  -0.11
 4.03 PlyA +  91683  91688    6                              -0.45

 5.09 PlyA -  92587  92582    6                               1.05
 5.08 Term -  94957  94740  218  2  2   69   54   117 0.278   2.72
 5.07 Intr - 102757 102640  118  1  1   78   94    77 0.716   6.42
 5.06 Intr - 106853 106804   50  0  2  115   98    49 0.983   6.08
 5.05 Intr - 108328 108281   48  2  0   97   81    55 0.254   3.43
 5.04 Intr - 130272 130192   81  1  0  124   75    81 0.871   9.09
 5.03 Intr - 132331 132053  279  2  0   50  101   299 0.999  23.93
 5.02 Intr - 135297 134956  342  1  0  110   99   141 0.649  11.88
 5.01 Init - 143739 143682   58  0  1   72   80    24 0.482   1.53
 5.00 Prom - 143806 143767   40                              -7.45

 6.00 Prom + 161330 161369   40                              -6.75
 6.01 Init + 166023 166168  146  2  2   81   58   116 0.757   7.54
 6.02 Intr + 175050 175089   40  0  1   93   84    22 0.009  -0.39
 6.03 Term + 188154 188432  279  2  0   71   41   250 0.813  13.06
 6.04 PlyA + 189980 189985    6                               1.05

 7.00 Prom + 193894 193933   40                              -3.65
 7.01 Init + 195715 195794   80  0  2   83   47    55 0.148   1.48
 7.02 Intr + 204257 204365  109  2  1  109   91    25 0.628   4.27
 7.03 Term + 205961 206116  156  1  0   65   48    77 0.553  -1.65
 7.04 PlyA + 206521 206526    6                               1.05

 8.11 PlyA - 209156 209151    6                               1.05
 8.10 Term - 210382 210274  109  0  1   76   47   119 0.913   3.60
 8.09 Intr - 213428 213395   34  0  1   82  121    16 0.935   0.66
 8.08 Intr - 217902 217788  115  0  1   88  106    84 0.976   9.30
 8.07 Intr - 218079 217980  100  2  1   36  106    39 0.149  -0.31
 8.06 Intr - 228629 228445  185  2  2   55  110    39 0.065   0.46
 8.05 Intr - 229125 228995  131  1  2   89   98    -9 0.059  -0.31
 8.04 Intr - 233195 232902  294  0  0   70   98   407 0.073  35.96
 8.03 Intr - 236074 235742  333  2  0  130  113   122 0.990  13.52
 8.02 Intr - 238496 238439   58  2  1  101  111     2 0.624   1.34
 8.01 Init - 240950 240840  111  2  0   58   61    93 0.483   3.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 233190 232907  284  1  2   10   46   566 0.906  39.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:156819460_157063198|GENSCAN_predicted_peptide_1|77_aa
MPVFALCPGDPRPGVACGFWEEWSSIVMMEKGVPVIIFTLQGPGGWVWCEVRRNILSFKE
HFPEIAQNQLTIRWVVA

>gi568815593r:156819460_157063198|GENSCAN_predicted_CDS_1|234_bp
atgccagtttttgccctgtgtcctggagacccacgacctggcgtggcatgtgggttttgg
gaagaatggagctccattgtcatgatggaaaagggtgttccagtcatcatattcacgttg
caaggaccaggtggatgggtctggtgcgaggtgaggagaaacatcctctcctttaaagaa
cactttccagaaattgcacaaaatcaacttacaatccgttgggttgtggcatag

>gi568815593r:156819460_157063198|GENSCAN_predicted_peptide_2|205_aa
MAASTASHRPIKGILKNKTSTTSSMVASAEQPRRSVDEELSKKSQKWDEINILATYHPAD
KGYGLMKIDEPSPPYHSMMGDDEDACRDTETTEAMAPDILAKKLAAAEGLEPKYRIQEQE
SSGEEDSDLSPEEREKKRQFEMRRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG
ESMNTEESNQGSTPSDQQQNKLRSS

>gi568815593r:156819460_157063198|GENSCAN_predicted_CDS_2|618_bp
atggcggcctcgacggcctcccaccggcccatcaaggggatcttgaagaacaagacctct
acgacttcctctatggtggcgtcggccgaacagccccgcaggagtgtcgacgaggagctg
agcaaaaaatcccagaagtgggatgaaattaacatcttggcgacctatcatccagcagac
aaaggctatggtttaatgaaaatagatgaaccaagccctccttaccatagtatgatgggt
gatgatgaagatgcgtgtagggacaccgagaccactgaagccatggcgccagacatccta
gccaagaaattagctgctgctgaaggcttggagccaaagtaccggattcaggaacaagaa
agcagtggagaggaggatagtgacctctcacctgaagaacgagaaaaaaagcgacaattt
gaaatgagaaggaagcttcactacaatgaaggactcaatatcaaactagccagacaatta
atttcaaaagacctacatgatgatgatgaagatgaagaaatgttagagactgcagatgga
gaaagcatgaatacggaagaatcaaatcaaggatctactccaagtgaccaacagcaaaac
aaattacgaagttcatag

>gi568815593r:156819460_157063198|GENSCAN_predicted_peptide_3|149_aa
MATQNVMCSQQQQQQQQNPRDCSKCKILAGNETAQCCGELQGQWCGHDGQSPPRPPVIEA
RLSKTDSKPGERSKKLDGAVNLPQDMQQRVSDLHEDLIVFRDVKFSPSTRAASQRRASCG
SPPLVNLKRLKGDAPGDKKLSLQELTNSG

>gi568815593r:156819460_157063198|GENSCAN_predicted_CDS_3|450_bp
atggctactcagaatgtaatgtgtagccagcagcagcagcagcagcagcaaaatccaaga
gattgttcaaaatgcaaaatcttagccggaaatgaaacagcccagtgttgtggagaattg
cagggccagtggtgtggtcatgatggacagtctcctccaaggccacctgtgattgaagcc
cgattgtcaaaaacagacagtaaaccaggagagagaagcaagaagttagatggtgctgtc
aacttgccacaggatatgcagcaaagggtatcggacttgcatgaagatctcattgtcttc
cgggatgtgaagttctctcctagtaccagggctgcaagccagagaagagccagctgtggg
tccccacctctagtgaacctcaagagactcaaaggggatgctccaggagacaagaagctc
tctcttcaggagctgaccaacagtgggtag

>gi568815593r:156819460_157063198|GENSCAN_predicted_peptide_4|97_aa
MWEVGYEKAWKETLDNWTLSLKHAGFQVPVSVRVEMASRLLEILREPGTSEIIQIIGIMK
WVIKIEMALQTVSCLGSGTGTLLFLTMPQLPTGPFGT

>gi568815593r:156819460_157063198|GENSCAN_predicted_CDS_4|294_bp
atgtgggaggtcggatatgagaaagcctggaaggagacgctagacaactggacgctgtct
ttgaaacatgctggcttccaagtgccagtgagtgtgagggtggaaatggctagcaggctg
ttggaaatactcagagaaccaggcacatcagaaattatccaaataattggaatcatgaaa
tgggtgataaagatagaaatggctttgcagactgtaagctgcttaggatcagggactggg
actctcttgttcctcacaatgccccagctccccacagggccctttggcacatag

>gi568815593r:156819460_157063198|GENSCAN_predicted_peptide_5|397_aa
MSKEPLILWLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCP
YSGCKEALIRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWF
NDVKINVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTG
TPLQMTTIAVFTTANTCLSLTPSTLPEEATGLLTPEPSKEGPILTAESETVLPSDSWSSV
ESTSADTVLLTSKVLVDSSGHGQVSQVGTASDTAVPEQNKTTKTGQMDGIPMSMKNEMPI
SQLLMIIAPSLGFVLFALFVAFLLREEAVKGEPGRKLNEARWDTFKWECVELTHEELKPA
VSRLNERLTGIQQWVAGETLCLSKENRKLRSGLPGWR

>gi568815593r:156819460_157063198|GENSCAN_predicted_CDS_5|1194_bp
atgtccaaagaacctctcattctctggctgatgattgagttttggtggctttacctgaca
ccagtcacttcagagactgttgtgacggaggttttgggtcaccgggtgactttgccctgt
ctgtactcatcctggtctcacaacagcaacagcatgtgctgggggaaagaccagtgcccc
tactccggttgcaaggaggcgctcatccgcactgatggaatgagggtgacctcaagaaag
tcagcaaaatatagacttcaggggactatcccgagaggtgatgtctccttgaccatctta
aaccccagtgaaagtgacagcggtgtgtactgctgccgcatagaagtgcctggctggttc
aacgatgtaaagataaacgtgcgcctgaatctacagagagcctcaacaaccacgcacaga
acagcaaccaccaccacacgcagaacaacaacaacaagccccaccaccacccgacaaatg
acaacaaccccagctgcacttccaacaacagtcgtgaccacacccgatctcacaaccgga
acaccactccagatgacaaccattgccgtcttcacaacagcaaacacgtgcctttcacta
accccaagcacccttccggaggaagccacaggtcttctgactcccgagccttctaaggaa
gggcccatcctcactgcagaatcagaaactgtcctccccagtgattcctggagtagtgtt
gagtctacttctgctgacactgtcctgctgacatccaaagtcttagtggacagctcaggc
catggccaggtgtctcaagtaggaactgcatctgatacagcagttcctgagcagaacaaa
acaacaaaaacaggacagatggatggaatacccatgtcaatgaagaatgaaatgcccatc
tcccaactactgatgatcatcgccccctccttgggatttgtgctcttcgcattgtttgtg
gcgtttctcctgagagaggaagctgtaaagggagaacctggcaggaaacttaatgaagcc
aggtgggacacatttaaatgggaatgtgttgaactaactcatgaagagctaaagccagct
gtcagcaggcttaatgaaaggttaacaggaatccagcaatgggtggctggggagactctt
tgtctctctaaagaaaacaggaagttgagaagtgggctccctgggtggaggtga

>gi568815593r:156819460_157063198|GENSCAN_predicted_peptide_6|154_aa
MKKNQSKKAENSQNQNGSSPKDHNSSPAREQNWTVNEFDELTEEVSEDRLYKTNPTPHIM
PSGCRLLVVPPCWNLDSGSLIPTTPLGSAQLGTLYEGSNPTFHLGIVTVEALAGKGSTPQ
QASAWAPRLSHSTSETQVEAAKPSSLLHSVHLQA

>gi568815593r:156819460_157063198|GENSCAN_predicted_CDS_6|465_bp
atgaagaaaaaccagagcaaaaaggctgaaaattcccaaaaccagaatggctcttctcca
aaggatcacaactcctctccagcaagggaacaaaactggacggtgaatgaatttgatgaa
ttgacagaggaggtttcagaagatagattgtataaaacaaatcctacacctcatatcatg
ccatctggttgccggctgctggtggtgccaccatgctggaatctggacagtggcagtctt
attccaacaactccactaggcagtgcccaactggggactctgtatgagggctccaacccc
acatttcaccttggtattgtgacagtagaggctcttgcagggaagggctccaccccgcag
caggcttctgcctgggcacccaggctttcccattcaacctctgaaacccaggtagaagct
gccaagccttcttcactcttgcattctgtacacctacaggcctaa

>gi568815593r:156819460_157063198|GENSCAN_predicted_peptide_7|114_aa
MDEAGNHHSQQTITRTENQTLDVLTHREHYEPVTNIHKLDHENQSVNKLPLHFLGLPIFW
RLQKQPLTNQLKLHHFLPPNKHPLPQWFSTVPAGTLSVVTTGGCDWHLVGGGQG

>gi568815593r:156819460_157063198|GENSCAN_predicted_CDS_7|345_bp
atggatgaagctggaaaccatcattctcagcaaactatcacaagaacagaaaaccaaaca
ctggatgttctcactcatagagagcactacgaacctgtaacaaacatccacaaactagac
catgaaaaccagagtgtaaataagcttcccctacattttttgggtcttcctatattttgg
agactccagaagcagccgctgaccaaccagctaaagctacaccacttcctaccccccaac
aaacaccctctacctcagtggttctcaactgtgcccgcagggacattgtcagttgtcacc
actggaggatgtgactggcatctagtgggtggaggccagggatga

>gi568815593r:156819460_157063198|GENSCAN_predicted_peptide_8|489_aa
MENTATEKALGLRQVGKKALVAGAESAGERVVEEIYGADPIMHPQVVILSLILHLADSVA
GSVKVGGEAGPSVTLPCHYSGAVTSMCWNRGSCSLFTCQNGIVWTNGTHVTYRKDTRYKL
LGDLSRRDVSLTIENTAVSDSGVYCCRVEHRGWFNDMKITVSLEIVPPKVTTTPIVTTVP
TVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVSTTTSVPTTTSIPTT
TSVPVTTTVSTFVPPMPLPRQNHEPVLGLQASATVPSCFVICKKDVIPRSCRMLVRIKWD
ERFGTWLQGGNSQTGFSVSSHTTSTTIINSDEDFCDRMCGVFSPYIKQWTPAVSLIQFLH
CLPGERVISHSCPRFSPYGYKLRSFGLTLMFQKSPSTNTGKCGWQLFLEHSLLTANTTKG
IYAGVCISVLVLLALLGVIIAKKYFFKKEVQQLSVSFSSLQIKALQNAVEKEVQAEDNIY
IENSLYATD

>gi568815593r:156819460_157063198|GENSCAN_predicted_CDS_8|1470_bp
atggagaacacagccacggaaaaggccttagggttgaggcaagttggaaagaaagctcta
gtagctggggctgagtcagcaggggagagagtggtagaagaaatctatggggctgatccc
ataatgcatcctcaagtggtcatcttaagcctcatcctacatctggcagattctgtagct
ggttctgtaaaggttggtggagaggcaggtccatctgtcacactaccctgccactacagt
ggagctgtcacatccatgtgctggaatagaggctcatgttctctattcacatgccaaaat
ggcattgtctggaccaatggaacccacgtcacctatcggaaggacacacgctataagcta
ttgggggacctttcaagaagggatgtctctttgaccatagaaaatacagctgtgtctgac
agtggcgtatattgttgccgtgttgagcaccgtgggtggttcaatgacatgaaaatcacc
gtatcattggagattgtgccacccaaggtcacgactactccaattgtcacaactgttcca
accgtcacgactgttcgaacgagcaccactgttccaacgacaacgactgttccaatgacg
actgttccaacgacaactgttccaacaacaatgagcattccaacgacaacgactgttctg
acgacaatgactgtttcaacgacaacgagcgttccaacgacaacgagcattccaacaaca
acaagtgttccagtgacaacaactgtctctacctttgttcctccaatgcctttgcccagg
cagaaccatgaaccagtgctgggattacaggcatcagccaccgtgcccagctgttttgtc
atttgtaaaaaggatgtaataccaagatcttgcagaatgcttgtgaggatcaaatgggat
gaaagatttgggacatggttacaggggggaaactcccaaactgggttttctgtctcttct
cacaccacgtcaacaacaatcatcaactcagatgaagacttctgtgaccgaatgtgtgga
gttttttccccatacatcaagcagtggacaccggctgtgtctttaattcagttcttacac
tgtctacccggagagagggtcatatcccacagttgtcctagattttcaccgtatggttat
aaactgagatcatttggtcttacccttatgttccagaagtccccaagcaccaatacaggt
aaatgtggctggcaactgttcctagaacatagtctactgacggccaataccactaaagga
atctatgctggagtctgtatttctgtcttggtgcttcttgctcttttgggtgtcatcatt
gccaaaaagtatttcttcaaaaaggaggttcaacaactaagtgtttcatttagcagcctt
caaattaaagctttgcaaaatgcagttgaaaaggaagtccaagcagaagacaatatctac
attgagaatagtctttatgccacggactaa