GENSCAN 1.0	Date run:  8-Nov-116	Time: 13:41:51

Sequence gi568815593r:151216820_151447460 : 230641 bp : 43.30% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    448    594  147  0  0  122   64    27 0.663   4.13
 1.02 Intr +   6657   6930  274  2  1   74   55   130 0.706   5.41
 1.03 Term +   7147   7295  149  2  2   70   52    80 0.405   0.66
 1.04 PlyA +   8006   8011    6                               1.05

 2.03 PlyA -   8030   8025    6                               1.05
 2.02 Term -  29665  29514  152  2  2   37   36   169 0.366   4.67
 2.01 Init -  31616  31370  247  2  1   42   16   179 0.459   3.86
 2.00 Prom -  32463  32424   40                              -8.26

 3.00 Prom +  35107  35146   40                              -6.56
 3.01 Init +  36398  36478   81  1  0   47  113   204 0.832  17.77
 3.02 Intr +  42178  42258   81  0  0   -8   89   121 0.095   2.43
 3.03 Intr +  42936  43097  162  2  0   77  105   103 0.911  11.07
 3.04 Intr +  49912  50094  183  0  0  110  100   110 0.999  14.38
 3.05 Term +  50477  50632  156  1  0   95   38   164 0.997  10.03
 3.06 PlyA +  52400  52405    6                               1.05

 4.26 PlyA -  56057  56052    6                               1.05
 4.25 Term -  60842  60574  269  0  2  111   32   283 0.903  20.66
 4.24 Intr -  64364  64195  170  1  2   91   76   201 0.998  18.79
 4.23 Intr -  67391  67225  167  2  2  122   84   127 0.980  14.46
 4.22 Intr -  67892  67794   99  2  0   83   95    73 0.993   7.81
 4.21 Intr -  70645  70427  219  1  0   47   58   297 0.976  21.10
 4.20 Intr -  71651  71567   85  1  1  155  103     2 0.997   8.22
 4.19 Intr -  76640  76545   96  1  0  111   62    81 0.946   6.92
 4.18 Intr -  79449  79361   89  0  2  144   55   100 0.998  11.07
 4.17 Intr -  81864  81774   91  2  1  123   91    33 0.907   7.10
 4.16 Intr -  86535  86408  128  0  2   44   97    61 0.366   2.08
 4.15 Intr -  87328  87290   39  1  0   95   86    11 0.188   0.02
 4.14 Intr -  92842  92658  185  2  2   49   43   193 0.285  10.41
 4.13 Intr -  93347  93285   63  0  0   50   61    87 0.039   0.89
 4.12 Intr -  93551  93529   23  1  2   38  117    19 0.032  -3.01
 4.11 Intr - 100269 100002  268  1  1  118   97   468 0.949  47.29
 4.10 Intr - 105396 105227  170  2  2   68   84   274 0.960  24.59
 4.09 Intr - 108633 108467  167  0  2   71   30   172 0.352   8.46
 4.08 Intr - 116503 116405   99  1  0  114   79    18 0.847   3.81
 4.07 Intr - 118728 118510  219  0  0  126  109   344 0.704  38.80
 4.06 Intr - 122325 122241   85  2  1  123   80    17 0.001   4.22
 4.05 Intr - 126164 126069   96  1  0   76   86    56 0.469   3.32
 4.04 Intr - 126779 126691   89  2  2  129   78    87 0.638  10.57
 4.03 Intr - 127448 127358   91  1  1  110   99    99 0.990  13.20
 4.02 Intr - 130437 130408   30  2  0   97   90    17 0.507   0.05
 4.01 Init - 130641 130478  164  0  2   75   92   165 0.685  14.81
 4.00 Prom - 135292 135253   40                              -4.66

 5.04 PlyA - 137132 137127    6                               1.05
 5.03 Term - 144168 143960  209  1  2   16   32   192 0.033   3.90
 5.02 Intr - 148686 148650   37  0  1   89   36    20 0.011  -5.26
 5.01 Init - 149807 149652  156  2  0   67   36   280 0.602  18.67
 5.00 Prom - 150578 150539   40                              -4.06

 6.00 Prom + 154360 154399   40                              -3.46
 6.01 Init + 163894 164121  228  0  0   33  -15   192 0.482   1.77
 6.02 Intr + 164210 164359  150  1  0   42   40   167 0.041   7.66
 6.03 Term + 165132 165566  435  2  0   66   45   295 0.060  18.29
 6.04 PlyA + 166418 166423    6                               1.05

 7.04 PlyA - 168124 168119    6                               1.05
 7.03 Term - 170466 170293  174  0  0   79   46    81 0.617   0.76
 7.02 Intr - 171048 170996   53  1  2   74  116    30 0.830   3.03
 7.01 Init - 172950 172818  133  0  1   84   44    65 0.806   2.00
 7.00 Prom - 173074 173035   40                              -2.46

 8.00 Prom + 174156 174195   40                              -4.66
 8.01 Init + 195695 195866  172  1  1   58   33   192 0.102  10.30
 8.02 Intr + 200654 200795  142  0  1  111   78    12 0.178   1.91
 8.03 Term + 203616 203715  100  0  1   68   39    59 0.085  -3.40
 8.04 PlyA + 203991 203996    6                               1.05

 9.03 PlyA - 206538 206533    6                               1.05
 9.02 Term - 208578 208506   73  2  1  159   49    39 0.917   4.48
 9.01 Init - 214662 214463  200  0  2  100   99   106 0.911  11.28

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  42172  42258   87  0  0   53   89   107 0.885   7.94
S.002 Init -  93345  93285   61  0  1   57   61    80 0.923   3.61
S.003 Term + 123199 123549  351  0  0  -37   41   509 0.950  28.19
S.004 Sngl - 144121 143960  162  1  0   74   32   178 0.837   5.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:151216820_151447460|GENSCAN_predicted_peptide_1|189_aa
MQLLVSKSNGPCPGTSLFTVLPLLLPRWVPKGGTGFLLSFLIAGNLGLGVPRDADTASLW
NTLRAALRLSAFNPRGEEAEGPERSSHLSMATQRTAPDRKQRAPATDTRHLPTRGSGNQL
PFPGPGAVFVNSAAWCGSGRAHPPPGAPGRRFPTPGPPEEPAIRAPLPAPRPPAGAAGET
LKLNLEALS

>gi568815593r:151216820_151447460|GENSCAN_predicted_CDS_1|570_bp
atgcagctgctggtgtccaaaagcaatgggccctgtccaggcacctccttgtttacagtg
ctgcctcttctgctgccaagatgggttccaaagggaggcactgggttcttgctgtcattt
ttgattgctggcaacttggggctgggggtccccagggatgctgatactgcgagtctgtgg
aacactcttcgagcagccctgagattatcagcctttaacccccggggggaggaagccgaa
ggcccagagaggtcaagtcacttgtccatggccacacagcgaacagccccagaccgaaag
cagagggcacctgccacagacacacgacatctccccacccgaggcagcgggaatcagctg
cctttccctggcccgggtgccgtgtttgtaaactcggctgcttggtgcggctcgggccgg
gcccatcctcctccgggggctcccggacgccgcttcccaactccggggcccccagaggag
cctgcgatccgggccccgctgcccgctccgcgcccgccggctggggctgccggcgagacc
ctgaaactgaacctggaagcgctgtcttga

>gi568815593r:151216820_151447460|GENSCAN_predicted_peptide_2|132_aa
MAAIIGDALNAQRASKGNPKDYKDNTSKGKSCFKCKKSGHWAKECTKPPPSSSPQAPAVN
AKAPVTNPGTGELIASAPTEGLVQGLDWVHLSRIKPAIPEDPDQEPEVSISHYTCEPVEA
LKFLFKRQPKDE

>gi568815593r:151216820_151447460|GENSCAN_predicted_CDS_2|399_bp
atggcagccatcattggtgatgccctgaatgcccaaagagcatctaagggaaacccgaag
gactataaagataataccagcaaaggcaagtcttgcttcaaatgcaagaaaagcgggcat
tgggcaaaggaatgtactaagcccccgccctccagctcccctcaggcccctgctgtcaac
gcaaaggcaccagtcacgaaccctggcactggagaattgattgcctctgctcccactgag
gggctggtacaaggattagattgggtacatctttcaaggatcaagccagcaataccagaa
gatccggaccaggaacctgaagtttccatcagccactacacctgtgaacctgtggaagcc
ctgaagttcctgtttaaaagacagccaaaagatgagtaa

>gi568815593r:151216820_151447460|GENSCAN_predicted_peptide_3|220_aa
MQSLMQAPLLIALGLLLAAPAQAHLKKSHADVVVVESGDLGDVEEEQEQLSTGVPSQLSS
FSWDNCDEGKDPAVIRSLTLEPDPIIVPGNVTLSVMGSTSVPLSSPLKVDLVLEKEVAGL
WIKIPCTDYIGSCTFEHFCDVLDMLIPTGEPCPEPLRTYGLPCHCPFKEGTYSLPKSEFV
VPDLELPSWLTTGNYRIESVLSSSGKRLGCIKIAASLKGI

>gi568815593r:151216820_151447460|GENSCAN_predicted_CDS_3|663_bp
atgcagtccctgatgcaggctcccctcctgatcgccctgggcttgcttctcgcggcccct
gcgcaagcccacctgaaaaagtcacatgcagatgtagtggtggtggaatcaggagacctg
ggggatgtggaggaggaacaggagcagctcagcacaggggtgccatcccagctcagtagc
ttttcctgggataactgtgatgaagggaaggaccctgcggtgatcagaagcctgactctg
gagcctgaccccatcatcgttcctggaaatgtgaccctcagtgtcatgggcagcaccagt
gtccccctgagttctcctctgaaggtggatttagttttggagaaggaggtggctggcctc
tggatcaagatcccatgcacagactacattggcagctgtacctttgaacacttctgtgat
gtgcttgacatgttaattcctactggggagccctgcccagagcccctgcgtacctatggg
cttccttgccactgtcccttcaaagaaggaacctactcactgcccaagagcgaattcgtt
gtgcctgacctggagctgcccagttggctcaccaccgggaactaccgcatagagagcgtc
ctgagcagcagtgggaagcgtctgggctgcatcaagatcgctgcctctctaaagggcata
taa

>gi568815593r:151216820_151447460|GENSCAN_predicted_peptide_4|1066_aa
MSVTKSTEGPQGAVAIKLDLMSPPESAKKLENKDSTFLDESPSESAGLKKTKGITLKLAL
AKTLRVFQALIHLVKGNMGTGILGLPLAVKNAGILMGPLSLLVMGFIACHCMHILVKCAQ
RFCKRLNKPFMDYGDTVMHGLEANPNAWLQNHAHWGRHIVSFFLIITQLGFCCVYIVFLA
DNLKQVVEAVNSTTNNCYSNETVILTPTMDSRLYMLSFLPFLVLLVLIRNLRILTIFSML
ANISMLVSLVIIIQYITQEIPDPSRLPLVASWKTYPLFFGTAIFSFESIGVVLPLENKMK
NARHFPAILSLGMSIVTSLYIGMAALGYLRFGDDIKASISLNLPNCWLYQSVKLLYIAGI
LCTYALQFYVPAEIIIPFAISRVSTRWALPLDLSIRLVMVCLTCLLAILIPRLDLVISLV
GSVSGTALALIIPPLLEVTTFYSEGMSPLTIFKDALISILGFVGFVVGTYQALDELLKSE
DSHPFSNSTTFVRSEAADLPGMKLQTFAESVTAHKGSVDPKNSGAQLASPSGSHTGDAGG
ATCQSCAVGPHSSALGWSMGLGAVEQGAALIGEALAAQEPMKRPLQIVNSMRTEIVMSLL
GRDYNSELNSLDNGPQSPSESSSSITSENVHPAGEAGLSMMQTLIHLLKCNIGTGLLGLP
LAIKNAGLLVGPVSLLAIGVLTVHCMVILLNCAQHLSQRLQKTFVNYGEATMYGLETCPN
TWLRAHAVWGRYTVSFLLVITQLGFCSVYFMFMADNLQQMVEKAHVTSNICQPREILTLT
PILDIRFYMLIILPFLILLVFIQNLKVLSVFSTLANITTLGSMALIFEYIMEGIPYPSNL
PLMANWKTFLLFFGTAIFTFEGVGMVLPLKNQMKHPQQFSFVLYLGMSIVIILYILLGTL
GYMKFGSDTQASITLNLPNCWLYQSVKLMYSIGIFFTYALQFHVPAEIIIPFAISQVSES
WALFVDLSVRSALVCLTCVSAILIPRLDLVISLVGSVSSSALALIIPALLEIVIFYSEDM
SCVTIAKDIMISIVGLLGCIFGTYQALYELPQPISHSMANSTGVHA

>gi568815593r:151216820_151447460|GENSCAN_predicted_CDS_4|3201_bp
atgtctgtgacaaaaagtactgagggtccccagggagccgttgccatcaaattggacctt
atgtcgcctcctgaaagtgccaagaagttggagaacaaggactctacattcttggatgaa
agtccttcagagtcagcaggcttgaagaagaccaagggcataaccctgaagcttgcattg
gcaaaaaccctgagagtgttccaggccttgattcacctggtgaaaggcaacatgggcaca
gggatcctgggactacccctcgctgtgaagaacgcgggcatcctgatgggcccactcagt
ctgctggtgatgggcttcattgcctgccactgtatgcacatcctggtcaagtgtgcccag
cgcttctgtaagaggcttaacaagccctttatggactatggggacacggtgatgcatgga
ctagaagccaaccccaacgcctggctccagaatcacgctcactggggaaggcatatcgtg
agcttcttccttattatcacccaacttggcttctgctgtgtgtacattgtgtttttggct
gataatttaaaacaggtagtggaagctgttaatagcacaaccaacaactgctattccaat
gagacggtgattctgacccccaccatggactcgcgactctacatgctctccttcctgccc
ttcctggtgctgctggtcctcatccggaacctcaggatcttgaccatcttctccatgctg
gccaacatcagcatgctggtcagcttggtcatcatcatacagtacattacccaggaaatc
ccagaccccagccggttgccactggtagcaagctggaagacctaccctctcttcttcgga
acagccattttttcttttgaaagcattggtgtggttctgcctctggaaaacaagatgaag
aatgcccgccacttcccagccatcctgtctttgggaatgtccatcgtcacttccctatac
attggcatggcggctctgggctacctgcggtttggagatgacatcaaggccagcataagc
cttaacctgcctaactgctggctgtaccagtctgtcaagcttctctacattgccggcatc
ctgtgcacctatgccctgcagttctacgtccctgcagaaatcatcatcccctttgccatc
tcccgggtgtcaacacgctgggcactgcctctggatctgtccattcgcctcgtcatggtc
tgcctgacatgcctcctggccatcctcatcccccgcctggacctggtcatctccctggtg
ggctccgtgagtggcaccgccctggccctcatcatcccaccgctcctggaggtcaccacg
ttctactcagagggcatgagccccctcaccatcttcaaggacgccctgatcagcatcctg
ggcttcgtgggctttgtggtggggacctaccaggccctggacgagctgctcaagtcagaa
gactctcaccccttttccaactccaccacttttgttcggagtgaagctgcagaccttccc
ggaatgaagctgcagaccttcgcagagagtgttacagctcataaaggcagtgtggaccca
aaaaactcaggagcccagctggcttcacccagtggatcccacaccggggatgcaggtgga
gctacctgccagtcctgcgccgtgggcccgcactcctcagcccttgggtggtcgatggga
ctgggcgccgtggagcagggggcagcgctcatcggggaggctctggccgcacaggagccc
atgaagcggcccctccagattgtaaattccatgagaacagagattgtaatgtcattgctt
ggaagggactacaacagtgagctgaactccttggacaacggacctcagtcaccctcagag
agcagcagtagcattacttcagagaatgtccatcctgctggagaagctggactatcgatg
atgcaaactttgatccacttgttgaaatgcaacattggcacagggctcctggggcttccc
ctggccataaagaatgccggcttgttggtcggtcctgtcagccttctggccatcggggtc
ctcaccgtgcactgcatggtcatcctgttgaactgtgctcaacacctcagccagagactg
cagaagacttttgtgaactatggagaggccacgatgtacggccttgaaacctgcccgaac
acctggctgagggcccatgcagtgtggggaaggtacactgtcagcttcttattagtcatc
acccagctgggcttctgcagtgtttattttatgtttatggcagacaatttacaacagatg
gtggaaaaagcccacgtgacctccaacatctgccagcccagggagattctgacgctgacc
cccatcctggacattcgtttctacatgctgataatcctgcccttcctgatcctgttggtg
tttatccagaacctcaaggtgctgtccgtcttctcgacattggccaacatcaccaccctt
gggagcatggctctgatctttgagtatatcatggaggggattccatatcccagcaaccta
cccttgatggcaaactggaagaccttcttgctgttctttggtacagccatcttcacattt
gaaggcgtcggtatggttctgcctctcaaaaaccagatgaagcatccacagcagttttct
tttgttctgtacttggggatgtccattgtcatcatcctctatatcttactggggacactg
ggctacatgaagtttgggtcagacacccaggccagcatcaccctcaacttgcccaattgc
tggttgtaccagtcagtcaagctgatgtactctatcggcatcttcttcacctatgccctc
cagttccacgtcccagctgagatcatcatcccgtttgccatctcccaagtgtcagagagc
tgggcactgtttgtagacctgtctgtccgctcagccttggtctgtctaacctgtgtctca
gccatcctcatcccccgcctggacttggtcatctccctggtaggctccgtgagcagcagc
gccctggctctcatcatcccagccctcctggagatcgtcatcttttactctgaggacatg
agctgtgtcaccattgccaaggacatcatgattagcatcgtgggccttttagggtgtata
tttgggacataccaagccctctatgagttgccccaacccatcagccattccatggccaac
tccacaggtgtccatgcataa

>gi568815593r:151216820_151447460|GENSCAN_predicted_peptide_5|133_aa
MVLTQMSLVSSSTLPLIILCLLEMTTYYSECMSSLIITKDALISILGFVGFLKLVTKSLV
SLLIEPIKEIKKEIVDVTKKMGSEGFQDMDLGEIQEQIDTMPEELTKDDWMEMSASQPVS
AEEEEEAAAVSEN

>gi568815593r:151216820_151447460|GENSCAN_predicted_CDS_5|402_bp
atggtccttacccagatgagcttggtgagcagcagcaccctgcccctcatcatcctgtgc
ctcctggagatgactacctactactcagagtgcatgagctccctcatcatcaccaaggac
gccctgatcagcatcctgggctttgtgggatttttgaagcttgttaccaagagtttggtt
tccctgctgattgagccaatcaaggaaataaaaaaagagattgtggatgtgacaaaaaag
atggggagtgaagggtttcaagatatggatcttggagaaattcaagagcaaatagacacc
atgccagaggaattaacaaaagatgactggatggagatgagtgcttctcaaccggtgtca
gctgaggaggaagaagaagcagcagcagtgtcagaaaactaa

>gi568815593r:151216820_151447460|GENSCAN_predicted_peptide_6|270_aa
MSIDLIQDEVGSPLQTDGGHCERKASGKTGNGSTRTGSSRPTASRTQQNKGKGCEESPRD
GAAPDAASIGNAPDFARREVSVDREKQLALRHQPHDHVTTSAILQDLSLAGKDELAMAVW
KELMVAAVSKVNPLGGYSTTMLKMAVLMPSPGALPVFALPVTGGTDVTPKESLLTVIHMV
LTEHDPFKHSADSELKALVCMALNEQRLMSWVNLICKCGSLIETHYQPGSYIAHTGFESA
LNLHSRLSSLKFSLPVDLAMRQLKNIKDAF

>gi568815593r:151216820_151447460|GENSCAN_predicted_CDS_6|813_bp
atgtccatcgacctcatccaagatgaagtgggaagccccttgcagacagatggtggacat
tgtgagcgcaaggcctctgggaagacaggaaatggttccaccagaactggcagcagcaga
cccactgcctccaggacacagcaaaacaaaggcaagggatgtgaagaaagtccaagggac
ggggctgcacctgatgccgcaagcattggcaatgctccagattttgctaggcgggaggtg
tcagtggacagagagaagcagctagccttgaggcaccagccacacgaccatgtcaccacc
tctgccatcctccaggacctctctctggcaggcaaggatgagctggccatggctgtgtgg
aaggagctgatggtggctgcagtcagcaaggtgaaccccttggggggttacagtactacc
atgctaaaaatggcagtgcttatgcccagcccgggagctctcccagtctttgcccttcct
gttacaggaggcactgatgtaacccccaaagagagcctactgacagtcatccacatggtg
ctgacagagcacgaccctttcaagcacagtgcagactctgaattgaaggctttggtgtgc
atggcactgaatgagcagcgtctgatgtcctgggtgaacctcatctgcaagtgcgggtca
ctcatcgagactcactaccagcctgggagctacatagcacacacaggctttgagagtgcc
ctcaacctgcacagtcgcctcagcagcctcaagttcagcctccctgtagatctggccatg
cgccagctcaaaaatatcaaagatgccttttga

>gi568815593r:151216820_151447460|GENSCAN_predicted_peptide_7|119_aa
MAYYAAIKKDEFMSFVGTWMKLETIILSKLLQGQKTKHRMFSLNGHGFPGPLNRNLRKRR
KKSLLVSVRGSFLIPSALHRLYQSVELLYLGGICLTYPLQFYVSAKIIVPVTVSWVCKC

>gi568815593r:151216820_151447460|GENSCAN_predicted_CDS_7|360_bp
atggcatactatgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatg
aagctggaaaccattattctcagcaaactattgcaaggacaaaaaaccaaacaccgcatg
ttctcactcaatgggcatggcttcccaggtcccttaaataggaatttgcgcaagagaaga
aaaaagagcctgctggtgtctgtgcgtggatctttcctgatcccctctgccttgcacagg
ttgtaccagtctgttgagctcctctacttgggtggcatctgccttacctaccccctgcag
ttctatgtctctgccaagatcattgtgcctgtcactgtttcctgggtgtgcaagtgctga

>gi568815593r:151216820_151447460|GENSCAN_predicted_peptide_8|137_aa
MGWGIYLEEMLEDEDEASQREDFVQHLESRQRTEALEEHQQHQQGKCEHCVDVTSTVGLG
YSCYVLAKRLAAFCPQPRDLWNFKLERHDLGYLVEEISNSKALKSDFPMTRCCFPETMHT
AGLPANDGDDRACRPLE

>gi568815593r:151216820_151447460|GENSCAN_predicted_CDS_8|414_bp
atggggtggggaatctacctggaggagatgctggaggatgaggacgaggcttcccagcgt
gaagactttgttcagcatctagaaagtaggcagcgcacagaggctctggaggaacaccag
cagcaccagcaagggaaatgtgaacactgtgtagatgtgacatccacggtgggcctaggt
tactcttgctatgttttagcaaagagactggcagcattttgcccccaacctagagatctg
tggaactttaaacttgagagacatgatttagggtatctggtggaagaaatttctaacagc
aaagcactcaagagtgattttcctatgacacgctgctgcttcccagagaccatgcacact
gctggtcttcctgctaatgatggggatgatcgtgcatgccgccccttggagtaa

>gi568815593r:151216820_151447460|GENSCAN_predicted_peptide_9|90_aa
MAAPHPSHAQYVELNSEVSTCLGLWVPPPAASPWMMQPKEYPASPEGGFSNSSTRSSCCQ
DRASRTSWLQTLIYIVKGNIDLQLLSLPQP

>gi568815593r:151216820_151447460|GENSCAN_predicted_CDS_9|273_bp
atggctgctccacacccctcacatgcccaatacgtggagctaaacagtgaggtatccacc
tgcctgggcctgtgggtgcctccaccagctgccagtccctggatgatgcagcccaaagaa
taccctgccagccccgagggagggttcagcaactcctccacccggagctcctgctgccag
gacagggccagcaggacctcgtggttgcaaaccctgatctacatagtaaaaggcaacatt
gacttgcagctcctgagcctgccccaaccatga