GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:09:16

Sequence gi568815593f:134638621_134850947 : 212327 bp : 42.62% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3982   3984    3  0  0  108   81     0 0.555   1.35
 1.02 Term +   9816  10217  402  2  0   49   42   285 0.890  14.17
 1.03 PlyA +  15244  15249    6                               1.05

 2.00 Prom +  18849  18888   40                              -4.95
 2.01 Init +  20076  20115   40  2  1  114   23    29 0.872  -0.60
 2.02 Intr +  22499  22966  468  0  0   52   67   256 0.946  12.05
 2.03 Intr +  28203  28376  174  1  0   57  115   113 0.581   9.89
 2.04 Intr +  33189  33266   78  1  0   76   72   100 0.458   5.80
 2.05 Intr +  35995  36155  161  2  2   14   97   119 0.319   4.19
 2.06 Intr +  36425  36597  173  1  2   38   61   130 0.825   3.12
 2.07 Intr +  37403  37505  103  2  1   54   68    93 0.985   3.16
 2.08 Intr +  40982  41108  127  1  1  117   56    91 0.963   8.13
 2.09 Intr +  43753  43862  110  2  2   27   52    96 0.636  -1.02
 2.10 Intr +  55107  55313  207  2  0   57   72   161 0.773   9.75
 2.11 Intr +  58506  58626  121  2  1   44  106    94 0.970   5.95
 2.12 Intr +  59279  59437  159  0  0   98   97   127 0.995  13.64
 2.13 Intr +  65139  65312  174  1  0  135   94    92 0.999  13.49
 2.14 Intr +  66707  66817  111  0  0   88   86    68 0.976   6.03
 2.15 Intr +  70093  70268  176  2  2   41  110   105 0.870   6.74
 2.16 Intr +  76404  76541  138  2  0   42   94    85 0.874   4.24
 2.17 Intr +  79449  79553  105  2  0   84   84   100 0.917   8.69
 2.18 Intr +  98974  99028   55  0  1   60   67    89 0.045   1.63
 2.19 Intr +  99986 100172  187  0  1   73   94   146 0.332  11.53
 2.20 Intr + 100640 100758  119  2  2   46   81    64 0.100   0.69
 2.21 Intr + 102443 102903  461  0  2   69   91   458 0.746  36.18
 2.22 Term + 112139 112330  192  1  0   58   48    97 0.684  -0.86
 2.23 PlyA + 112737 112742    6                               1.05

 3.00 Prom + 116652 116691   40                              -5.65
 3.01 Init + 119848 120008  161  0  2   49   38   142 0.716   4.64
 3.02 Intr + 125284 125472  189  1  0   66   94   231 0.998  19.28
 3.03 Intr + 132283 132379   97  1  1   79   35   127 0.954   5.59
 3.04 Intr + 135076 135241  166  0  1   82   31   240 0.970  16.31
 3.05 Intr + 138954 139105  152  1  2   49   86   183 0.923  13.16
 3.06 Intr + 142513 142626  114  0  0   65   45   187 0.986  11.82
 3.07 Intr + 143301 143466  166  2  1   51   93   224 0.989  17.81
 3.08 Intr + 144325 144445  121  2  1   65  100    69 0.999   4.43
 3.09 Intr + 145746 145921  176  0  2   90   55   138 0.996   9.36
 3.10 Intr + 146845 146966  122  2  2   58   68   136 0.984   7.89
 3.11 Intr + 149893 149971   79  0  1   49  103    86 0.994   4.41
 3.12 Intr + 151850 151932   83  0  2   96   89    93 0.999   8.64
 3.13 Intr + 156230 156394  165  1  0   81   52   181 0.991  13.04
 3.14 Intr + 157368 157530  163  2  1   60   76   159 0.999  10.53
 3.15 Intr + 169128 169321  194  1  2   72   93   122 0.997   9.39
 3.16 Intr + 172601 172738  138  1  0   39   68   139 0.987   6.74
 3.17 Intr + 173076 173225  150  2  0   68   95   149 0.929  13.04
 3.18 Intr + 177810 177983  174  2  0   67   67   167 0.996  11.71
 3.19 Intr + 178876 179098  223  0  1   83   31   265 0.691  17.08
 3.20 Intr + 188327 188400   74  0  2   63  105   107 0.723   8.11
 3.21 Term + 207821 207985  165  1  0   -9   46   241 0.369   7.13
 3.22 PlyA + 208316 208321    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:134638621_134850947|GENSCAN_predicted_peptide_1|134_aa
MVIFTKPEERNCQSHPTKAATESQIAPRSWLCERGHVHNGGNFRSGDTRHFRPAVRVGDV
AARPGTVVGVGAPGAVRWPRGSPAGREEFAGAAAAAASPEPEVPRVLIAAARPAADRHFR
PGPPSFSLGLAAAF

>gi568815593f:134638621_134850947|GENSCAN_predicted_CDS_1|405_bp
atggtaatcttcacaaaacccgaggagaggaactgtcagtcccaccccacgaaagcggct
actgaatctcagattgccccacgatcctggctctgcgagcgaggtcacgttcacaacggc
gggaatttccgtagcggtgacacacggcacttccggccggccgtgagagtcggtgacgtg
gcggcgaggccgggcacggtcgtcggggtcggggcaccaggagctgtcaggtggcctcgg
ggcagcccggctggcagagaagagttcgccggcgcggcggcggctgctgcgagcccggag
ccggaagtgccacgtgtcctgattgcggctgcgcggccggcggctgacaggcacttccgg
ccagggcctccctccttctctctaggtttggctgccgccttctag

>gi568815593f:134638621_134850947|GENSCAN_predicted_peptide_2|1212_aa
MPNLYTILIGEEWGPVQNALLSSQESVSQGYNFQLPGSYPHPIPAKTLNPVSGQSNYGGS
QGSGQTLNRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPLNWQ
YNYPSTASQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQNSFIKSGPSVPPLVNPP
LPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLFNSAVNQEGITSNTNNGSMVV
HSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQNTTPPGATGVPPSSLNYPS
GPQAFTQTPLGANHLTTSMSGLSLQPEGLRVVNLLQERNMLPSTPLKPPVPNLHEDIQKL
NCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCRSCRTYIN
PFVSFLDQRRWKCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEVQNATIEFMAPSEYMLV
QDLLKTLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALKPREEP
NHRSSAKDIHMTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYY
YPSYHHQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLS
LPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNDVF
LGADVQAISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFS
LRLFPLFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDE
GALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSAGASLACEVVMNDKEKKQDCGREDG
VDGRRYRRRGEAGGPSGLRSVGFPASGGAASEKAAHELGTAHQPDHGLSQARERRGLSLL
NCPLVHPTCIRDSCAHILVFVFSAVNTVTYGPARKEEESQTKSKQQDSDKLNSLSVPSVS
KRVVLGDSVSTGTTDQQGGVAEVKGTQLGDKLDSFIKPPECSSDVNLELRQRNRGDLTAD
SVQRGSRHGLEQYLSRFEEAMKLRKQLISEKPSQEDGNTTEEFDSFRIFRLVGCALLALG
VRAFVCKYLSEKKIKTTVLTAALLLSGIPAEVINRSMDTYSKMGEVFTDLCVYFFTFIFC
HELLDYWGSEVP

>gi568815593f:134638621_134850947|GENSCAN_predicted_CDS_2|3639_bp
atgcccaacctctacacgattttaataggggaagaatggggtcctgtccaaaatgcattg
ctgtcttcacaagagtcagtgagccaaggatacaatttccagcttccaggatcctaccct
catccaataccagcaaagactttgaatccagtctctggacagtctaactatggtggttct
cagggatctgggcagactcttaatagaccacctgtggcctctaatccagtgacaccttcg
cttcatagtggtcctgctccccgaatgccattacctgcttctcagaacccagctactaca
ccaatgccttctagtagctttcttcctgaagccaacctgccaccacctttgaattggcaa
tataactatccatccacagcctcacaaacaaaccattgtcctcgtgcatcatcccaacca
actgtatctggaaatacaagtttaaccacaaatcatcaatatgtttcttctggatatcct
tcacttcaaaatagcttcataaagtcaggtccttctgtacctcccttagtgaatccacct
ctgcctacaacttttcaaccaggagctcctcatgggccccctccagctggaggcccaccc
ccagtgagggccctcacgcccctgacatcatcatatagagatgtaccccagcccttattt
aattcagctgtcaaccaagaaggtattacatcaaataccaataacggatctatggtggtc
cacagtagttacgacgagattgaaggaggtggcttattggcaacaccacagcttactaac
aagaatcccaaaatgagccgaagtgttggatattcatatccctccttaccacctggttat
cagaacacaacaccacctggtgcaactggagtaccaccctcttccttgaattacccaagt
gggccacaagcctttactcagactcccttaggtgctaatcatttaaccacaagcatgagt
ggattaagtctacaaccagagggtctaagagttgtcaatcttcttcaagaaagaaacatg
cttccgtcaacacctttgaagcctccagttccaaatttgcatgaagacatccagaaactc
aactgtaacccagagttatttcgatgcacgctgactagcattcctcagacgcaggcctta
ttgaataaagccaaacttcctttggggctgctgcttcatcctttcaaagacttagtgcaa
ttgcctgtggttacctccagtacaattgtgagatgccgttcatgcaggacgtacatcaat
cctttcgtcagctttcttgatcaaaggagatggaagtgtaacttatgttatcgagtcaat
gatgttcctgaagaattcttgtacaaccctttgaccagagtttatggagaacctcacaga
agaccagaagttcaaaatgctactattgagtttatggctccttcagaatacatgctcgtg
caagatttactgaaaactttgccacaaatgtttaccaagactctggagacccagagtgcc
ttgggtcctgcactgcaggctgcctttaagctgatgtctccaactggtggtcgaatgtct
gtctttcaaacacaactcccaactcttggagtgggagccctgaaaccacgagaggaacca
aaccacaggtcatctgctaaggatatacacatgacaccatccactgacttctataagaaa
ttagccttggactgttctggtcagcaagttgctgttgacttattccttctcagtggacag
tattctgatttggcttctctgggttgtatttctcggtattcagcaggtagtgtctattac
tatccctcttaccatcatcagcacaacccagtccaagtacagaaattacagaaggaacta
cagagataccttactcggaagattggctttgaggcagtcatgaggattcggtgcaccaaa
ggtctttccattcatactttccatggaaacttctttgttaggtcaaccgacttactgtct
ttgcctaacgtcaacccagacgctgggtatgcagtacagatgtcagtggaagagagtctt
actgacactcagttggtttcttttcagtcagcactcttgtatacatccagcaaaggcgaa
agaagaattcgtgttcatactttgtgtttgccagtagtttcgactctgaatgatgtcttt
cttggagctgatgttcaagcaatttcagggttattggccaatatggctgttgacagatct
atgactgccagtctgagtgacgctcgggatgctctagtgaatgcagtcattgactccctt
tcagcttaccgttcttcagtcttaagtaaccagcagcctggactcatggttcctttttct
ttgcggcttttcccactttttgtgttggctctccttaaacagaaatcattccagactggg
acaaatgcacgtctagatgaacgcatttttgctatgtgtcaagtgaaaaaccagcccttg
gtttaccttatgctcacaactcatcccagtttgtatagagttgacaatctctcagatgag
ggagcactcaacatcagtgatagaaccatacctcagccccccattcttcagctttcagtg
gagaagctgagcagagatggagctttcctcatggatgcaggctctgctggagcatcttta
gcatgcgaggtggtcatgaacgacaaggagaaaaaacaagactgtggacgggaggatgga
gtcgatggccgtcgctaccgacggcggggagaggccgggggtcccagcgggctcaggtct
gtcggcttcccagcgtcgggcggagctgcgtcggagaaagctgctcatgaactcggaaca
gcgcatcaaccggatcatgggctttcacaggcccgggagcggcgcggcctgtctttactg
aactgcccgctagttcatcctacgtgtatcagggactcttgtgctcatatcctagtgttt
gtgttcagtgccgtcaacactgtcacctacgggccggctagaaaagaagaagaaagtcaa
acaaaatcaaagcagcaggacagtgataaactgaactccctcagcgttccttccgtttca
aagcgagtagtgctgggtgattcagtcagtacaggaacaactgaccagcagggtggtgtg
gccgaggtaaaggggacccaactgggagacaaattggactcgttcattaaaccacctgag
tgcagtagtgatgtcaaccttgagctccggcagcggaacagaggggacctgacagcggac
tcggtccagaggggttcccgccatggcctagagcagtacctttccagattcgaagaagca
atgaagctaaggaaacagctgattagtgaaaaacccagtcaagaggatggaaatacaaca
gaagaatttgactcttttcgaatatttagattggtgggatgtgctcttcttgctcttgga
gtcagagcttttgtttgcaaatacttgagtgaaaagaagataaagacaacagtactaaca
gctgcacttctattgtcgggaattcctgccgaagtgataaatcgatcaatggatacctat
agcaaaatgggcgaagtcttcacagatctctgtgtctactttttcacttttatcttttgt
catgaactgcttgattattggggctctgaagtaccatga

>gi568815593f:134638621_134850947|GENSCAN_predicted_peptide_3|1023_aa
MNKERVRRKLPHYLAQIKADISLPRTPLWLWRETPSRAGEADALRSIALISRACHYRKRS
ASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRSRS
KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL
AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQASANELAVQKAKAEITR
LIKEELIRLRSESAVRPSPLNKSLPARDRRRDGVPVDFYACGTPSGRIAAYEFCFLEGTQ
PFL

>gi568815593f:134638621_134850947|GENSCAN_predicted_CDS_3|3072_bp
atgaataaagagcgtgtacggagaaagttgccgcattatttagcgcaaattaaggcagac
atcagcctgcccaggacgcctctttggctctggcgcgaaacaccctcacgggccggcgag
gctgacgcgctgcgctccatcgcactaatcagccgggcgtgccactatcgaaaacgatcg
gcatcccggggtcgctctggaagtcggtctagaagtcgctcaccctcagacaaaagaagt
aaacgtggagatgacagacggtctagaagtagagatagagataggaggagagagaggtct
cgtagcagggataaaagaagatctcggtcaagggacaggaagcgtctgagatctaggtcc
aaagagaaaactgatggtggggaaagttctaaagagaagaaaaaagacaaagatgacaag
gaggatgaaaaagaaaaagatgctggcaactttgaccagaataagctggaagaagaaatg
agaaagcgaaaagaaagagtagaaaaatggcgagaagagcaacgtaaaaaggctatggaa
aacataggagaactgaaaaaggaaatcgaagagatgaaacaagggaaaaagtggagttta
gaggacgatgatgatgacgaagatgatcctgcagaagctgaaaaggagggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa
aaatttaacatgagaagtgtaaaaggtggtgggggaaatgaaaagaagtctgggccaacg
gtcacaaaagttgtcactgttgtgacaaccaaaaaagcagttgtggattctgataagaag
aaaggtgagctgatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacagcccttacagggtatcaaacaaaacagcgaaagcttctagaacca
gttgatcatggaaaaattgagtatgagccatttaggaaaaacttctatgttgaagttcca
gaactagcaaaaatgtctcaagaagaggtaaatgtgtttcgattggaaatggagggcatt
acagttaaaggaaaaggttgccccaaaccaattaaatcctgggtccagtgtggaatttcc
atgaagatcttaaattccctcaagaagcatggctatgaaaagcccacgcccatccaaacc
caagctattcctgctataatgtctggacgagatttgattggcattgccaaaacaggaagt
ggaaagaccattgcttttctgttgcccatgtttagacacatcatggatcagaggtcatta
gaggaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacag
attactaaagagtgtaagaagttttccaagactttgggacttagagtggtctgtgtttac
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagccgctaacagtggtcgggtcacaaatctt
cgaagagtgacatatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccccaggtcatgcgcatcgtggataatgttcgtcctgatcgacagacggttatgttttca
gctactttccccagagctatggaggctttggctcgcaggatcctcagtaaacctattgaa
gtacaagttggaggcaggagtgtggtttgctcagatgtggagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagttacttgagcttctaggccattatcaagagtcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttcttaaggatttaatg
agagcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgactttaagaatgggacctgcaaacttcttgtggctacctctgttgctgcc
cgaggtctagatgtgaaacatctgattcttgtagtaaattatagctgccccaaccattat
gaggattatgtacacagagcagggcggactggaagagcaggaaacaagggttatgcttat
acttttatcacagaggatcaagctcgctatgctggtgacataattaaagctcttgaattg
tcagggactgcagtacctcctgatttagagaaactgtggagtgatttcaaagatcagcag
aaagctgaggggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaatgagaggaagaagttacaaaaagcagctcttggt
ctacaagattcagatgatgaggatgctgcagttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtaaaggatatggctgctcctggaacatcaagtgttcctgct
ccaactgcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat
gcccagaagaatttgggcatcgagtctcaggatgtgatgcagcaggccaccaatgcaatt
cttaggggtggcaccattctggctcccactgtttctgcaaaaaccattgcagaacaactt
gctgaaaagatcaatgccaagctcaattatgtgccgttagagaaacaagaagaagagaga
caggatggtggacagaatgaatcttttaagagatatgaagaagaattagagatcaatgac
ttcccacaggcaagtgccaatgaactggctgtgcagaaagcaaaggcagaaatcaccagg
ctcataaaagaagagctgatccggctgaggtcagaatccgcagtccgcccttcgccttta
aataaaagcctgccggctcgagatcggcgtcgcgatggagtgcccgtggacttctacgct
tgcggaactccgagtggacggatagcggcttatgaattttgctttttagagggtacacaa
ccctttctctag