GENSCAN 1.0	Date run:  8-Nov-116	Time: 15:04:16

Sequence gi568815593f:121751964_121952689 : 200726 bp : 35.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1376   1426   51  1  0   82   55    53 0.763   2.61
 1.02 Intr +   6700   6870  171  0  0   69   99   117 0.560  10.12
 1.03 Intr +  12103  12229  127  0  1   70   98    32 0.079   1.73
 1.04 Term +  19975  20078  104  2  2  110   44    42 0.397  -0.54
 1.05 PlyA +  20471  20476    6                               1.05

 2.00 Prom +  30099  30138   40                              -3.05
 2.01 Init +  34308  34337   30  2  0   76  116    21 0.899   3.49
 2.02 Term +  40994  41116  123  1  0   66   49   147 0.988   6.00
 2.03 PlyA +  41345  41350    6                               1.05

 3.00 Prom +  53344  53383   40                              -3.65
 3.01 Init +  53463  53549   87  2  0   78   26    67 0.264   0.19
 3.02 Term +  61336  61512  177  0  0   79   46   130 0.411   4.60
 3.03 PlyA +  62304  62309    6                               1.05

 4.07 PlyA -  62549  62544    6                               1.05
 4.06 Term -  66459  66253  207  0  0   62   39   117 0.299   0.56
 4.05 Intr -  68623  68512  112  0  1   86   11   101 0.328   1.66
 4.04 Intr -  76524  76356  169  1  1   79   88   124 0.293   9.58
 4.03 Intr -  83898  83805   94  0  1   69   85    62 0.195   2.62
 4.02 Intr -  90932  90871   62  0  2   37  119    27 0.679  -1.77
 4.01 Init -  92297  92222   76  2  1   71   94    65 0.905   6.70
 4.00 Prom -  96046  96007   40                              -7.05

 5.00 Prom +  98693  98732   40                              -7.75
 5.01 Sngl + 100001 100729  729  1  0   71   46   748 0.997  62.87
 5.02 PlyA + 100847 100852    6                               1.05

 6.05 PlyA - 102597 102592    6                               1.05
 6.04 Term - 106190 105843  348  2  0   73   55   229 0.164  11.60
 6.03 Intr - 108288 108194   95  1  2   69   12   154 0.240   4.66
 6.02 Intr - 115891 115779  113  0  2   15  100   141 0.296   7.10
 6.01 Init - 120415 120342   74  1  2   10   78   112 0.303   2.99
 6.00 Prom - 122045 122006   40                              -8.35

 7.04 PlyA - 122207 122202    6                               1.05
 7.03 Term - 124308 124183  126  0  0   94   47   121 0.931   5.90
 7.02 Intr - 138543 138404  140  1  2  107   42   163 0.904  12.86
 7.01 Init - 138665 138587   79  2  1   66   40    64 0.623   0.68
 7.00 Prom - 144389 144350   40                              -3.05

 8.00 Prom + 151417 151456   40                              -5.75
 8.01 Sngl + 155390 156091  702  1  0   77   41   224 0.507  12.56
 8.02 PlyA + 156600 156605    6                               1.05

 9.03 PlyA - 158601 158596    6                               1.05
 9.02 Term - 164955 164827  129  0  0   74   48   124 0.779   4.20
 9.01 Init - 166452 166354   99  0  0   49  116    58 0.470   5.01
 9.00 Prom - 173172 173133   40                              -3.95

10.03 PlyA - 173926 173921    6                               1.05
10.02 Term - 198352 198290   63  1  0  101   48    37 0.618  -2.09
10.01 Intr - 199754 199420  335  0  2   61   86   197 0.316  11.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  45845  46102  258  1  0   99   41   131 0.808   4.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:121751964_121952689|GENSCAN_predicted_peptide_1|150_aa
MASKRSSEYVNEDVSKERRQKNVFILAANSFAETWASYDWGVKGELTLEQQSPIPEQWTG
SVPWPMKNWAAQQELNRGIRTSAPMGLTDAGEDFFPEYKGVGGSLNPHYVPEAQGSVSGV
VQNSTSYLLHSVIYHPLVFEKEKGNIPQLS

>gi568815593f:121751964_121952689|GENSCAN_predicted_CDS_1|453_bp
atggccagtaaaaggtcttctgagtatgtcaatgaggatgtttcaaaagagcgaaggcag
aaaaatgtttttattctggcagccaacagctttgctgaaacatgggcatcctatgactgg
ggggtgaagggagaattgacattagaacagcagtccccaatccctgagcaatggactggt
agcgttccatggcctatgaagaattgggctgcacagcaggagctaaataggggcatccgt
acgtctgcccctatgggacttacagatgcgggggaggatttttttccagaatataaaggt
gtagggggatctcttaatccccactatgttccagaagcacagggctcagtttctggtgtt
gtccagaacagtaccagttacttattacattcagtgatttatcacccattggtatttgaa
aaggaaaaggggaacatcccccagctttcttag

>gi568815593f:121751964_121952689|GENSCAN_predicted_peptide_2|50_aa
MTSQYTADTKPYRESPNQLTKEEKFELGSDMGQLSMRMQITNGQQLHYPH

>gi568815593f:121751964_121952689|GENSCAN_predicted_CDS_2|153_bp
atgacttcacagtacaccgcagacaccaagccatatagggaatctcctaaccagctgact
aaagaagaaaagtttgagcttggttcagacatgggtcagcttagcatgcgaatgcaaatc
acaaacggacagcagttacactaccctcactaa

>gi568815593f:121751964_121952689|GENSCAN_predicted_peptide_3|87_aa
MEYYAAVKKDEFMSFAGTWMKQEPIILSKGCCCLLGVHFRPYSSDSLLHLEMSLKEAEEQ
QGWMSASSSGIPELEGPQPDANRIILV

>gi568815593f:121751964_121952689|GENSCAN_predicted_CDS_3|264_bp
atggaatactatgcagccgtaaaaaaggatgagttcatgtcctttgcagggacatggatg
aagcaggaacccatcattctcagcaaaggctgctgttgtttgctgggggttcacttcagg
ccctattcatctgattcgcttttacacctggagatgtcactcaaggaggccgaagaacag
caaggatggatgtctgcttcttcttctgggatccctgaacttgaggggccccaacctgat
gccaacaggattattcttgtatag

>gi568815593f:121751964_121952689|GENSCAN_predicted_peptide_4|239_aa
MWIDFEEKHCPTGTSLVGASALSLTGHEGPFKFHYGEISDFRIIKLNTTDRVIYNKQKLI
DFTVVEAGKSNARVLATEPTQMRRNQKTNPGDMTKQGSLTPPPNPPNTQNHTSSTAMDQS
QEEIPDLPEKEFRRFVEAKYRNEQQQKEKKVKMMLSNGKKILNIFDNDRSQLNDTFGQTL
QQTVSHPHPLSPPEVHLQEECQWLPVSLLETLSASRITLYPQMCQTSSTEELTTLEQSL

>gi568815593f:121751964_121952689|GENSCAN_predicted_CDS_4|720_bp
atgtggatcgattttgaggaaaagcattgtcctactggcactagccttgttggtgcctct
gcattgtctctgacaggacatgagggtccctttaaatttcactatggggaaatttctgat
tttcgtatcattaagctgaacaccacagaccgggtaatttataataaacagaagttgatt
gactttacagttgtggaggctgggaagtccaatgccagggtgctagcaactgagcctacc
caaatgagaaggaaccagaaaaccaaccctggtgatatgacaaaacaaggctctttaaca
ccgccccccaacccccccaacacacaaaatcatactagctcaacagcaatggatcaaagc
caagaagaaatccctgatttacctgaaaaagaattcaggagatttgtggaagctaaatat
agaaatgaacaacaacagaaagagaaaaaagttaaaatgatgcttagcaatggcaagaag
attttgaatatatttgataatgacagatcacaactcaatgacacattcggtcagacacta
cagcagacagtgtcacacccacatcccctcagcccacctgaagttcacctgcaggaagaa
tgccaatggctacctgtgtctctgcttgaaacattatctgcttctaggattacgctctac
ccacaaatgtgccagaccagcagtactgaagagttaacaactctggagcaatctctttaa

>gi568815593f:121751964_121952689|GENSCAN_predicted_peptide_5|242_aa
MLSCFRLLSRHISPSLASLRPVRCCFALPLRWAPGRPLDPRQIAPRRPLAAAASSRDPTG
PAAGPSRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSR
EETEHAEKLMRLQNQRGGRIRLQDIKKPEQDDWESGLHAMECALLLEKNVNQSLLELHAL
ASDKGDPHLCDFLETYYLNEQVKSIKELGDHVHNLVKMGAPDAGLAEYLFDTHTLGNENK
QN

>gi568815593f:121751964_121952689|GENSCAN_predicted_CDS_5|729_bp
atgctgtcctgcttcaggctcctctccaggcacatcagcccttcgctggcgtctctgcgc
ccggtgcgctgctgcttcgcgctcccgctgcgttgggccccggggcgccccttggacccc
aggcagatcgccccccgccgccccctggccgcagccgcctcctcccgggaccctaccggg
cccgccgccggcccctctcgggtgcgccagaacttccaccccgactccgaggctgccatc
aaccgccagatcaacctcgagctctatgcgtcctacgtgtacttgtccatggcctattac
ttctcccgggatgacgtggccttgaacaacttctccaggtatttccttcaccagtcccgg
gaggagaccgagcacgcggagaagctgatgaggctgcagaaccagcgaggaggccggatc
cgcctgcaggacatcaagaagccggaacaggacgactgggaaagcgggctgcatgccatg
gagtgtgctctactcttggaaaagaacgtgaaccagtcgttgctggaattgcacgctcta
gcctcagataaaggtgacccccatttgtgcgatttcctggaaacctactacctgaatgag
caggtgaagtctatcaaagaactaggtgaccacgtgcacaacttagtgaagatgggggcc
ccggatgctggcctggcggagtacctttttgacacacatacccttggaaatgaaaacaag
cagaactaa

>gi568815593f:121751964_121952689|GENSCAN_predicted_peptide_6|209_aa
MLQNLDSPRLLEEPRIHDEEGKLPLLSQSDSLESGSETEIGIQGVNGGVAEGSLCQPLKG
NEDNKEEQEYSEVAEEVTEHVYLLAKAKAAKEGELIENAQLRFLTDEQLVTLFTQLQTAV
RSRMHPFYITHIRAHTPLPGPLTKGNQTADRLVATAISNARHFRNVTHVNASGFKRRYSI
TWKEAKAIIQRCPTCQMVHSSSFTGGVNP

>gi568815593f:121751964_121952689|GENSCAN_predicted_CDS_6|630_bp
atgctgcagaaccttgactcaccacgtttactggaggagccacgaatccatgatgaggaa
ggcaagttgcctttactctcacagtcagactccctggaaagcggttctgagacagagatt
ggcattcaaggagtgaatgggggagtggcagagggctccttgtgtcaaccactgaaggga
aatgaagataacaaggaggaacaagagtatagcgaagtagcagaagaggttacagagcat
gtttatttgctggctaaagctaaagcggcaaaggaaggagagttaattgaaaatgctcag
ttacgatttcttacagatgaacaactggtgactttatttacccaattgcaaacagcagtt
aggagtagaatgcatcctttttacatcactcacattagagctcatacacctcttccagga
cctttaactaaagggaatcaaacggctgatcgcctagttgctactgcaatatctaatgct
agacactttcgcaatgtaactcatgttaatgcctctggtttcaaacgtagatacagcatt
acctggaaagaagctaaagctattatccagcgatgcccaacttgccaaatggtacattcc
tcatcttttacaggaggagttaatccttga

>gi568815593f:121751964_121952689|GENSCAN_predicted_peptide_7|114_aa
MLPSIGLWTVELKELISALTSPLGLPGDTQLGLAAGPAQTLLLCRWSGQPDPALTCSCAP
SHKRLSMAGRVDRCEFFPGVNLLDVEHDRTNTGEQQSSKQMIVLHTKEVGMDIG

>gi568815593f:121751964_121952689|GENSCAN_predicted_CDS_7|345_bp
atgctaccatccatcgggctgtggacagtggagctaaaagagctaattagcgcactaaca
tcccctctggggcttccaggtgacacgcagcttggtctggctgcaggccccgcacagacc
ttgctgctatgtcgatggagtggccagccagatcccgcactcacttgttcctgtgctcct
tcccacaagaggctaagcatggcaggccgagtagacaggtgtgaattcttccctggagtg
aacctcttggatgtggaacatgacagaaccaatactggtgaacaacagtcctccaagcaa
atgatagtgctacatacaaaggaagttggaatggatattggttaa

>gi568815593f:121751964_121952689|GENSCAN_predicted_peptide_8|233_aa
MTILPKAIYKFNAIPVKISSSFFTELQKTILKFKWNKKGAHMAKVTLSRKNKSGGITLPN
FKLYYKAIVTKTAWYWYKTGHTDQWTRIEKLEKKPSTYTQLIFNKANKNIKQGKDTLFNK
WCWDNWQATCRRMKLDPHLSHHTKINSKWIKDLNLRPETIKILEDSIGKTLLDIGLGKDF
MTKNPKANATKAKINRWDLIKLKSFCTAKEIITRVNRQPTEWVKIFANYASNK

>gi568815593f:121751964_121952689|GENSCAN_predicted_CDS_8|702_bp
atgaccatactgccaaaagcaatctataaattcaatgcaattcctgtcaaaatatcatca
tcattcttcacagaactacaaaaaacaattctaaaattcaaatggaataaaaaaggagcc
cacatggccaaagtaacattaagcagaaagaacaaatctggaggcatcacattacccaac
ttcaaactatactacaaggctatagttaccaaaacagcatggtactggtataaaaccgga
cacacagaccaatggaccagaatagagaaacttgaaaaaaagccaagtacttatacacaa
ctgatctttaacaaagcaaacaaaaacataaagcagggaaaggacaccctattcaacaaa
tggtgctgggataattggcaagccacatgtagaagaatgaagttggatcctcatctctca
catcatacaaaaatcaactcaaaatggatcaaagacttaaatctaagaccagaaaccata
aaaattctagaagatagcattggaaaaactcttttagacattggcttaggcaaagacttc
atgaccaagaatccgaaagcaaatgcaacaaaagcaaagataaatagatgggacttaatt
aagctaaaaagcttctgcacagcaaaagaaataatcaccagagtaaacagacaacccaca
gagtgggtgaaaatatttgcaaactatgcatccaacaaataa

>gi568815593f:121751964_121952689|GENSCAN_predicted_peptide_9|75_aa
MVYSSAKTTRRRMVFQEKCGVLLLKAGGVHTGKAFLRRNLRRFLIWHMKRLTIEEATQAV
DTADKARYEAFAGLV

>gi568815593f:121751964_121952689|GENSCAN_predicted_CDS_9|228_bp
atggtttatagttctgctaaaaccacaaggaggagaatggttttccaagagaagtgtggg
gtgctgttactaaaagctggtggggtgcacactgggaaggctttcctgagacggaatctg
agaagattcctcatatggcatatgaagaggctgaccatagaagaagcaactcaggcagtg
gatacagcagacaaggcaagatacgaagcgtttgcaggactggtgtga

>gi568815593f:121751964_121952689|GENSCAN_predicted_peptide_10|132_aa
XNPIVSAQNLLKLISNFSKVSGYKISVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKY
LGIQLTRDVKDLFEENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKAFSPYVFL
LYRSCQKLMGHY

>gi568815593f:121751964_121952689|GENSCAN_predicted_CDS_10|399_bp
naaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcagtgtacaaaaatcacaagcattcttatacaccaacaacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagggatgtgaaggacctcttcgaggagaactacaaaccattg
ctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtagga
agaatcaatatcgtgaaaatggccatactgcccaaggcattttccccatatgtgttctta
ttgtatcgcagctgtcagaaacttatgggccattactaa