GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:12:58

Sequence gi568815593f:79136651_79416304 : 279654 bp : 40.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  18374  18517  144  1  0   62   54   121 0.809   6.27
 1.02 Term +  20438  20497   60  1  0  113   32    38 0.657  -2.47
 1.03 PlyA +  21218  21223    6                               1.05

 2.00 Prom +  42658  42697   40                              -4.35
 2.01 Init +  51678  51857  180  2  0   68   76   130 0.393   9.03
 2.02 Term +  71538  71735  198  2  0   32   48   240 0.508  10.82
 2.03 PlyA +  72371  72376    6                               1.05

 3.00 Prom +  72691  72730   40                              -6.05
 3.01 Init + 100001 101032 1032  1  0  106  105  1088 0.543 106.23
 3.02 Term + 119530 119619   90  0  0   74   41   140 0.283   4.64
 3.03 PlyA + 119927 119932    6                              -0.45

 4.04 PlyA - 120400 120395    6                               1.05
 4.03 Term - 122280 121836  445  2  1   56   53   147 0.458   1.72
 4.02 Intr - 122999 122847  153  1  0   64   92    41 0.409   0.37
 4.01 Init - 123450 123071  380  0  2   79   48   148 0.402   4.37
 4.00 Prom - 136443 136404   40                              -4.65

 5.00 Prom + 139416 139455   40                              -5.95
 5.01 Init + 140793 140795    3  2  0  108   81     0 0.852   1.35
 5.02 Intr + 141260 141433  174  1  0   79   63   255 0.741  21.31
 5.03 Term + 141753 141794   42  2  0  105   38     9 0.563  -6.22
 5.04 PlyA + 142687 142692    6                               1.05

 6.04 PlyA - 143919 143914    6                               1.05
 6.03 Term - 147638 147482  157  1  1   43   39   266 0.941  13.62
 6.02 Intr - 147918 147644  275  0  2  -10  -25   279 0.431   2.21
 6.01 Init - 148268 148065  204  2  0  113   81   214 0.453  22.10
 6.00 Prom - 148357 148318   40                              -7.55

 7.00 Prom + 151042 151081   40                              -7.95
 7.01 Init + 153477 153621  145  2  1   46  100   159 0.746  13.23
 7.02 Intr + 154480 154649  170  2  2   21   77   274 0.996  18.34
 7.03 Intr + 163503 163668  166  2  1   52   80   140 0.922   8.21
 7.04 Intr + 164026 164213  188  2  2   81   63   254 0.998  20.69
 7.05 Intr + 169725 169811   87  2  0   80   94   114 0.994  10.45
 7.06 Intr + 177607 178201  595  0  1   60   94   347 0.895  23.71
 7.07 Term + 179350 179657  308  2  2   73   42   248 0.997  12.99
 7.08 PlyA + 183654 183659    6                               1.05

 8.00 Prom + 194067 194106   40                              -5.05
 8.01 Init + 197567 197618   52  1  1   74   87    67 0.188   6.57
 8.02 Intr + 198396 198522  127  1  1   31   85   124 0.086   5.22
 8.03 Term + 204001 204292  292  1  1   57   41   188 0.053   4.83
 8.04 PlyA + 204526 204531    6                               1.05

 9.04 PlyA - 205860 205855    6                               1.05
 9.03 Term - 206601 206531   71  1  2   87   48    91 0.097   2.12
 9.02 Intr - 227933 227807  127  2  1   26   71    83 0.171  -0.27
 9.01 Init - 231882 231787   96  0  0   54   78   135 0.943   9.46
 9.00 Prom - 237010 236971   40                              -6.05

10.05 PlyA - 237335 237330    6                               1.05
10.04 Term - 239547 239359  189  0  0   40   49   260 0.784  13.77
10.03 Intr - 260253 260173   81  0  0   97   99    82 0.977   9.12
10.02 Intr - 260987 260877  111  2  0   95   53    97 0.971   6.56
10.01 Intr - 265405 265249  157  0  1   49   58   158 0.397   7.99

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 240517 240515    3  1  0  113   22     0 0.989  -4.05


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:79136651_79416304|GENSCAN_predicted_peptide_1|67_aa
MAFEKLKKIKPKERGTKDEAGEVGKDSVTKHLAGHKDFGLHPKSSGKMLLTQFQPLSSLT
QTMETDL

>gi568815593f:79136651_79416304|GENSCAN_predicted_CDS_1|204_bp
atggcctttgagaaactaaagaagattaagccaaaagagagagggactaaagatgaggca
ggagaggtaggcaaggattctgtcacaaagcaccttgcaggccataaggattttggactt
catcctaagagcagtgggaaaatgctactaactcagttccagcccttatcctctctcacc
cagacaatggaaacagatttataa

>gi568815593f:79136651_79416304|GENSCAN_predicted_peptide_2|125_aa
MKVVAMASVEGKWRVSEGQEVGVRQVVAEEWVGPTDRVTPPAGQAISVDFVYRKQASYVL
PGQQSKTLSQKKKKKKEEKEEEEGEGGEEGQEEGEEKVEEEEGREGEEGEGGEEEEDDDD
STSQI

>gi568815593f:79136651_79416304|GENSCAN_predicted_CDS_2|378_bp
atgaaggtggtggcaatggccagtgttgaggggaaatggagagtatctgaaggacaggag
gtaggagtaagacaggtggtagcagaggaatgggtgggacccactgacagagtgacacct
ccagctggccaagctatcagtgtggactttgtgtataggaaacaagcttcatacgtattg
cctgggcaacagagcaagactctgtctcaaaaaaaaaaaaaaaaaaaagaagaaaaggaa
gaggaagaaggagaaggaggagaagaaggacaggaagaaggagaagagaaggtggaggag
gaggaaggaagagaaggagaagaaggagaaggaggagaagaagaagaagacgacgacgac
agtacatctcaaatttaa

>gi568815593f:79136651_79416304|GENSCAN_predicted_peptide_3|373_aa
MSFALEETLESDWVAVRPHVFDEREKHKFVFIVAWNEIEGKFAITCHNRTAQRQRSGSRE
QAGARGGAEAGGAASDGSRGPGSPAGRGRPEATASATLVRSPGPRRSSAWAEGGSPRSTR
SLLGDPRLRSPGSKGAESRLRSPVRAKPIPGQKTSEADDAAGAAAAAARPAPREAQVSSV
RIVSASGTVSEEIEVLEMVKEDEAPLALSDAEQPPPATELESPAEECSWAGLFSFQDLRA
VHQQLCSVNSQLEPCLPVFPEEPSGMWTVLFGGAPEMTEQEIDTLCYQLQVYLGHGLDTC
GWKILSQVLFTETDDPEEYYESLSELRQKGYEEVLQRARKRIQEWQRNLIPEEQAQGEYW
QTAADVPFRPKGS

>gi568815593f:79136651_79416304|GENSCAN_predicted_CDS_3|1122_bp
atgtcgttcgcgctggaggagacgctcgagtcggactgggtggctgtgcggccccatgtg
ttcgacgagcgcgagaaacacaaattcgtctttattgtggcctggaacgagattgagggc
aagtttgccataacctgccacaaccggacggcccagaggcagaggagcggctcccgggag
caagcgggggcgcgagggggcgccgaggccggcggagctgcgtccgacgggagccgcggg
cccggcagcccggcgggcaggggtcggcccgaggccactgcctctgcaactctggttagg
agccccgggccccggcggagctcggcctgggcggagggcggctctcctcggagcactcgc
agccttctgggggacccgcggctgcggagtcctggcagcaaaggggcggagagtcgtctt
aggagcccagtgcgggccaaacccatcccgggtcagaaaacatctgaagccgacgatgcg
gcgggggcagccgctgcagcagcccggccggcgcccagagaggcccaggtgtcctctgta
cggatagtgagcgcctctgggacggtctccgaggagatagaggtgctggaaatggtgaag
gaggacgaggcacctctggcgctctcggacgcggagcagccgccgcccgccaccgagctg
gagtctccggccgaagagtgcagctgggccggactgttttctttccaggacctgcgcgcc
gtgcaccagcagctgtgctcggtgaactcgcagttggagccgtgcctgccggtgttcccc
gaggaaccttcgggcatgtggactgtgctgtttgggggcgcccccgagatgaccgagcag
gaaatcgacactctgtgttaccagctccaggtctacctgggccacggcctggacacctgc
ggctggaagatcctctcccaggtgctcttcaccgagaccgatgatcccgaggagtattac
gaaagcctcagcgagctgcggcagaagggctacgaagaagtgcttcagcgggccaggaag
cgcatccaggagtggcagaggaacctcatcccagaggaacaagcccagggggagtactgg
cagactgctgctgatgttcccttcaggcccaagggctcttaa

>gi568815593f:79136651_79416304|GENSCAN_predicted_peptide_4|325_aa
MPPVPRPLSWETLQWGQAELPASRVAVQSGTEGQAERGPEAEVGPGCAYAMLHGASGSQG
HAGFPPSQGWLQLPKLQLQIQASLHSPGPGKAPPCPCRLGGVCSHCLDFPQYQRLFHSQG
KVEANPSLLRTLGTNEHRREAKGVLRAAQRWPTDTPWHKQPGHHKWQQEADKLLGRSGTR
TQDPGNGRAKRAVTQTGLKHPLPTMLQPTRGQKSCGPLGSPDLGAPQARAVTPSLRRCSS
WSLQASRHHTAFPGVSHGNCLWYPWSSHSLIGSWCQYWHLELPAPPPPECLVVCSGQTPR
SLTHPSPLHDWLSLGRHGTQTGSRS

>gi568815593f:79136651_79416304|GENSCAN_predicted_CDS_4|978_bp
atgccacctgtacctcgaccactgtcctgggagacactgcaatggggccaggctgagttg
cctgccagcagggtagcagtacagtcgggcactgaggggcaggcagagaggggccctgag
gcagaggtgggcccaggatgtgcatatgccatgctccatggagccagtgggagccagggg
catgcaggattcccaccctcccaggggtggctacagctgcccaagctacagctgcagatc
caggcatctctgcactctccggggcctgggaaggccccaccttgcccctgcaggctcgga
ggtgtctgctcccactgcctggactttcctcaatatcagcgcctgttccactcacaaggc
aaagttgaggccaaccctagcctgctgcggactttgggcaccaatgagcacagaagagag
gccaagggggtgctgagggcagctcagcgctggcccacagacactccttggcacaaacag
cctgggcaccataaatggcagcaggaggcagacaagctcctgggcaggagtgggacaaga
actcaagacccagggaatggcagggctaaaagagctgtaacacaaacagggctgaaacac
cccttgcccacaatgttacagccaacaagaggacagaagagctgtggccctctggggagc
ccagacctaggagctccccaagccagagcggtgacaccctctttaaggcgctgcagttcc
tggagtctccaagcttccaggcaccacactgcattccctggtgtcagccatggaaactgc
ttatggtatccctggtccagccacagcctcatagggagctggtgccagtactggcacctg
gagctgcccgccccaccaccgccagagtgcctggttgtatgcagtggccagaccccacgc
tcactaacacacccctcaccgctccatgactggctctcccttggcaggcatgggacccag
actggtagcaggagctga

>gi568815593f:79136651_79416304|GENSCAN_predicted_peptide_5|72_aa
MLLDKHKNTESMVELLDLYQMEDEAYSSLAEATTELYQYLLQPFRDMRELAMLRRQQIKS
CLLFNVLETVYS

>gi568815593f:79136651_79416304|GENSCAN_predicted_CDS_5|219_bp
atgctcttggataagcacaagaatacagagagcatggtggagcttctggacttgtatcag
atggaggatgaagcctacagcagccttgcagaagctacaaccgaactctatcagtattta
ctacagccattccgagacatgagagaacttgccatgctacgaagacagcagatcaagtca
tgtctcctctttaatgttttggagactgtgtactcttag

>gi568815593f:79136651_79416304|GENSCAN_predicted_peptide_6|211_aa
MAVGKNKHLTKGSKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKMLITRTQGTKIASD
GLKGRVFETMIEAHVDVRTIDGYLLRLFCVGFTKKRNNQIQKTSYAQHQRVRQIRKKMME
IMTREVQTNALKEVVNKLIPDSIGKDIEKACQSILSMMSSKVKMLKKPKFELGKLMELHG
EGSSSGKATGDERGAKVERADGFEPPVQESV

>gi568815593f:79136651_79416304|GENSCAN_predicted_CDS_6|636_bp
atggcggttggcaagaacaagcaccttacgaaaggcagcaaaaagggggccaagaagaaa
gtggttgatccattttctaagaaagattggtatgatgtgaaagcacctgctatgttcaat
ataagaaatattggaaagatgctcatcaccaggacccaaggaaccaaaattgcatctgat
ggtctcaagggtcgtgtgtttgaaacaatgattgaagctcacgttgacgtcaggactatt
gatggttacttgcttcgtctgttctgtgttggttttactaaaaaacgcaacaatcagata
cagaagacctcttatgcccagcaccaacgggtccgccaaatccggaagaagatgatggaa
atcatgacccgagaggtgcagacaaatgccttgaaagaagtggtcaataaattgattcca
gacagcattggaaaagacatagaaaaggcttgccaatctatcctctccatgatgtcttca
aaagtaaaaatgctgaagaagcccaagtttgaattgggaaagctcatggagcttcatggt
gaaggcagtagttctggaaaagccactggggacgagagaggtgctaaagttgaacgagct
gatggttttgaaccaccagtccaagaatctgtttaa

>gi568815593f:79136651_79416304|GENSCAN_predicted_peptide_7|552_aa
MENDYLGPRRIESLQKEDADWQRKAHMAVLSIQDLTVKYFEITAKAQKAVYDRMRADQKK
FGKASWAAAAERMEKLQYAVSKETLQMMRAKEICLEQRKHALKEEMQSLRGGTEAIARLD
QLEADYYDLQLQLYEVQFEILKCEELLLTAQLESIKRLISEKRDEVVYYDTYESMEAMLE
KEEMAASAYLQREELQKLQQKARQLEARRGRVSAKKSYLRNKKEICIAKHNEKIQQRTRI
EDEYRTHHTVQLRYPGQVILKSTRLRLAHARRKGAASPVLQEDHCDSLPSVLQVEEKTEE
VGEGRVKRGPSQTTEPQSLVQLEDTSLTQLEATSLPLSGVTSELPPTISLPLLNNNLEPC
SVTINPLPSPLPPTPPPPPPPPPPPPPPPLPVAKDSGPETLEKDLPRKEGNEKRIPKSAS
APSAHLFDSSQLVSARKKLRKTAEGLQRRRVSSPMDEVLASLKRGSFHLKKVEQRTLPPF
PDEDDSNNILAQIRKGVKLKKVQKDVLRESFTLLPDTDPLTRSIHEALRRIKEASPESED
EEEALPCTDWEN

>gi568815593f:79136651_79416304|GENSCAN_predicted_CDS_7|1659_bp
atggagaatgattatctgggacctcgaagaattgagagtctacaaaaagaagatgctgat
tggcagcggaaagctcacatggctgtactgtctattcaagatcttactgtcaagtacttt
gaaataacagctaaagctcaaaaagctgtgtatgatcgaatgcgagctgatcagaagaaa
tttggtaaagcatcatgggcagcggctgctgaacggatggaaaaactccagtatgcagtt
tctaaggaaactttgcagatgatgagagctaaagagatatgcttggaacagcggaaacat
gcactaaaggaagagatgcagagtttgcggggtggtacagaagcgatagcacgattggat
cagttagaagctgattattatgatctgcaacttcagttgtatgaagtacagtttgaaatc
ttgaagtgtgaagagttactattgacagcgcaactagaaagcatcaaaagacttatatca
gaaaaaagagatgaagtggtatactatgacacttacgaaagcatggaggccatgctggag
aaggaagagatggcagcatctgcgtacttacagagagaagagctgcagaaacttcagcag
aaagcacgccagctggaagcaagacgtggacgggtttctgccaagaaatcctacctcaga
aataaaaaggaaatatgtattgcaaaacacaatgaaaaaatccaacagcgcactcggatt
gaagatgaatatagaacccatcacacagtacaactaaggtatcctgggcaagtcatactt
aaatcaaccagattacgactagctcatgcaagaagaaaaggtgcagcaagtcctgttctc
caagaggatcattgtgactctttaccaagtgtgttacaggtagaagagaaaactgaagag
gtgggagaaggaagagtcaagcgtgggccatcacagacaacagaaccccagagccttgtg
caacttgaagatacttcattaacacaacttgaagccacctcattacctctcagtggtgtt
acctctgaactgcctcccactatatctcttccacttttgaataacaacctcgaaccatgt
tctgttaccataaatccactcccatcccctcttcctccaacaccaccacctcccccacct
cctccccctcccccaccaccaccacctctgcctgttgctaaggacagtggcccagagaca
ctggagaaagatctgcctagaaaggaggggaatgagaagaggatcccaaagtcagccagt
gccccctcagcacacctctttgacagcagccagctggtcagtgcacggaagaagctcaga
aagactgctgaaggtttgcagaggaggagagtgagctcacccatggatgaggtgctagcc
tccttgaagcgtggtagttttcatctgaaaaaggttgaacagcgaactctgcctcctttt
cctgatgaagatgatagtaataatatcttggcacaaataaggaaaggggtaaaattgaag
aaggtacagaaggatgttttgagagaatccttcacacttctacccgatacagaccctcta
acacggagcatccatgaagctcttagaagaattaaagaagcatccccagagtcagaggac
gaagaggaggctttaccttgcacagactgggagaactaa

>gi568815593f:79136651_79416304|GENSCAN_predicted_peptide_8|156_aa
MSQRRSGLNQQEQEEVEAIRVGLPFMGSRRFPDGREERSSKMRTQECSHSGQLGGHWVPW
FLAPLQWVRTSSFSSEKFVITDHLKPTSVNSSESFSVQLCSIAGEELRSFGGEEALWFLE
FSAFLLGFSPSLWFYLPLVFDAGDLQMRFWCGCPFS

>gi568815593f:79136651_79416304|GENSCAN_predicted_CDS_8|471_bp
atgagccagaggagatctggactcaaccaacaggaacaagaggaggttgaagcaattcga
gttgggcttcctttcatgggcagcagaagattccctgatggtcgtgaggagcgttccagt
aagatgaggactcaggagtgctcccacagtgggcaacttggaggtcactgggtaccctgg
tttttagctcccttgcaatgggttcgaacatcctcctttagctcagagaagtttgttatt
accgaccatctgaagcctacttctgtcaactcgtcagagtcattctctgtccagctttgc
tccattgctggcgaggagctccgatcctttggaggagaagaggcactctggtttttggaa
ttttcagcttttctgctcggtttctccccatctttgtggttttatctacctttggtcttt
gatgctggtgacctacagatgcggttttggtgtggatgtccttttagttga

>gi568815593f:79136651_79416304|GENSCAN_predicted_peptide_9|97_aa
MDRYSPKHRMLGKDVANDGDGEVAKGQSRKDFALCQALECKDGKTQPYPPEAYNLMREAC
ILTKKQSYINAVMKEISRKSVAEFGRRLQVVRQSTPI

>gi568815593f:79136651_79416304|GENSCAN_predicted_CDS_9|294_bp
atggatcgatacagcccgaagcataggatgttagggaaggacgtggcaaatgatggggat
ggagaagtagccaaaggccagagcaggaaggactttgcactctgccaggcactggaatgc
aaagatgggaagacacagccctatcctccagaagcttataatctaatgagggaagcatgc
atattaaccaagaagcaatcatacatcaatgctgttatgaaagagatttcccggaaatca
gttgcagagtttggcagaagacttcaggttgtaagacagtcaacccccatataa

>gi568815593f:79136651_79416304|GENSCAN_predicted_peptide_10|179_aa
XSAISKHWEAELATLKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTELECV
SSQANAVHTHKTELNQTIQELEETLKLKEEEIERLKQEIDNARELQEQRDSLTQKLQEVE
IRNKDLEGQLSDLEQRLEKSQNEQEAFRNNLKTLLEILDGKIFELTELRDNLAKLLECS

>gi568815593f:79136651_79416304|GENSCAN_predicted_CDS_10|540_bp
nnttcagcaatcagcaaacattgggaggctgaactggctaccctcaaaggaaataatgcc
aaactcactgcagccctgctggagtccactgccaatgtgaaacaatggaaacagcaactt
gctgcctatcaagaggaagcagaacgtctgcacaagcgggtgactgaacttgaatgtgtt
agtagccaagcaaatgcagtacatactcataagacagaattaaatcagacaatacaagaa
ctggaagagacactgaaactgaaggaagaggaaatagaaaggttaaaacaagaaattgat
aatgccagagaactacaagaacagagggattctttgactcagaaactacaggaagtagaa
attcggaacaaagacctggagggacaactgtctgacttagagcaacgtctggagaaaagt
cagaatgaacaagaagcttttcgcaataacctgaagacactcttagaaattctggatgga
aagatatttgaactaacagaattacgagataacttggccaagctactagaatgcagctaa