GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:03:38

Sequence gi568815594r:174391959_174622451 : 230493 bp : 37.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1349   1344    6                               1.05
 1.02 Term -   2009   1821  189  2  0   58   42    93 0.116  -1.83
 1.01 Init -   9670   9482  189  1  0   73   98   171 0.657  15.66
 1.00 Prom -  20423  20384   40                              -3.65

 2.05 PlyA -  21187  21182    6                               1.05
 2.04 Term -  21973  21363  611  2  2   48   38   219 0.803   6.57
 2.03 Intr -  22766  22122  645  0  0   44   40   228 0.157   4.62
 2.02 Intr -  24594  24347  248  2  2  -41   58   178 0.086  -1.92
 2.01 Init -  25058  24673  386  2  2   88   44   336 0.459  25.56
 2.00 Prom -  36786  36747   40                              -5.55

 3.03 PlyA -  37084  37079    6                               1.05
 3.02 Term -  41049  40917  133  2  1   92   52    94 0.932   2.78
 3.01 Init -  42777  42614  164  0  2   46   91    78 0.453   3.15
 3.00 Prom -  45918  45879   40                              -5.35

 4.03 PlyA -  46724  46719    6                               1.05
 4.02 Term -  50235  49634  602  1  2   25   47   256 0.848   8.90
 4.01 Init -  50600  50390  211  2  1   49   57   175 0.896   9.49
 4.00 Prom -  51135  51096   40                              -7.05

 5.05 PlyA -  51258  51253    6                               1.05
 5.04 Term -  53146  53048   99  1  0   94   49    89 0.239   2.75
 5.03 Intr -  82819  82684  136  0  1   92   68   136 0.583  11.65
 5.02 Intr -  91287  91181  107  0  2   47  115    46 0.515   1.29
 5.01 Init -  95517  95380  138  0  0   91   75   109 0.659  10.09
 5.00 Prom -  98649  98610   40                              -7.95

 6.08 PlyA -  99079  99074    6                               1.05
 6.07 Term - 100136  99998  139  1  1   86   47   102 0.932   2.35
 6.06 Intr - 101356 101193  164  1  2   52   83    96 0.925   3.35
 6.05 Intr - 103666 103590   77  2  2   93   77    46 0.046   2.32
 6.04 Intr - 116834 116738   97  2  1   43  110    92 0.399   5.56
 6.03 Intr - 126119 126013  107  0  2   30   97    55 0.484  -0.39
 6.02 Intr - 130109 129986  124  2  1  100   94   174 0.984  18.44
 6.01 Init - 130493 130401   93  2  0   87  121   162 0.994  19.86
 6.00 Prom - 138548 138509   40                              -5.55

 7.00 Prom + 138701 138740   40                              -6.15
 7.01 Init + 147111 147201   91  2  1   70   66    87 0.507   5.40
 7.02 Term + 148358 148584  227  0  2   90   39    98 0.831   1.06
 7.03 PlyA + 149073 149078    6                               1.05

 8.05 PlyA - 149695 149690    6                               1.05
 8.04 Term - 155908 155688  221  2  2   74   47   117 0.090   2.42
 8.03 Intr - 163220 163158   63  0  0   60  101    80 0.038   4.27
 8.02 Intr - 171855 171696  160  0  1   31   83    97 0.006   2.14
 8.01 Init - 179008 178976   33  1  0   77   82    49 0.006   1.24
 8.00 Prom - 185279 185240   40                              -3.35

 9.00 Prom + 212074 212113   40                              -3.35
 9.01 Sngl + 227214 227519  306  2  0   88   48   201 0.975  11.72
 9.02 PlyA + 227595 227600    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 174991 175066   76  0  1   95   89    51 0.944   7.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:174391959_174622451|GENSCAN_predicted_peptide_1|125_aa
MGPGDQRSAYGGPTLTPASEFPYYLLIIIGHFPERGMWQDNRIIVERRSAGKQVNECLCI
INKKQKNNCKTHMGPQETPIAKAFITKNNKAKGIIQLDFKIYCKAVVIKTECTGIKTDTL
TNRMV

>gi568815594r:174391959_174622451|GENSCAN_predicted_CDS_1|378_bp
atgggcccaggggaccagcgttcagcatacggaggacccacgctgacaccggcctctgaa
ttcccttactatttattgatcattatcgggcatttcccggagagggggatgtggcaggac
aataggataatagtggagagaagatcagcaggtaaacaggtgaacgaatgtctctgcatc
ataaacaagaaacagaaaaacaattgtaaaactcatatgggtccacaagagaccccaata
gccaaagcattcataaccaaaaataacaaagctaaaggcatcatacaactggatttcaaa
atatattgcaaagctgtagtaatcaaaacagaatgtactggcataaaaacagacacactg
accaaccgaatggtatag

>gi568815594r:174391959_174622451|GENSCAN_predicted_peptide_2|629_aa
MGKKQSRKAENSKNQSTSPTPKERSSSPAMEQSWTENDFDELREEGFRRSNFSQLKEEVQ
THHKEAKNLEKRLDKWLTRITSVEKSLNDLMELKTTARELRDEYTSVSSQFDQLEERVSV
IEDQMNAVKPNLHPIGVPESDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQRTPQS
YSSRRATPRHIIVRFTKFEMKEKMLRAARKKEIQTTIREYYKHLYANKLENLEEMDKFLD
TYILPRLNQEEVESLNRRITGSEVKAIINSLPTKKSPGPEVFTAKFYQRYKEELVPFLLK
LFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRTISLMNNDAKILNKILANQIQQH
IKKLIHHDQVGFIPGMQGWFNISKSINIIQHINRTKDKNHMIISIDAKKAFDKIQQPFML
KTLNKLVLEVLARAIRQDKEIKGIQLGKEEVKLSLFADDMTVYLENPIVSAQNLLKLISN
FSKVSGYKINVQISQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDMKDLFKEN
YKPLLNEIKEDTNKWKNIPFSWIGRISIMKMTILPKVIYRFNAILHQATNDFLHRIGKNY
FKVHMEPKKSPHCQNNPKPKEQSWRHHAT

>gi568815594r:174391959_174622451|GENSCAN_predicted_CDS_2|1890_bp
atggggaaaaaacagagcagaaaagctgaaaattctaaaaatcagagcacctctcccact
ccaaaggaacgcagctcctcgccagcaatggaacaaagctggacggagaatgactttgac
gagttgagagaagaaggcttcagacgatcaaacttctcccagctaaaggaggaagttcaa
acccatcacaaagaagctaaaaaccttgaaaaaagattagacaaatggctaactagaata
accagtgtagagaagtccttaaatgacctgatggagctgaaaaccacggcacgagaacta
cgtgatgaatacacaagcgtcagtagccaatttgatcaactggaagaaagggtatcagtg
attgaagatcaaatgaatgcagtgaaaccaaatctacatccgattggtgtacctgaaagt
gatggagagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttc
cccaacctagcaaggcaggcaaacattcagattcaggaaatacagagaacgccacaaagt
tactcctcgagaagagcaactccaagacacataattgtcagattcaccaaatttgaaatg
aaggaaaaaatgttaagggcagccagaaagaaagaaatacaaactaccatcagagaatac
tacaaacacctctatgcaaataaactagaaaatctagaagaaatggataaattcctggac
acatacatcctcccaagattaaaccaggaagaagttgaatccctgaatagacgaataaca
ggctctgaagttaaggcaataattaatagcctaccaaccaaaaaaagtccaggaccagaa
gtattcacagccaaattctaccagaggtacaaggaggagctggtaccattccttctgaaa
ctattccaatcaatagaaaaagagggaatcctccctaactcattttatgaggccagcatc
attctgataccaaagccgggcagagacacaacaaaaaaagagaattttagaacaatatcc
ctgatgaacaacgatgcaaaaatcctcaataaaatactggcaaaccaaatccagcagcac
atcaaaaagcttatccaccatgaccaagtgggcttcatccctgggatgcaaggctggttc
aacataagcaaatcaataaacataatccagcatataaacagaaccaaagacaaaaaccac
atgattatctcaatagatgcaaaaaaggcgtttgacaaaattcaacaacccttcatgcta
aaaactctcaataaactagtgttggaagttctggccagggcaatcaggcaggacaaagaa
ataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatg
actgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaac
ttcagcaaagtctcaggatacaaaatcaatgtgcaaatatcacaagcattcttatacacc
aataacagacaaacagagagtcaaatcatgagtgaactcccattcacaattgcttcaaag
agaataaaatacctaggaatccaacttacaagggatatgaaggacctcttcaaggagaac
tacaaaccactgctcaacgaaataaaagaggatacaaacaaatggaagaacattccattc
tcatggataggaagaatcagtatcatgaaaatgaccatactgcccaaggtaatttataga
ttcaatgccatcctccatcaagctaccaatgactttcttcacagaattggaaaaaactac
tttaaagttcatatggaaccaaaaaagagcccgcattgccaaaacaatcctaagccaaaa
gaacaaagctggaggcatcatgctacctga

>gi568815594r:174391959_174622451|GENSCAN_predicted_peptide_3|98_aa
MNWMLMADPVCSHYGVQAMWILTTFPSEGLSSEFMCLKALESLFAHPAATGNHFRRISHG
GYAEGMQSPTFHYRIQRQKTHDPSSVNETVPLLLMWTK

>gi568815594r:174391959_174622451|GENSCAN_predicted_CDS_3|297_bp
atgaattggatgttaatggctgacccagtgtgctcccattatggagttcaagccatgtgg
attctaactacattccccagcgaaggattgagctctgaattcatgtgcctaaaggcctta
gagtctctttttgcacacccagcagccacaggaaaccatttcaggagaatctcccatggg
ggctatgcagaagggatgcagagccccaccttccactacagaatccaaaggcagaaaaca
catgacccaagttcagtcaatgagactgtcccactacttttgatgtggaccaaatga

>gi568815594r:174391959_174622451|GENSCAN_predicted_peptide_4|270_aa
MWKQHWNWVTGRDWNSLKGLEEDEKIWESFDLPRDLLNGFAQNADTHMDNKIQAEVFSDG
HEELVGNWSKGKQIIKVWKICTLTVGLKKKKFSGEKFKPAVEICISNKEPNVNFQDHGEN
VSRPCQRTSWQALPSQAQRPRRKKWFRGLGPGSSCCVQSRDLVPCVQAAPAVAERSQRTA
QAVASEGRSSKPWQLPCGVESVDAQKSRIEVWEPPPRFQKMYGNGCMPRQKFAEGVGFSW
RTSARTVQKENVGSEPPHRIPAGALPSKKI

>gi568815594r:174391959_174622451|GENSCAN_predicted_CDS_4|813_bp
atgtggaagcaacattggaactgggtaacaggcagagattggaacagtttgaagggcttg
gaagaagacgagaaaatatgggaaagttttgatcttcctagagacttgttgaatggcttt
gcccaaaatgctgatacacatatggacaataaaatccaggctgaggtcttctcagatgga
catgaggaacttgttgggaactggagcaaagggaagcagatcataaaagtttggaaaatt
tgcaccctgactgtgggattaaaaaaaaaaaaattttctggggagaaattcaagccagct
gtagaaatttgcataagtaacaaggagcctaatgttaatttccaagaccatggggaaaat
gtctccaggccatgtcagagaacttcatggcaggccctcccatctcaggcccagaggccc
agaaggaaaaagtggtttcgaggactgggcccagggtcctcatgctgtgtgcagtctagg
gacttagtgccctgtgtccaagccgctccagccgtggctgaaaggagccaacgtacagct
caggctgtggcttcagagggtagaagctccaagccttggcagcttccatgtggtgttgag
tctgtggatgcacagaagtcaagaattgaggtttgggaacctccacctagatttcagaag
atgtatggaaatggctgcatgcctaggcaaaagtttgctgaaggggtgggattctcatgg
agaacctctgctaggacagtgcaaaaggaaaacgtggggtcagagcctccacacagaatc
cctgctggtgcactgcctagtaaaaaaatttga

>gi568815594r:174391959_174622451|GENSCAN_predicted_peptide_5|159_aa
MGNEATQQQQEGSITSRTGAIQGTTSAKEPMGGCQSKLGLQSRGCQSCLNGPTWVQGWAP
VLGNVNSAWKPTFQQQRYPLERCCKRLEAVGFQPRRGTCKTAPVAVAVKFVLALCYRKEV
FQCLGQWNHCPVLPVNQCVKKGVYDILPAGGHDQDRFIN

>gi568815594r:174391959_174622451|GENSCAN_predicted_CDS_5|480_bp
atgggtaatgaggcaacccagcaacagcaggaaggctctatcacttcaagaactggtgca
attcagggtactaccagtgccaaggaaccaatgggaggctgccaatcaaagctggggcta
cagagcaggggctgtcagagctgcttaaacggccccacctgggtgcaaggctgggctcca
gtgctgggaaatgtaaattctgcctggaaacccactttccagcaacagcgctaccctttg
gaaagatgttgtaaaagactggaggcagttggcttccagccacgacgtggcacatgcaaa
acagcaccagtggcggtagctgtgaaatttgtgcttgccttatgttaccgaaaggaggta
ttccagtgccttgggcaatggaatcactgtcctgtgctgcctgttaaccaatgtgtgaaa
aaaggcgtttacgatattttgccagcagggggtcatgatcaggaccgatttatcaattag

>gi568815594r:174391959_174622451|GENSCAN_predicted_peptide_6|266_aa
MHVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALDEQFEPQKTLF
IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLD
YMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNA
ICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNG
AIMKITTSKGIHFQDYDTTPFQAKTQ

>gi568815594r:174391959_174622451|GENSCAN_predicted_CDS_6|801_bp
atgcacgtgaacggcaaagtggcgctggtgaccggcgcggctcagggcataggcagagcc
tttgcagaggcgctgctgcttaagggcgccaaggtagcgctggtggattggaatcttgaa
gcaggtgtacagtgtaaagctgccctggatgagcagtttgaacctcagaagactctgttc
atccagtgcgatgtggctgaccagcaacaactgagagacacttttagaaaagttgtagac
cactttggaagactggacattttggtcaataatgctggagtgaataatgagaaaaactgg
gaaaaaactctgcaaattaatttggtttctgttatcagtggaacctatcttggtttggat
tacatgagtaagcaaaatggaggtgaaggcggcatcattatcaatatgtcatctttagca
ggactcatgcccgttgcacagcagccggtttattgtgcttcaaagcatggcatagttgga
ttcacacgctcagcagcgttggctgctaatcttatgaacagtggtgtgagactgaatgcc
atttgtccaggctttgttaacacagccatccttgaatcaattgaaaaagaagaaaacatg
ggacaatatatagaatataaggatcatatcaaggatatgattaaatactatggaattttg
gacccaccattgattgccaatggattgataacactcattgaagatgatgctttaaatggt
gctattatgaagatcacaacttctaagggaattcattttcaagactatgatacaactcca
tttcaagcaaaaacccaatga

>gi568815594r:174391959_174622451|GENSCAN_predicted_peptide_7|105_aa
MGNLSGGRGEMAYATETGSDLNLARVLACAGGASWDLQVTKKGDPGTGIVSLGVPEVEAE
SLLGGASPQTCLFAVGRRPPHIPSHTHHLKPDSVSSEYDHLLPIF

>gi568815594r:174391959_174622451|GENSCAN_predicted_CDS_7|318_bp
atggggaacctgtcaggtggtagaggtgaaatggcttatgccacagaaactggcagtgac
ctaaatctggcaagggtcctggcctgcgcaggtggagcgagctgggacttgcaggtgacc
aagaagggggatcccggaaccggaattgtctcccttggcgttccggaagtagaagcagag
tcattgctgggtggcgccagccctcagacttgcctctttgcagtaggaagaaggcctccc
cacataccttcccacactcatcaccttaagccagactcggtgtccagtgaatatgaccat
ctcttgcccattttctaa

>gi568815594r:174391959_174622451|GENSCAN_predicted_peptide_8|158_aa
MAPVSMVLQGLLWMTAKGTEGNLHGDERFDKKEQWLEAQAITILYLQKQREPATLTKGTS
GTHRAGSFWWVRGLADFKNGAADLRGTRCKLSVDLPFQGLQDGGPLLTAPLGSAPVGTLC
GCSDPIFPFHTLLAEVLHQGFTPAADFYLDSQAFPYIL

>gi568815594r:174391959_174622451|GENSCAN_predicted_CDS_8|477_bp
atggcgcccgtgagcatggtactgcaaggtctgctgtggatgactgcaaaaggcacagaa
ggaaatcttcatggtgacgaaaggtttgataaaaaagaacaatggctagaagctcaagca
attacaattctttacctacagaaacagagagaaccagccaccttgaccaaaggaacatct
ggcacacatagagctggttccttctggtgggttcgtggtcttgctgacttcaagaatgga
gccgcggaccttcgcggcacacggtgcaagctgtcggtggatctaccattccagggtctg
caggatggtggccctcttctcacagctccactaggcagtgccccagtggggacactgtgt
gggtgctctgaccccatatttcccttccacactctcctagcagaggttctccatcagggc
ttcacccctgcagcagatttctacctggacagccaggcctttccatacatcctttga

>gi568815594r:174391959_174622451|GENSCAN_predicted_peptide_9|101_aa
MGRSQHKKAENSKRQNAFSLPQDNNSLPAREQSWKKNEFDELTELGFRRWVITNSSELKE
QVLTQCKEAKNLEKTLDELLARITSVEKNINDLTELKNFTS

>gi568815594r:174391959_174622451|GENSCAN_predicted_CDS_9|306_bp
atggggagaagccagcacaaaaaggctgaaaattccaaaagacagaatgccttttctctt
ccacaggataacaactccttgccagcaagggaacaaagctggaagaaaaatgagtttgat
gaattgacagaactcggcttcagaaggtgggtaataacaaactcctccgagctaaaggaa
caggttctaacccaatgcaaggaagctaagaaccttgaaaaaacgttagatgaactgcta
gctagaataaccagtgtagagaagaacataaatgacctgacggagctgaaaaacttcact
tcatga