GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:20:23

Sequence gi568815594r:174137415_174363092 : 225678 bp : 35.98% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   6021   6151  131  1  2  107   47    76 0.392   2.76
 1.02 PlyA +   7624   7629    6                               1.05

 2.00 Prom +  13636  13675   40                              -4.15
 2.01 Init +  25606  25687   82  0  1   85   97    70 0.820   6.83
 2.02 Intr +  36228  36354  127  1  1   52   33   110 0.552   0.72
 2.03 Intr +  39829  40049  221  1  2  103  101    81 0.917   7.92
 2.04 Term +  41768  41874  107  0  2   67   43    81 0.754  -0.91
 2.05 PlyA +  42233  42238    6                               1.05

 3.00 Prom +  49154  49193   40                              -2.35
 3.01 Init +  51142  51246  105  0  0   72   67    54 0.479   1.97
 3.02 Intr +  52466  52547   82  1  1   78  100    32 0.741   1.69
 3.03 Term +  52738  52901  164  2  2   30   43   132 0.586   0.02
 3.04 PlyA +  53510  53515    6                               1.05

 4.04 PlyA -  53863  53858    6                               1.05
 4.03 Term -  67083  66950  134  1  2   73   47   110 0.585   2.67
 4.02 Intr -  74335  74217  119  0  2   21   26   141 0.247   0.39
 4.01 Init -  76611  76319  293  0  2   59   99   292 0.968  24.07
 4.00 Prom -  94793  94754   40                              -5.85

 5.12 PlyA -  94830  94825    6                               1.05
 5.11 Term - 100185  99998  188  1  2  125   42    49 0.935   0.67
 5.10 Intr - 101776 101580  197  0  2   91   99    80 0.964   7.54
 5.09 Intr - 103804 103686  119  1  2   72   93    70 0.939   4.24
 5.08 Intr - 118772 118641  132  2  0   21   23   140 0.481   0.72
 5.07 Intr - 122411 122285  127  1  1   90   88     4 0.823   0.36
 5.06 Intr - 125686 125350  337  2  1   93  110   195 0.755  15.85
 5.05 Intr - 137100 137057   44  2  2   72   91    42 0.052  -0.13
 5.04 Intr - 146202 146124   79  1  1   45   42   136 0.174   2.39
 5.03 Intr - 146487 146366  122  2  2   74   41   156 0.565   8.72
 5.02 Intr - 149798 149588  211  0  1   46   61   146 0.969   4.75
 5.01 Init - 151624 151501  124  1  1   38   71   114 0.454   5.08
 5.00 Prom - 152165 152126   40                              -8.05

 6.00 Prom + 153939 153978   40                              -8.85
 6.01 Init + 155697 155803  107  2  2   30  109   102 0.469   4.28
 6.02 Intr + 164625 164772  148  0  1   98   63   105 0.997   8.32
 6.03 Intr + 166289 166435  147  1  0   75   86    68 0.963   4.81
 6.04 Intr + 166833 166955  123  2  0   71   91    65 0.957   4.96
 6.05 Intr + 171275 171445  171  1  0   63   92   187 0.988  15.82
 6.06 Intr + 172436 172642  207  1  0   97   63   117 0.988   8.45
 6.07 Intr + 173369 173444   76  1  1   62   99    71 0.887   3.77
 6.08 Intr + 178752 178876  125  1  2   47   94    45 0.228   0.38
 6.09 Term + 183069 183152   84  2  0   76   43    75 0.305  -1.53
 6.10 PlyA + 185544 185549    6                               1.05

 7.03 PlyA - 185922 185917    6                               1.05
 7.02 Term - 187153 187036  118  0  1   32   37   108 0.330  -2.87
 7.01 Init - 194432 194209  224  2  2   55  121    89 0.549   6.98
 7.00 Prom - 195635 195596   40                              -2.55

 8.02 PlyA - 195978 195973    6                               1.05
 8.01 Sngl - 210042 209227  816  0  0   58   42   375 0.943  25.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:174137415_174363092|GENSCAN_predicted_peptide_1|43_aa
XKKFISVEPTQKSPVPNHIIAHSVLTPLSDRPHLPFFICRREY

>gi568815594r:174137415_174363092|GENSCAN_predicted_CDS_1|132_bp
ngtaaaaaatttatatctgtagaaccaactcagaagagtcctgtgccaaaccacataatt
gctcactcagtcctcacacctctatcggataggccccacttacccttcttcatctgtcgg
cgagaatactga

>gi568815594r:174137415_174363092|GENSCAN_predicted_peptide_2|178_aa
MAILLSIYVVLLSMVAHACSPSDLRGQAYLVLELIYYADQETTGEGLESTLITLKMAKSY
YRKKIGQQPHFPIPIQLYLKGPRSILTKQPPADLIHRITSNWHKCVCSPADSDTCQHLDT
SGAPDGKSTFHQAKHTFKKHKNHEGDREGLGFQKGIFQTADNSQAKETADITTLHSKT

>gi568815594r:174137415_174363092|GENSCAN_predicted_CDS_2|537_bp
atggctattctactgtcaatctatgtagttctgcttagcatggttgcacatgcttgtagc
cccagcgacttgagaggccaagcatatttggttcttgagcttatttattatgctgatcaa
gagacaaccggagaaggtttagagagcacattgattacattgaaaatggccaagagttac
tacaggaagaaaataggccaacagcctcacttccccatccccatccaactgtatttaaaa
ggtcctaggagtattctaactaagcagccaccagctgacctcatccacagaataacttcc
aactggcataaatgtgtttgttcacctgctgactcagacacctgccaacacttagacaca
tctggggcacctgatggcaaaagcacttttcaccaagcaaaacacaccttcaaaaaacac
aaaaatcatgagggtgacagagagggtctaggattccagaaaggtatattccaaactgct
gataactcacaagccaaagaaacagctgacattactacccttcatagtaaaacatag

>gi568815594r:174137415_174363092|GENSCAN_predicted_peptide_3|116_aa
MRPTCGLNLNHATQSPGLNQINKAPKPSWPSLESQEEETLTQTQHRGTPCEDMERRQPSP
CQVSGGGCVAMSGLLMGPVSSGGQLGGGGSIISLNPVSIIREQSLTVAIYTSDPIV

>gi568815594r:174137415_174363092|GENSCAN_predicted_CDS_3|351_bp
atgaggccaacctgcggtcttaacctcaaccatgctacccagagtccaggactcaaccaa
ataaacaaagcccctaaaccatcatggccttccctagaaagtcaggaagaggaaactttg
actcagacacaacacagaggaacaccatgtgaagacatggagagaagacagccatcacca
tgccaagtctctggtggtggatgtgttgccatgtctgggttgttgatgggtccagtgagc
tctggcggtcaactgggtggtggaggctctatcatcagtttgaatccagtcagtatcatc
agagaacagtctctaactgtagccatctataccagtgacccaatagtgtga

>gi568815594r:174137415_174363092|GENSCAN_predicted_peptide_4|181_aa
MHVQTPKRPGKRGGSAKSIPRREETNARERFFYTHYGSCTWLPSVTGARGCEDGDREPRR
GPREPNTGVPMVLRCGSPMSSPGASESALVVLWDLPFRKVRLFLCLDRARSGRHRVSAID
CPATCGAESVVVVTSLRDKIDASGRPALMSALGWPQREKEAQVANSGVSDDRGASFTATL
S

>gi568815594r:174137415_174363092|GENSCAN_predicted_CDS_4|546_bp
atgcatgttcagactcccaagagacccggaaaacgcggaggatctgccaaaagcattcca
agaagagaagaaaccaacgccagggagagattcttttatacacattatggcagctgcaca
tggcttccgtcagtaactggggccagggggtgtgaggacggtgaccgggagccaaggaga
gggccacgggaaccgaacaccggagtccctatggtgttgcgctgtgggagtccaatgtct
agtcctggagcctccgagagcgcgctggtggtcctttgggaccttccctttcggaaagta
cggctgttcctgtgtcttgaccgtgccagatccggtagacaccgtgtgagcgctattgac
tgtccagcgacttgcggagctgagagcgtagtggtggtcacttccctgagagacaagatt
gatgcatctggaaggccagcactgatgtctgctctggggtggccacagagggaaaaggaa
gcacaagttgccaactctggggtgtctgatgaccgtggggcctcattcacagctactctc
tcctga

>gi568815594r:174137415_174363092|GENSCAN_predicted_peptide_5|559_aa
MKDKTHMGICTDAEKALDKIRYSFVIKTPNKLGMEEPYSKLALFQNELGYYLGSHNDLYP
NGLEIEGIHRFPLLMLILHFNKPPPLSVKMFCTVIGPKLLLVSQLSTSKKKRIPRCRFHT
AFKTPVKSDSAESLLNGQSTSNLQLRSFSDLDAGGTLSSEGRSAVSGILIAVTSTGVDKS
QINEIQDQDYDYSGLQMGQGLWRVVRNQQLQQEGYSEQGYLTREQSRRMAASNISNTNHR
KQVQGGIDIYHLLKARKSKEQEGFINLEMLPPELSFTILSYLNATDLCLASCVWQDLAND
ELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQLDEGSLTFNANPDEQTSLKYYKNKNT
YSHREQDSPKDTVHVTDMGNQAPQQLLAVAHGGVNYFMSKGILDDSPKEIAKFIFCTRTL
NWKKLRIYLDERRDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSH
RFCACNPDLMRELGLSPDAVYVLCYSLILLSIDLTSPHVKNKMSKREFIRNTRRAAQNIS
EDFVGHLYDNIYLIGHVAA

>gi568815594r:174137415_174363092|GENSCAN_predicted_CDS_5|1680_bp
atgaaggataaaactcacatgggcatctgcacagatgcagaaaaagcacttgacaaaatt
cgatactcttttgtgataaaaactcccaataaactaggtatggaagaaccttatagcaaa
ttagctctatttcagaatgagctgggttactacctggggtcccataacgacctatatccc
aatggcctagaaatagaaggaatacaccgattccccctcttgatgctgattcttcacttt
aataagccaccaccattgtcagtcaagatgttttgcactgtcatcggtcccaaactcctg
ctggttagccagctgtctacttccaagaagaaaaggattcctcgctgccgattccacacc
gcgttcaagactcctgtgaagagcgactccgctgagagcctcctcaatggccagtccact
tctaacttgcagctgagaagtttttctgatcttgatgctggaggtaccctgagttctgag
ggtcgtagtgctgtttctggtattctcatcgcggtcacctctaccggtgtggacaaatcc
caaattaatgaaattcaggaccaggattatgactactcaggcttgcagatgggtcaaggg
ttgtggagagtggtcagaaaccagcagctgcaacaagaaggctacagtgagcaaggctac
ctcaccagagagcagagcaggagaatggctgcgagcaacatttctaacaccaatcatcgt
aaacaagtccaaggaggcattgacatatatcatcttttgaaggcaaggaaatcgaaagaa
caggaaggattcattaatttggaaatgttgcctcctgagctaagctttaccatcttgtcc
tacctgaatgcaactgacctttgcttggcttcatgtgtttggcaggaccttgcgaatgat
gaacttctctggcaagggttgtgcaaatccacttggggtcactgttccatatacaataag
aacccacctttaggattttcttttagaaaattgtatatgcagctggatgaaggcagcctc
acctttaatgccaacccagatgagcaaacatcattaaaatattataaaaataagaatact
tacagccacagggaacaagattctccaaaggacaccgttcatgtcacggatatgggtaac
caagctccacagcagctgctggcagtggctcatgggggagtgaactactttatgtccaag
ggtatcctggatgattcgccaaaggaaatagcaaagtttatcttctgtacaagaacacta
aattggaaaaaactgagaatctatcttgatgaaaggagagatgtcttggatgaccttgta
acattgcataattttagaaatcagttcttgccaaatgcactgagagaattttttcgtcat
atccatgcccctgaagagcgtggagagtatcttgaaactcttataacaaagttctcacat
agattctgtgcttgcaaccctgatttaatgcgagaacttggccttagtcctgatgctgtc
tatgtactgtgctactctttgattctactttccattgacctcactagccctcatgtgaag
aataaaatgtcaaaaagggaatttattcgaaatacccgtcgcgctgctcaaaatattagt
gaagattttgtagggcatctttatgacaatatctaccttattggccatgtggctgcataa

>gi568815594r:174137415_174363092|GENSCAN_predicted_peptide_6|395_aa
MFKIRSAVVGLLLGLGWVWFLLGSQTNKSSCETLDSLIKGDPAASLPIISYSFTSYSPYV
TELIMESNVELIAKNDLRFIDAVYKLLRDQFNYKPILTKKQFIQCGFAEWKIQIVCDILN
CVMKKHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVV
IRHLYNEDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEI
TALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEMLLSK
KNDEFIEFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSDSTPRASTVNY
CGLNEISESPGLSPFFETEGIKLISVEGSDVYLKS

>gi568815594r:174137415_174363092|GENSCAN_predicted_CDS_6|1188_bp
atgttcaaaatcaggtctgcggttgtgggcctgttactggggcttgggtgggtgtggttc
cttctgggttcccagacaaacaagtcttcctgtgagaccttggacagtttgataaaggga
gacccagcagcatctttgcccatcatcagctattcttttacctcatactcaccttatgta
acagaacttataatggaatccaatgtagagctcatagcaaaaaatgacttgcgctttata
gatgctgtctataagcttcttcgtgatcaatttaattataaaccaattttgacaaaaaag
cagtttatccaatgtgggtttgcagaatggaaaatccaaattgtttgtgatattttgaat
tgtgtgatgaaaaagcacaaggaattaagcagtcttcagaagattccatcacaacaaaga
aagaaaatcagttctggtaagtcagaacctcctttgggcaatgagaaaatatctgcagag
gctgttggcgttgatatcagtggcaggtttatgacctcaggaaagaagaaagctgtggtg
attcgtcacttgtataatgaagataatgttgacatttctgaggatacattaagtccaata
acagatgttaatgaagcagttgatgtgtctgacttaaatgctactgaaataaagatgcct
gaagtaaaggttcctgaaatcaaggctgagcaacaggatgtaaatgttaatcctgagatt
actgcactacaaactatgcttgctgaatgccaagaaaatcttaagaaactgacttcgata
gagaaaaggttagactgtttggaacaaaaaatgaaaggaaaagtgatggtagatgaaaac
acctggactaatcttcttagtcgtgtcactcttcttgaaacagaaatgcttttgtctaaa
aagaatgatgaatttatagagtttaatgaagttagtgaagactacgcttcttgtagtgac
atggaccttctgaatcctcacagaaaaagcgaagtagagaggccagcaagtattcctctg
tcctctggctatagtacagcatcatcagattcaactcccagagcctctactgttaattac
tgtggtttgaatgagatttcagagtccccaggtttgtctcctttctttgaaactgaaggc
atcaaactgatcagcgtggaaggaagtgatgtttatcttaagtcctaa

>gi568815594r:174137415_174363092|GENSCAN_predicted_peptide_7|113_aa
MKNMSEGLSADILRNFWKIEIRQTTKCYPCSRKEKVISFDMPIKRAGAEEEAGFQAEFWT
SWMSFTETSEYSRKRRLTKSSVGMDAEQLKLSYIASGKSKWASQFGKEFGSFS

>gi568815594r:174137415_174363092|GENSCAN_predicted_CDS_7|342_bp
atgaaaaatatgagtgaggggctatcagcagacattttgagaaatttctggaaaatagaa
attagacaaacaactaagtgttacccatgtagcaggaaggaaaaagtcatcagttttgat
atgcccattaaaagagctggagctgaggaggaagctggtttccaggcagaattctggact
tcgtggatgagcttcactgaaacatcagagtacagcaggaaaagaagactgacaaaatca
agtgttggtatggatgctgagcaactgaaactctcatacattgctagtgggaaaagcaaa
tgggccagccagtttggaaaagagtttggcagtttttcataa

>gi568815594r:174137415_174363092|GENSCAN_predicted_peptide_8|271_aa
MELKNTARELHEAYTSINSRINQVEERVSGIEDQLNKIKHEDKIREKKNERKEQSLQEIL
DYMKRPNLRLIGVPESDEENGTKLENTLQDIIQENFPNLVRQANIQFPEIQRTQLRYSSR
RGTPRHIIIRFTKVEMKEQMLRAAIEKGQVTHKGKPIRLIADLSGETLQARREWGPIFNI
FKEKNFQPRISYSAQLSFISEGEIKPFTDKQMLRDFCYHQACLIRAPEGSTKYGKEKLVP
ATPKHIPKYKEKQHYGETASTNEQNNKLASK

>gi568815594r:174137415_174363092|GENSCAN_predicted_CDS_8|816_bp
atggagctgaaaaacacagcacgtgaacttcatgaagcatacacaagtatcaatagccga
atcaatcaagtggaagaaagggtatcagggattgaagatcaacttaataaaataaagcat
gaagacaagattagagaaaaaaagaatgaaaggaaggaacaaagcctccaagaaatattg
gactatatgaaaagaccaaacctacgattgattggtgtacctgaaagtgatgaggagaat
ggaaccaagttggaaaacacacttcaggatattatccaggagaacttccccaacctagta
agacaggccaacatccaatttccggaaatacagagaacacaactaagatactcctcaaga
agaggaaccccaagacacataatcatcagattcaccaaggttgaaatgaaggaacaaatg
ttaagggcagccatagagaaaggtcaggttacccacaaagggaagcccatcagactaata
gcggatctctctggagaaaccctacaagccagaagagagtgggggccaatattcaacatt
tttaaagaaaagaattttcaacccagaatttcatattcagcccaactaagcttcataagt
gaaggagaaataaaaccctttacagacaagcaaatgctgagggatttttgttaccaccag
gcctgccttataagagctcctgaaggaagcactaaatatggaaaggaaaaactggtacca
gccactccaaaacacataccaaaatataaagaaaaacaacactatggagaaactgcatca
actaatgagcaaaataacaagctagcatcaaaataa