GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:46:38

Sequence gi568815594f:138915982_139145471 : 229490 bp : 41.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    585    704  120  2  0  111   90    65 0.884   9.24
 1.02 Intr +   9186   9288  103  2  1  103   80    46 0.638   4.13
 1.03 Intr +  12173  12402  230  0  2   71  115    66 0.385   4.27
 1.04 Intr +  12522  12728  207  2  0   97   19   156 0.895   7.95
 1.05 Term +  23747  23884  138  1  0   80   53    91 0.011   1.78
 1.06 PlyA +  25091  25096    6                               1.05

 2.03 PlyA -  25270  25265    6                               1.05
 2.02 Term -  28497  28360  138  0  0   29   47   160 0.872   2.98
 2.01 Init -  28620  28534   87  0  0   93   72    44 0.763   3.99
 2.00 Prom -  60398  60359   40                              -2.55

 3.00 Prom +  71894  71933   40                              -3.75
 3.01 Init +  76502  76562   61  1  1   74   34   127 0.018   7.36
 3.02 Intr +  80331  80391   61  1  1   50   87    56 0.002  -1.43
 3.03 Intr +  83626  83789  164  1  2    7   74   147 0.009   3.90
 3.04 Term +  97804  97910  107  2  2   69   47   105 0.039   2.09
 3.05 PlyA +  98099  98104    6                               1.05

 4.00 Prom +  98197  98236   40                              -6.95
 4.01 Init + 100001 100190  190  1  1   59  109   155 0.002  11.92
 4.02 Intr + 127093 127362  270  2  0   79   91   239 0.764  19.89
 4.03 Term + 128658 129493  836  1  2   80   36   638 0.998  49.96
 4.04 PlyA + 130168 130173    6                               1.05

 5.08 PlyA - 130293 130288    6                               1.05
 5.07 Term - 143626 143002  625  0  1   89   38   524 0.979  40.37
 5.06 Intr - 144693 144343  351  2  0  115  115   348 0.999  33.71
 5.05 Intr - 146076 145884  193  1  1   82   83    78 0.924   4.33
 5.04 Intr - 151789 151703   87  2  0   61   86    51 0.669   1.22
 5.03 Intr - 156058 155885  174  2  0   76   75   164 0.884  12.89
 5.02 Intr - 157586 157473  114  0  0   69   84    99 0.967   7.10
 5.01 Init - 161076 161007   70  0  1   55   59   100 0.927   5.06
 5.00 Prom - 166070 166031   40                              -6.25

 6.00 Prom + 166529 166568   40                              -8.55
 6.01 Init + 167626 168253  628  0  1   45   58   433 0.957  31.55
 6.02 Term + 172622 172677   56  0  2  120   42    60 0.466   1.34
 6.03 PlyA + 173175 173180    6                               1.05

 7.04 PlyA - 173241 173236    6                               1.05
 7.03 Term - 199331 198949  383  0  2   35   55   557 0.482  41.12
 7.02 Intr - 209348 209183  166  2  1   70   74   261 0.997  21.51
 7.01 Init - 221720 221649   72  2  0   60   50    83 0.387   2.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  80107  79931  177  2  0   73  115    45 0.825   4.67
S.002 Sngl - 100127  99630  498  2  0   69   44   291 0.981  16.59


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:138915982_139145471|GENSCAN_predicted_peptide_1|265_aa
MASCFFKASKGEKEAPTRWALWVTPSLQLQAATIRPVETKGSIKDTGNGKSSSVCDECQL
LLHLLSSSAKALGIAHLHPGEVNSFIAHTNPAWWSFHTDVHEIWCRDSDRGTSLGRSILC
PPVLCLVRKIHLRPQVLRPTSPRNISPILNQRQRRQVLSVDPKLRCRSRTREGSLPLVFN
HCRDASLIIHPGFRGVRPRRDTCLGPSPLAASPAFLGKGQNPPREHEAKRKCWCTVTYEN
QNKASQNTVKVMAEPRHPLLTSISE

>gi568815594f:138915982_139145471|GENSCAN_predicted_CDS_1|798_bp
atggcctcttgcttcttcaaagctagcaagggagaaaaagaggctcccacaagatgggcg
ctctgggtgaccccatccctacagctccaggcagccaccatccggcctgttgaaaccaag
ggatctattaaggacacaggaaatggaaagagcagctcagtgtgtgatgaatgtcagtta
ctattacatttattaagctcttctgcaaaggccttgggtatagcccacctgcacccaggt
gaagtaaacagctttattgctcacacaaatcctgcttggtggtcttttcacacagacgtg
catgaaatttggtgccgtgactcggatcgggggacctcccttgggagatcaatcctctgt
cctcctgttctttgcttggtgagaaagatccacctacgacctcaggtcctcagaccaacc
agcccaagaaacatctcaccaattttaaatcagagacaaaggagacaggttttatctgtg
gacccaaaactccggtgccggtcacggactagggaaggcagccttcccttggtgtttaat
cattgcagggacgcctctctgattattcacccaggtttcagaggtgtcagaccacgcagg
gacacctgccttggtccttcacccttagcggcaagtcccgcttttctggggaaggggcaa
aacccaccaagggagcatgaagccaagcggaaatgctggtgtacagtcacctatgagaac
caaaataaggccagccagaacactgtcaaggtcatggcagagcccaggcatcccttgtta
acatccatctctgagtga

>gi568815594f:138915982_139145471|GENSCAN_predicted_peptide_2|74_aa
MEDWGGGSLNTESSLEGYACGSGPPVMVTEHLWGIPENIHEEEARERTGLPVTQALSTES
IKTQARYSNVEHLY

>gi568815594f:138915982_139145471|GENSCAN_predicted_CDS_2|225_bp
atggaggattggggtggtggatctctcaatacggagtcttctcttgagggttatgcatgc
ggttctggaccaccagtcatggtgacagaacacctctgggggattccagaaaatatacat
gaggaggaagccagggaaaggactggacttcctgttactcaagcactgagtactgagagc
atcaagactcaggctcgttattcaaatgtggagcacttatactag

>gi568815594f:138915982_139145471|GENSCAN_predicted_peptide_3|130_aa
MKEKKKRKKREEEEEEGGGGGTTASGSFSPVVLDKLLPRKLRQQNTPKKAEGLRAYLTEK
TVASRASQSAKPGVRVVSSLQVSPAGRRPSGTLENSQDEVEVPLSGYNPNPPKGTIVFSS
PPCKTKNVTT

>gi568815594f:138915982_139145471|GENSCAN_predicted_CDS_3|393_bp
atgaaggagaagaagaagaggaagaagagggaggaggaggaggaagaaggaggaggagga
ggcactacagccagcggtagcttctccccagttgttctagacaagctccttccaaggaag
ctgagacagcaaaacactcctaagaaggctgaagggctgagagcctaccttacagagaaa
acagtggctagcagagcttcacaaagcgccaaaccaggagttcgggtcgtgtcgtctttg
caggtgtcgccagctggaagaagacctagtggcactcttgaaaactcacaggatgaagtt
gaagttcctttatctggctacaatccgaacccaccaaaaggaacaattgttttttcttcc
cctccttgtaagaccaaaaatgtaaccacctga

>gi568815594f:138915982_139145471|GENSCAN_predicted_peptide_4|431_aa
MFHSPRRLCSALLQRDAPGLRRLPAPGLRRPLSPPAAVPRPASPRLLAAASAASGAARSC
SRTVCSMGTGTSRLYSALAKTLNSSAASQHPEYLVSPDPEHLEPIDPKELLEECRAVLHT
RPPRFQRDFVDLRTDCPSTHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLIL
EEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFF
LQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLKARTGWERFRSAQ
GCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPP
YTTWKIRTSGECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCD
FSFTEESDGLS

>gi568815594f:138915982_139145471|GENSCAN_predicted_CDS_4|1296_bp
atgtttcatagtccgcggcggctctgctcggccctgctgcagagggacgcgcccggcctg
cgccgcctgcccgccccagggctgcgccgcccgttgtccccgccggctgctgttcccagg
cccgcatccccccggctgctggcggcggcctcggcggcctcgggcgccgcgaggtcgtgt
tcccgaacagtgtgttccatgggaaccggtacaagcagactctatagtgctctcgccaag
acactgaacagcagcgctgcctcccagcacccagagtatttggtgtcacctgacccagag
catctggagcccattgatcctaaagagcttcttgaggaatgcagggccgtcctgcacacc
cgacctccccggttccagagggattttgtggatctgaggacagattgccctagtacccac
ccacctatcagggttatgcaatggaacatcctcgcccaagctcttggagaaggcaaagac
aactttgtacagtgccctgttgaagcactcaaatgggaagaaaggaaatgtctcatcctg
gaagaaatcctggcctaccagcctgatatattgtgcctccaagaggtggaccactatttt
gacaccttccagccactcctcagtagactaggctatcaaggcacgtttttccccaaaccc
tggtcaccttgtctagatgtagaacacaacaatggaccagatggttgtgccttatttttt
cttcaaaaccgattcaagctagtcaacagtgccaatattaggctgacagccatgacattg
aaaaccaaccaggtggccattgcacagaccctggagtgcaaggagtcaggccgacagttc
tgcatcgctgttacccatctaaaagcacgcactggctgggagcggtttcgatcagctcaa
ggctgtgacctccttcagaacctgcaaaacatcacccaaggagccaagattccccttatt
gtgtgtggggacttcaatgcagagccaacagaagaggtctacaaacactttgcttcctcc
agcctcaacctgaacagcgcctacaagctgctgagtgctgatgggcagtcagaaccccca
tacactacctggaagatccggacctcaggggagtgcaggcacaccctggattacatctgg
tattctaaacatgctctaaatgtaaggtcagctctcgatctgctcactgaagaacagatt
ggacccaacaggttaccttccttcaattatccttcagaccacctgtctctagtgtgtgac
ttcagctttactgaggaatctgatggactttcataa

>gi568815594f:138915982_139145471|GENSCAN_predicted_peptide_5|537_aa
MVNVSNDLSVVRRVLDLLADNFIVEASVHSSNAHCTDKTIEAAEALLHMESPTCLRDSRS
PVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDTSPIPTSPDSHEPMKKKKV
GRKPKTQQSPISNGSPELGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKG
IFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKDMPKNI
VVIDDDKSETCNEDLAGTTDEKSLERVSLSAESLLKAASSVRSGKNSSPINCSRAEKGVA
RVVNITSPGHDASSRSPTTTASVSATAAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNAG
APLITSTSPTTATSPKVVIQTIPTVMPASTENGDKITMQPAKIITIPATQLAQCQLQTKS
NLTGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSMPTQQASGQTPPRVISAVIKGPEVK
SEAVAKKQEHDVKTLQLVEEKPADGNKTVTHVVVVSAPSAIALPVTMKTEGLVTCEK

>gi568815594f:138915982_139145471|GENSCAN_predicted_CDS_5|1614_bp
atggtaaatgtcagcaacgatttgtcagttgtacgtagagtattagatcttctggctgat
aacttcatagtggaagcatcagttcacagcagtaatgcacactgtacagataagacaatt
gaagctgctgaagccctgcttcatatggaatctcctacctgcttgagggattcaagaagt
cctgtggaagtgtttgttcctccttgtgtatcaactccagaattcatccatgctgctatg
aggccagatgtcattacagaaactgtagtggaggtgtcaactgaagagtctgaacccatg
gatacctctcctattccaacatcaccagatagccatgaaccaatgaaaaagaaaaaagtt
ggccgtaaaccaaagacccagcaatcaccaatttccaatgggtctcctgagttaggtata
aagaagaaaccaagagaaggaaaaggaaacacaacctatttgtgggagtttcttttagat
ctacttcaagataaaaatacttgtcccaggtatattaaatggactcagagagaaaaaggc
atattcaagctggtggattcaaaggctgtctctaagctttggggaaagcataagaacaaa
ccagacatgaactatgaaaccatgggacgagctttgagatactactaccaaaggggaatt
cttgcaaaggttgaaggacagaggcttgtatatcagttcaaggatatgccgaaaaacata
gtggtcatagatgatgacaaaagtgaaacctgtaatgaagatttagcaggaactactgat
gaaaaatcattagaacgagtgtcactgtctgcagaaagtctcctgaaagcagcatcctct
gttcgcagtggaaaaaattcatcccctataaactgctccagagcagagaagggtgtagct
agagttgtgaatatcacttcccctgggcacgatgcttcatccaggtctcctactaccact
gcatctgtgtcagcaacagcagctccaaggacagttcgtgtggcaatgcaggtacctgtt
gtaatgacatcattgggtcagaaaatttcaactgtggcagttcagtcagttaatgcaggt
gcaccattaataaccagcactagtccaacaacagcgacctctccaaaggtagtcattcag
acaatccctactgtgatgccagcttctactgaaaatggagacaaaatcaccatgcagcct
gccaaaattattaccatcccagctacacagcttgcacagtgtcaactgcagacaaagtca
aatctgactggatcaggaagcattaacattgttggaaccccattggctgtgagagcactt
acccctgtttcaatagcccatggtacacctgtaatgagactatcaatgcctactcagcag
gcatctggccagactcctcctcgagttatcagtgcagtcataaaggggccagaggttaaa
tcggaagcagtggcaaaaaagcaagaacatgatgtgaaaactttgcagctagtagaagaa
aaaccagcagatggaaataagacagtgacccacgtagtggttgtcagtgcgccttcagct
attgcccttcctgtaactatgaaaacagaaggactagtgacatgtgagaaataa

>gi568815594f:138915982_139145471|GENSCAN_predicted_peptide_6|227_aa
MRKSWNCGRSLKGEPSGGGERSPEKPAAPERGQQRPLRPDSVAGAAERQQPHSLPGSSAT
GVKRTTRPPPSAQLNRGSVLQHPLPALSPAAAAAARRTHPEATAPDSRQVTLQGDHFLIR
RLHYFIHSPLSPSRPSDCEVDTVPPAQTATGESPRLLCTPSPAAPMHGRKVPLSLPARMS
RSSWFVGPSCRDVAMFIPGLELLLHIDLHLVFTHFYTTVKCDCLPKV

>gi568815594f:138915982_139145471|GENSCAN_predicted_CDS_6|684_bp
atgcggaagtcatggaattgtggacgaagtctgaagggagaaccgagcgggggtggcgag
cgttcgccggagaagcccgccgcccccgaacgcgggcagcagcggcctctccggccagac
agcgtggcaggcgcagccgagagacaacagcctcactcacttcctggttcctcagcaact
ggggtgaagcgcacaactcgtccgcccccgagtgcccaacttaaccgcggctccgttctc
cagcacccgctgccagcgctcagcccggcagctgctgctgctgctcgccgaacccaccct
gaagcgacagcgccggattcgaggcaggttactctccaaggtgatcacttcctgattcgt
cgcctccattacttcattcactcccccctttcccccagccgccccagtgactgtgaggtg
gacactgtacccccagcacagactgctacaggggagtcaccccgccttctgtgcaccccc
tctcctgctgcaccgatgcacgggagaaaagttcccctgtccttaccggcccggatgagc
agatccagctggttcgtgggtccctcatgcagagacgtcgccatgtttatcccggggctg
gagctgctgcttcacattgacttacaccttgtcttcacccacttctacacaaccgttaaa
tgtgactgtttgcctaaagtatga

>gi568815594f:138915982_139145471|GENSCAN_predicted_peptide_7|206_aa
MTSAVVDSGGTILELSSNGVENQEESEKVSEYPAVIVEPVPSARLEQGYAAQVLVYDDET
YMMQDVAEEQEVETENVETVAAQDHASTFRAPPGTAGEGPGGADDEGPVRRQGKVTVKYD
RKELRKRLNLEEWILEQLTRLYDCQEEEIPELEIDVDELLDMESDDARAATVKELLVDCY
KPTEAFISGLLDKIRGMQKLSTPQKK

>gi568815594f:138915982_139145471|GENSCAN_predicted_CDS_7|621_bp
atgacatcagcagtggttgacagtggaggtactattttggagctttccagcaatggagta
gaaaatcaagaggaaagtgaaaaggtttctgaatatccagcagtgattgtggagccagtt
ccaagtgccagattagagcagggctatgcagcccaggttctggtttatgatgatgagact
tatatgatgcaagatgtggcagaagaacaagaagttgagaccgagaatgtggaaacagtg
gcggcccaggaccacgcgtctactttcagagccccccccgggaccgcaggagagggcccg
ggcggcgcggacgatgagggcccagtgaggcgccaagggaaggtcaccgtcaagtatgac
cgcaaggagctacggaagcgcctcaacctagaggagtggatcctggagcagctcacgcgc
ctctacgactgccaggaagaggagatcccagaactggagattgacgtggatgagctcctg
gacatggagagtgacgatgcccgggctgccacggtcaaggagctgctggttgactgttac
aaacccacagaggccttcatttctggtctgctggacaagatccggggcatgcagaagctg
agcacaccccagaagaagtga