GENSCAN 1.0	Date run:  6-Nov-116	Time: 02:19:23

Sequence gi568815594f:107795554_108010550 : 214997 bp : 39.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3171   3292  122  2  2   18  116    91 0.646   3.27
 1.02 Intr +   3476   3579  104  2  2   88   70    53 0.914   2.40
 1.03 Term +   4503   4753  251  1  2   56   49   147 0.493   2.48
 1.04 PlyA +  10641  10646    6                               1.05

 2.00 Prom +  11295  11334   40                              -2.45
 2.01 Init +  12275  12456  182  1  2   47   49   110 0.675   1.70
 2.02 Term +  13681  13819  139  1  1   88   50   121 0.433   4.75
 2.03 PlyA +  14039  14044    6                               1.05

 3.05 PlyA -  14243  14238    6                               1.05
 3.04 Term -  29248  29152   97  0  1   70   48   208 0.911  11.46
 3.03 Intr -  41879  41784   96  1  0  141   61    37 0.468   4.51
 3.02 Intr -  49790  49686  105  1  0  130   18    45 0.316   0.11
 3.01 Init -  52114  51219  896  1  2   36   53   217 0.594   6.84
 3.00 Prom -  56480  56441   40                              -4.55

 4.04 PlyA -  56905  56900    6                               1.05
 4.03 Term -  62612  62499  114  2  0   86   49   102 0.928   3.69
 4.02 Intr -  63168  63076   93  0  0    6   95   120 0.789   3.74
 4.01 Init -  67248  67228   21  0  0   85   92    14 0.605   1.29
 4.00 Prom -  68200  68161   40                              -3.25

 5.00 Prom +  84449  84488   40                              -5.45
 5.01 Init + 100001 100455  455  1  2   85  108   366 0.982  33.68
 5.02 Intr + 104022 104139  118  0  1  115   86    12 0.918   3.25
 5.03 Intr + 107680 107833  154  0  1   80  101   191 0.988  18.32
 5.04 Intr + 113012 113178  167  0  2   76  100    64 0.583   5.16
 5.05 Term + 115728 115841  114  2  0   63   42    96 0.521   0.09
 5.06 PlyA + 116823 116828    6                               1.05

 6.00 Prom + 134404 134443   40                              -2.95
 6.01 Init + 136091 136634  544  1  1   82   96   541 0.610  47.40
 6.02 Intr + 149417 150052  636  0  0  114   86   211 0.952  14.64
 6.03 Term + 151823 152019  197  0  2   56   49   239 0.898  13.39
 6.04 PlyA + 152118 152123    6                               1.05

 7.00 Prom + 154550 154589   40                              -5.55
 7.01 Sngl + 162288 162701  414  2  0   16   49   348 0.975  19.74
 7.02 PlyA + 163031 163036    6                               1.05

 8.00 Prom + 163567 163606   40                              -6.15
 8.01 Sngl + 163660 164310  651  0  0   49   45   293 0.797  17.02
 8.02 PlyA + 164371 164376    6                               1.05

 9.00 Prom + 191670 191709   40                              -2.95
 9.01 Init + 193966 194511  546  0  0   46   99   367 0.140  28.55
 9.02 Intr + 194726 194832  107  1  2   25   34   133 0.001  -0.31
 9.03 Intr + 200460 200616  157  0  1   52   89    75 0.001   3.09
 9.04 Intr + 214206 214334  129  2  0   74   86   171 0.941  15.47

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 201932 201844   89  2  2   81   89    67 0.874   6.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:107795554_108010550|GENSCAN_predicted_peptide_1|158_aa
GLEGRPGIEIHTLKRTHVPATEIEDTGMTVTPEHSLPTCGSLDREIFLQLRKDHKLVAFR
KDVTSRSLFGQHDVAVGRCDSESPQDFAEHYCGNALTSDFLASPLGTHSLRRAWVVGRTG
QRIVPAAVTPSLESGCPCPLADIAVFLSQGRKLQSCGQ

>gi568815594f:107795554_108010550|GENSCAN_predicted_CDS_1|477_bp
ggcttagagggaaggccgggcattgagatccacacgctgaagcggacacatgtcccagcc
acagaaatagaagacactggaatgactgtaacaccagaacacagcctacctacctgcgga
agtttggacagagaaattttcctacagctaagaaaagatcataaattggtagcctttagg
aaggatgtgaccagcagatccttgtttggacaacacgatgtggctgtgggacgttgtgat
tctgagagtccacaggattttgcagagcactactgtggaaatgctcttacttctgacttc
ctagcctcccctctgggcactcattccctccgaagggcttgggtggtgggaagaacaggg
cagaggattgtgccagcggcagtcactccctcactggagagcggttgcccctgtccctta
gcagatatcgctgtcttcctctcacagggcaggaaactgcagtcatgtggacagtag

>gi568815594f:107795554_108010550|GENSCAN_predicted_peptide_2|106_aa
MGLSRIVIKPEGTEGILESGGHREWNGMEGTKTGGWRCLQKLLLILTERWKGALGQGSDN
SLQLRQAQSQGSKDDHGLRWQEEPAEKHGFGVMKITEGSESQSQFS

>gi568815594f:107795554_108010550|GENSCAN_predicted_CDS_2|321_bp
atgggcttaagcaggatagtgataaaaccagaaggcacagaaggcatcttagagtctggt
ggccacagagagtggaatggaatggaggggaccaaaactggaggctggagatgccttcag
aagctgctgttgatcctaactgagagatggaagggggcacttgggcagggtagtgacaac
agccttcaactaagacaggcccagtcccagggaagcaaagatgatcacggactcagatgg
caagaagaacctgctgaaaaacatggatttggggtcatgaagataacagaaggaagtgaa
agtcagagccaattcagttga

>gi568815594f:107795554_108010550|GENSCAN_predicted_peptide_3|397_aa
MQRNTQTLVKNSFPLKFIWNQKTARIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYW
YQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSIFNKWCWENWLAISRKLKLD
PFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMAIKAKIDK
WDLIKLKSFCTAKETTIRVNRQPTKWEKIFAIYSSDKGLISRIYNELKQIYKKKTNKPIK
KWAKDMNRHFSKEDIYAAKRHMKKCSSSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRS
RAPLLLLQHMMITLSCFLLPVPNPDCSQSLGEGRLYILFTLLSLSQPLQLSVNLTSSDKP
FLTVLGDSPVGPVAAVPVPAAVALLAQSGARKTCATS

>gi568815594f:107795554_108010550|GENSCAN_predicted_CDS_3|1194_bp
atgcaacgcaacacccaaacattagtcaaaaacagctttcctttaaagttcatatggaac
caaaaaacagcccgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatc
acactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactgg
taccaaaacagagatatagatcaatggaacagaacagagccctcagaaataacgccgcat
atctacaactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattcc
atatttaataaatggtgctgggaaaactggctagccataagtagaaagctgaaactggat
cccttccttacaccttatacaaaaatcaattcgagatggattaaagacttaaatgttaga
cctaaaaccataaaaaccctagaagaaaacctaggcattaccattcaggacataggcatg
ggcaaggacttcatgtctaaaacaccaaaagcaatggcaataaaagccaaaattgacaaa
tgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaac
aggcaacctacaaaatgggagaaaattttcgcaatctactcatctgacaaagggctaata
tccagaatctacaatgagctcaaacaaatttacaagaaaaaaacaaacaagcccatcaaa
aagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaaaaga
cacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatg
agataccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacagatca
cgggctcctttactactcctgcaacatatgatgatcactctttcttgtttcctgcttcca
gtaccaaatccagactgttctcagagccttggagaaggaaggttgtacattctgttcact
ctgctgagtctttctcagcctttacaactcagtgtaaatctgacctcttctgacaaacct
ttcctgactgtcctaggtgactcacccgtcggcccggtggcagcagtgcccgttcctgct
gccgtggctctcctggcgcagagtggagctcgaaaaacctgcgcgacttcttaa

>gi568815594f:107795554_108010550|GENSCAN_predicted_peptide_4|75_aa
MKTTQAQSYDIYECLNQRREDSSSKAAGQLIDSQPSADEHTDKQEDQSMSLKKVSQSQGK
ADVVDVEQVVSGKPF

>gi568815594f:107795554_108010550|GENSCAN_predicted_CDS_4|228_bp
atgaagacaactcaggcacagagttacgacatttatgaatgtcttaaccagagaagggaa
gatagcagcagcaaagctgcaggacaactgatagacagccaaccttcagctgatgaacac
acagataaacaagaagaccagtcaatgtcactcaaaaaagtcagtcagagtcagggcaag
gctgatgtggtcgatgtagagcaagtggtgtcagggaagcctttctaa

>gi568815594f:107795554_108010550|GENSCAN_predicted_peptide_5|335_aa
MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKSLSSGLRKGTKKYPDYI
QIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHERVPPKELSPPLPDKFFDY
IDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFCFIIGTLYLYRCITMYVTTLP
VPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSHILCGDFLFSGHTVTLTLTYLFI
KEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTIDVIIAYYITTRLFWWYHSMANEKIH
RKHEMVSANEWPLSTHLDAVCPVNLDLVPQGSQLF

>gi568815594f:107795554_108010550|GENSCAN_predicted_CDS_5|1008_bp
atggatatcatagagacagcaaaacttgaagaacatttggaaaatcaacccagtgatcct
acgaacacttatgcaagacccgctgaacctgttgaagaagaaaacaaaaatggcaatggt
aaacccaagagcttatccagtgggctgcgaaaaggcaccaaaaagtacccggactatatc
caaattgctatgcccactgaatcaaggaacaaatttccactagagtggtggaaaacgggc
attgccttcatatatgcagttttcaacctcgtcttgacaaccgtcatgatcacagttgta
catgagagggtccctcccaaggagcttagccctccactcccagacaagttttttgattac
attgatagggtgaaatgggcattttctgtatcagaaataaatgggattatattagttgga
ttatggatcacccagtggctgtttctgagatacaagtcaatagtgggacgcagattctgt
tttattattggaactttatacctgtatcgctgcattacaatgtatgttactactctacct
gtgcctggaatgcatttccagtgtgctccaaagctcaatggagactctcaggcaaaagtt
caacggattctacgattgatttctggtggtggattgtccataactggatcacatatctta
tgtggagacttcctcttcagcggtcacacggttacgctgacactgacttatttgttcatc
aaagaatattcgcctcgtcacttctggtggtatcatttaatctgctggctgctgagtgct
gccgggatcatctgcattcttgtagcacacgaacactacactatcgatgtgatcattgct
tattatatcacaacacgactgttttggtggtaccattcaatggccaatgaaaagatacac
aggaaacatgagatggtttctgctaatgagtggcccttgagtacacacttagatgctgtc
tgccctgtaaatttggatctggtgccccagggcagtcaactcttctag

>gi568815594f:107795554_108010550|GENSCAN_predicted_peptide_6|458_aa
MSSPGPSQPPAEDPPWPARLLRAPLGLLRLDPSGGALLLCGLVALLGWSWLRRRRARGIP
PGPTPWPLVGNFGHVLLPPFLRRRSWLSSRTRAAGIDPSVIGPQVLLAHLARVYGSIFSF
FIGHYLVVVLSDFHSVREALVQQAEVFSDRPRVPLISIVTKEKGEREVVGCGYADAADES
PGVVFAHYGPVWRQQRKFSHSTLRHFGLGKLSLEPKIIEEFKYVKAEMQKHGEDPFCPFS
IISNAVSNIICSLCFGQRFDYTNSEFKKMLGFMSRGLEICLNSQVLLVNICPWLYYLPFG
PFKELRQIEKDITSFLKKIIKDHQESLDRENPQDFIDMYLLHMEEERKNNSNSSFDEEYL
FYIIGDLFIAGTDTTTNSLLWCLLYMSLNPDVQEKVHEEIERVIGANRAPSLTDKAQMPY
TEATIMEVQRLTVVVPLAIPHMTSENTGKSRVFLFECP

>gi568815594f:107795554_108010550|GENSCAN_predicted_CDS_6|1377_bp
atgtcgtctccggggccgtcgcagccgccggccgaggacccgccctggcccgcgcgcctc
ctgcgtgcgcctctggggctgctgcggctggaccccagcgggggcgcgctgctgctatgc
ggcctcgtagcgctgctgggctggagctggctgcggaggcgccgggcgcggggcatcccg
cccgggcccacgccctggcctctggtgggcaacttcggtcacgtgctgctgcctcccttc
ctccggcggcggagctggctgagcagcaggaccagggccgcagggattgatccctcggtc
ataggcccgcaggtgctcctggctcacctagcccgcgtgtacggcagcatcttcagcttc
tttatcggccactacctggtggtggtcctcagcgacttccacagcgtgcgcgaggcgctg
gtgcagcaggccgaggtcttcagcgaccgcccgcgggtgccgctcatctccatcgtgacc
aaggagaagggtgagcgggaggtcgtgggctgtgggtacgcggatgccgcggatgagtct
ccaggggttgtgtttgcacattatggtcccgtctggagacaacaaaggaagttctctcat
tcaactcttcgtcattttgggttgggaaaacttagcttggagcccaagattattgaggag
ttcaaatatgtgaaagcagaaatgcaaaagcacggagaagaccccttctgccctttctcc
atcatcagcaatgccgtctctaacatcatttgctccttgtgctttggccagcgctttgat
tacactaatagtgagttcaagaaaatgcttggttttatgtcacgaggcctagaaatctgt
ctgaacagtcaagtcctcctggtcaacatatgcccttggctttattaccttccctttgga
ccatttaaggaattaagacaaattgaaaaggatataaccagtttccttaaaaaaatcatc
aaagaccatcaagagtctctggatagagagaaccctcaggacttcatagacatgtacctt
ctccacatggaagaggagaggaaaaataatagtaacagcagttttgatgaagagtactta
ttttatatcattggggatctctttattgctgggactgataccacaactaactctttgctc
tggtgcctgctgtatatgtcgctgaaccccgatgtacaagaaaaggttcatgaagaaatt
gaaagagtcattggcgccaaccgagctccttccctcacagacaaggcccagatgccctac
acagaagccaccatcatggaagtgcagaggctaactgtggtggtgccgcttgccattcct
catatgacctcagagaacacaggcaagtccagggtcttcctctttgaatgcccttga

>gi568815594f:107795554_108010550|GENSCAN_predicted_peptide_7|137_aa
MIGNNKLLQAKGNVRTHCKEAKNLEKILHEWLTRINSVEKTLNDLMELKTMAQELRDACT
SFSSRFDQLEERVSVIEEQMNEMKREEKFREKSVKRNKQSLQEIWDEVKRPNLRLTGVPE
SDGENGTKLENTLQDII

>gi568815594f:107795554_108010550|GENSCAN_predicted_CDS_7|414_bp
atgattggtaataacaaacttctccaagctaaagggaatgttcgaacccattgcaaagaa
gctaaaaaccttgaaaaaatattacatgaatggctaactagaataaacagtgtagagaag
accttaaatgacctgatggagctaaaaaccatggcacaagaactacgtgacgcatgtaca
agcttcagtagccgattcgatcaactggaagaaagggtatcagtgattgaagagcaaatg
aatgaaatgaagcgagaagagaagtttagagaaaaaagtgtaaaaagaaacaaacaaagc
ctccaagaaatatgggacgaggtaaaaagaccaaatctacgtctgactggtgtacctgaa
agtgacggggagaatggaaccaagttggaaaacactctgcaggatattatctag

>gi568815594f:107795554_108010550|GENSCAN_predicted_peptide_8|216_aa
MGDFNTPLSTLDRSTRQEVNKDIQELNSALHQVDLIDIYRTLQPKSTEYTFFSVPHCTYS
KIDHVVGSKALLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNRSTTWKLNNLLLNDDWV
HNKMKAEIKMFLETNENKDTTYQNLWDTFKAVCKGKFIALNAHKRKQERSKLDTLTSQLK
ELAKQEQTHSKASRRQEITDQTRTEGDTGTKIPSKN

>gi568815594f:107795554_108010550|GENSCAN_predicted_CDS_8|651_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacaggaagttaac
aaggatatccaggaattgaactcagctctgcaccaagtggacctaatagacatctataga
actctccaacccaagtcaacagagtatacattcttctcagtaccacattgcacttattcc
aaaattgaccacgtagttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaacta
actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgacgactgggta
cataacaaaatgaaggcagaaataaagatgttccttgaaaccaatgagaacaaagacaca
acataccagaatctttgggacacatttaaagcagtgtgtaaagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatctaaacttgacaccctaacatcacaattaaaa
gaactagcgaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataacagat
cagaccagaactgaaggagatacaggcacaaaaatcccttcaaaaaattga

>gi568815594f:107795554_108010550|GENSCAN_predicted_peptide_9|313_aa
MHMSSKDSILQSQHHSLHRTRGQWLFRRRVCSRPHTRTPAARSRCSAGLKPALTRAPAAD
SCEPARVYPLNAGTLQPGPMGRAGLEAPPPPCGVTGTPGARGLQGRVGPRPQSLAFRGCP
PRASSLPGSPRCRRRCHTMAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGI
AQLPRLENSGCPQGPLKVPWRVAVNAFWKRAVQEKKELELAPPVAAVVLPATCTLKMGSQ
SVSPYQKRLCNFLVMGELFPLPSPLQFLDQVAAATGHTVVLVDQTEDILAKSKKGIEESL
RKVAKKKFAENLK

>gi568815594f:107795554_108010550|GENSCAN_predicted_CDS_9|939_bp
atgcacatgtcatcaaaggatagcattttacagagtcaacaccactcacttcatagaaca
aggggccagtggcttttcagaagaagggtctgttctcggccccacaccagaacgccagcc
gccaggtcccgctgctcagcaggtctcaagcccgcgctcactcgggctccggctgctgac
agctgcgagcccgcgcgtgtatacccgctcaacgctgggacgttacagccagggccaatg
ggcagagcgggactcgaggccccgcccccgccttgtggcgtcacggggacgccgggggcg
cgcgggctgcagggccgcgtaggtccccgcccccagagtctggctttccgcggctgcccg
cctcgcgcgtcttccctgcccgggtctcctcgctgtcgccgccgctgccacaccatggcc
ttcgtcaccaggcagttcatgcgttccgtgtcctcctcgtccaccgcctcggcctcggcc
aagaagataatcgtcaagcacgtgacggtcatcggcggcgggctgatgggcgccggcatt
gcccagcttcctcgtttggaaaattctggctgcccccagggcccgctgaaggttccatgg
agagtggcggtgaatgcattttggaagcgggccgtgcaagagaagaaagaattagagctt
gcccctcctgttgctgcagttgttcttccagccacatgtactctgaagatgggatcacaa
tcagtgtctccataccagaaaaggctctgtaactttttggtcatgggagagctctttcct
ctgccctctcctttgcagttcctagaccaggttgctgcagcaactggtcacacagtagtg
ttggtagaccagacagaggacatcctggcaaaatccaaaaagggaattgaggaaagcctt
aggaaagtggcaaagaagaagtttgcagaaaaccttaag