GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:20:53

Sequence gi568815594r:105582736_105800005 : 217270 bp : 36.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6513   6700  188  1  2   86   94   123 0.627  11.19
 1.02 Intr +  30649  30772  124  0  1  103   76   138 0.664  13.34
 1.03 Intr +  39115  39288  174  2  0  -68   81   195 0.030   2.19
 1.04 Intr +  48163  48310  148  2  1   61   78    77 0.068   2.37
 1.05 Intr +  62453  62652  200  2  2   55   63   125 0.093   4.77
 1.06 Intr +  63788  63937  150  0  0   61   53    81 0.648   1.11
 1.07 Intr +  65814  65947  134  1  2   99   91    51 0.981   5.94
 1.08 Intr +  72868  72987  120  0  0   81   78   112 0.930   9.27
 1.09 Intr +  76319  76630  312  1  0   90  119   266 0.614  25.36
 1.10 Intr +  83442  83585  144  2  0   51  105    98 0.974   7.36
 1.11 Intr +  84394  84592  199  0  1   73  100   246 0.999  22.30
 1.12 Intr +  84709  84968  260  2  2   82   98   322 0.984  28.86
 1.13 Term +  95017  95202  186  0  0   88   48   136 0.942   6.11
 1.14 PlyA +  96006  96011    6                               1.05

 2.03 PlyA -  96126  96121    6                               1.05
 2.02 Term -  96477  96287  191  1  2   43   49   217 0.945   9.93
 2.01 Init -  97284  97062  223  0  1   86   38   101 0.523   3.67
 2.00 Prom -  99087  99048   40                              -8.15

 3.11 PlyA -  99301  99296    6                               1.05
 3.10 Term - 100582  99998  585  1  0   83   35   546 0.999  42.32
 3.09 Intr - 104103 103957  147  0  0   64   75   148 0.992  10.61
 3.08 Intr - 109400 109241  160  1  1   39   58    61 0.747  -2.73
 3.07 Intr - 110751 110564  188  0  2   83   97   174 0.985  15.37
 3.06 Intr - 112933 112781  153  1  0   93   69   116 0.918   9.55
 3.05 Intr - 117279 117115  165  0  0   97   75   155 0.974  14.34
 3.04 Intr - 120288 120207   82  2  1   29  107    49 0.521  -0.38
 3.03 Intr - 125733 125605  129  2  0   95  -10   134 0.055   3.19
 3.02 Intr - 126202 125903  300  0  0   63  113   291 0.748  24.02
 3.01 Init - 128635 128628    8  1  2   74   53     0 0.521  -4.45
 3.00 Prom - 128985 128946   40                              -4.45

 4.00 Prom + 130315 130354   40                              -6.15
 4.01 Init + 134879 135304  426  1  0   45  100   121 0.877   5.35
 4.02 Intr + 136325 136792  468  1  0  103   87   288 0.996  22.57
 4.03 Term + 143844 144110  267  2  0  104   38    96 0.625   0.71
 4.04 PlyA + 146054 146059    6                               1.05

 5.02 PlyA - 146318 146313    6                               1.05
 5.01 Sngl - 148780 148253  528  1  0   33   38   210 0.451   6.31
 5.00 Prom - 150661 150622   40                              -6.15

 6.02 PlyA - 150829 150824    6                               1.05
 6.01 Sngl - 151733 151056  678  2  0   53   43   368 0.957  24.73
 6.00 Prom - 180601 180562   40                              -3.45

 7.03 PlyA - 182107 182102    6                               1.05
 7.02 Term - 190448 190006  443  0  2   65   42   108 0.086  -1.67
 7.01 Intr - 193005 192757  249  1  0   23   71   205 0.209   8.79

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  39144  39288  145  2  1   43   81   168 0.859  11.93
S.002 Init +  62475  62652  178  2  1   75   63   114 0.863   7.07
S.003 Term - 125733 125601  133  2  1   95   36   137 0.922   5.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:105582736_105800005|GENSCAN_predicted_peptide_1|779_aa
XKMTPQGECSVAETLTPEEEHHMKRMMAKREKIIKELIQTEKDYLNDLELCVREVVQPLR
NKKTDRLDVDSLFSNIESVHQISAKLLSLLEEATTDVEPAMQVIGQCGGLGDTQMQQLED
QNANVRSNRKAVRFGENDNGEMVFSGSRIHQSSQERKNQQEAGEVFLQIKGPLEDIYKIY
CYHHDEAHSILESYEKEEELKEHLSHCIQSLKGKPNLLDMGSLMIKPIQRVMKYPLLLCE
LRNSTPPSHPDYRALDDAFAAVKDINVNINELKRRKDLGENVLGITSLENNLTIPSKVED
AQTGDSENEFLSICPRETLAHVLKERCTVLKYKKNDEDESLKDKLSKLNIHSISKKSKRV
TNHLKILTRGESQDAMPLALQSVMDLQEISYNKDDEMDYSETLSNALNSCHDFASHLQRL
ILTPLSALLSLFPGPHKLIQKRYDKLLDCNSYLQRSTGEESDLAKKEYEALNAQLVEELQ
AFNQAARKILLNCLCSFITLLRDLMLVAQQAYSTLVPMPLLVSSISEIQNQVLEEIQNLN
CVKENSATFIERKLSFEKKKPVQILPEMPHQTDIHRSKLLSTYSAEELYQAKRKCNATQE
YDINLLEGDLVAVIEQKDPLGSTSRWLVDTGNVKGYVYSSFLKPYNPAKMQKVDAENRFC
DDDFENISLFVSSRPASDSVTGTSESSIGDSSSSLSGTCGKFETNGTDVDSFQEVDEQIF
YAVHAFQARSDHELSLQEYQRVHILRFCDLSGNKEWWLAEAQGQKGYVPANYLGKMTYA

>gi568815594r:105582736_105800005|GENSCAN_predicted_CDS_1|2340_bp
naaaagatgactccacagggtgagtgttctgtagctgagaccttaaccccagaggaagag
catcatatgaagaggatgatggcaaagcgggaaaagatcattaaggagctgatacagaca
gaaaaggattatctcaatgatctagagctgtgtgttagggaagtggttcagcccctgaga
aataaaaagactgataggctggatgtggatagcttgtttagcaacattgagtccgtgcat
cagatatcagccaagctgctgtcattgttggaagaggccacaacagacgtggaaccggcc
atgcaagtaattggtcagtgcggaggtttgggggacacccagatgcaacagttggaagat
cagaatgcaaatgttagaagtaataggaaagctgtccgctttggagaaaatgacaatggg
gaaatggtattttcaggatcaaggatacaccaatcctcacaagaaagaaaaaatcagcag
gaagcaggagaagtattcttgcagattaaagggccactggaagatatttataaaatctac
tgctatcaccatgatgaagcacatagtatactggagtcctatgaaaaggaagaagagctg
aaggaacatttgagccactgtatccagtccttaaaaggcaaaccaaacttattggacatg
ggctctttgatgatcaaaccaattcaacgtgtgatgaaataccccctattactgtgcgaa
cttcggaattccacccctccctctcacccagattacagagcactggacgatgcctttgct
gctgtgaaggacattaatgttaacatcaatgaacttaaaagaaggaaagatttaggtgag
aatgtacttggaatcactagtttagagaacaacttgacaatacctagcaaagttgaagat
gcacagaccggagactcagaaaatgaatttctaagtatttgcccaagagagactcttgcc
catgtgctcaaagagaggtgtactgttctaaaatacaagaagaatgacgaggatgaatca
cttaaagacaaattgtctaaactaaatattcattcaattagcaagaaatcaaaaagagtg
acaaatcatctgaagattctgaccagaggagaatcacaggatgccatgcccctggctctg
cagagtgtgatggaccttcaggagatttcatacaacaaagacgatgagatggactattct
gagaccctaagtaatgccttaaattcgtgtcatgactttgcatctcacttacagagactc
atcctgacccccttgtcagccctgctgtccttattcccagggcctcacaagctcatccag
aaacgctatgacaaactgctggattgcaacagctacctgcagcgatcaacgggagaggag
tcagacttggccaaaaaggagtatgaggccctcaacgcccagcttgtggaggagctccag
gcattcaaccaggctgctcggaagattctgttgaactgtctatgcagcttcattaccctc
cttagggacctgatgctcgtggcacagcaggcttactccacacttgtgccgatgccactg
ttggtttcaagcatttctgagattcagaatcaagtactagaagagatccaaaatttgaat
tgtgtgaaagaaaacagtgccacctttattgagaggaaactcagttttgaaaagaagaaa
cctgtgcagattctgccagaaatgccacatcaaactgacattcatcgctccaaacttcta
tccacatatagtgcagaggaactctatcaagctaagcgcaagtgcaatgctacacaagaa
tatgacatcaatcttctggaaggagacttggtggctgtgatagaacagaaagatccactg
gggagtacaagcaggtggcttgtggacacaggaaatgtgaaaggatatgtttattcctcc
ttcctaaaaccctacaatccagcaaaaatgcagaaagtggatgctgagaacaggttctgt
gacgatgattttgagaacatcagcctcttcgtgtcttcacggccagctagtgacagtgtc
acaggcacctcagaaagcagcattggtgatagcagctcatctcttagtggcacatgtgga
aagtttgaaacaaatggtactgatgttgacagttttcaagaagtagacgaacagattttc
tatgcagttcatgcttttcaagcacggagtgaccatgaactcagccttcaggaataccag
agagttcatatactcaggttttgtgacctaagtggcaataaagagtggtggttagctgaa
gctcaagggcagaaaggatacgtgccagctaactaccttggaaagatgacttatgcttaa

>gi568815594r:105582736_105800005|GENSCAN_predicted_peptide_2|137_aa
MAMNPHKTECTVFTWGHCTVTKRNYTKRLQRGNYKVLVATNVAPRGLDIPVVDLVIQSSP
PQDIESYIHLSGCVDRGVAGQASQVVDLAIGQVERVDKAVAQESRQDGRRRSGTEIDQEV
GATNGVLTEYLIVNLAV

>gi568815594r:105582736_105800005|GENSCAN_predicted_CDS_2|414_bp
atggccatgaatccgcacaaaacagaatgcactgtgtttacatggggacattgcacagtc
acaaagagaaattacactaaaaggcttcagagaggtaattataaagttttggtggcaacc
aatgtggctcctcgtggtttggacattcctgtagttgacctggtgattcaaagttctcct
cctcaggatattgagtcctatatccatctctctggatgcgtggacagaggagtggctggt
caggccagtcaggttgtcgatctggcaattggtcaggtagagagagtcgacaaagcagtt
gctcaggaaagtcggcaagatggtagaagacgaagtggaacagaaatagatcaagaagtg
ggggccacaaatggagttttgactgagtatttgatagttaatttagcagtgtga

>gi568815594r:105582736_105800005|GENSCAN_predicted_peptide_3|638_aa
MKCPSWNSKAASGSCCPQTTRLHRRQEKNDSHLMWKILAPAVIHNPADRKKGSNVTSYCR
TAKRFPRPYCGNLCFPAFGAGQCGNRFRRDHREQTDRQGGAEREDCASSEGVAGRDMRTE
HISRSRDKGLGILPRTLSEGFSDFSTSTQLHQVADLFMTAVESKLLSLYGYLPAFAMAAT
VNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKISSTKN
ISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRLEKPE
TQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQECHN
LYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPAVKDP
LVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKTSSAG
PSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPLKPPP
PLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKTTSES
SSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK

>gi568815594r:105582736_105800005|GENSCAN_predicted_CDS_3|1917_bp
atgaaatgtccgagctggaattccaaggctgcctctgggagctgctgcccgcagaccact
cgcctccacagacgccaggagaaaaacgacagccaccttatgtggaaaatactcgcgccg
gccgtcattcataatccggcggaccggaaaaagggaagtaacgtcacttcctactgtcgc
actgccaaacgtttcccccgcccctactgtgggaacctttgttttcctgctttcggagcc
ggccagtgcgggaaccgtttccgaagggaccaccgggaacagacggatcggcagggcggg
gcggaacgtgaggactgtgcttcctccgagggagttgcgggccgggacatgcggaccgag
catatttctaggtctagggacaagggacttggaatcctgcctcggactttgtcggagggt
tttagtgacttctctacatcaacacagttacaccaagttgctgacctctttatgactgct
gtagaaagtaaacttctttcactatatggatatttgccggcgtttgcaatggctgctact
gtgaacttggaacttgatcccatttttttgaaagcactaggtttcttgcattcaaagagt
aaagattctgctgaaaagctaaaagcactgcttgatgaatctttggctcggggcattgat
tccagttaccgtccatctcaaaaggatgtggagccacccaaaatttcaagcacaaaaaac
atttccattaagcaagagcccaaaatatcatccagtcttccttctggtaataataatggc
aaggtcctcacaactgaaaaggtaaagaaggaagctgaaaagagacctgctgataaaatg
aaatcagacatcactgaaggagttgatattccaaagaaacctagattggagaaaccagaa
acacagtcatctcccattactgtccaaagtagcaaggatttacctatggctgacctttcc
agttttgaggagaccagtgctgatgattttgccatggagatgggattggcctgcgttgtt
tgtaggcaaatgatggtggcatctggcaatcaattagtagaatgtcaggagtgccataat
ctctaccaccgagattgtcataaaccccaggtgacagacaaggaagcgaatgaccctcgc
ctggtgtggtattgtgcccgatgtaccagacaaatgaaaagaatggctcaaaaaactcag
aaaccaccgcagaaaccagcccctgcagttgtttctgtaactccagctgtcaaagatcca
ttggttaagaaaccagaaactaaactgaaacaagagacaacttttctagcgtttaagaga
acagaagtcaagacatccacagttatttcaggaaattcttctagtgccagcgtttcctcg
tcagtaactagtggcttaactggatgggcagcttttgcagccaaaacttcctctgctggt
ccttcaacagcaaaattgagttcaacaacacaaaacaatactgggaaacctgctacttcg
tcagctaaccagaaacctgtgggtttgactggtctggcaacatcatccaaaggtggaata
ggttccaaaataggttccaataacagcactacgcccactgtacctttaaaaccacctcca
cctctaaccttgggtaaaactggccttagtcgctcagttagttgtgacaatgtcagcaaa
gtaggtcttcctagtccaagtagtttagttccaggaagcagcagccaactaagtgggaat
ggaaatagtggaacatcaggacctagtggaagtactaccagcaaaactacttcagaatcc
agcagctctccctcagcatcccttaaaggcccaacttcacaagaatcacagctcaatgct
atgaagcgattacagatggtcaagaagaaagctgcccaaaagaaactcaagaagtaa

>gi568815594r:105582736_105800005|GENSCAN_predicted_peptide_4|386_aa
MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSRDS
SLLRDDLIQDVEIQIISRQELPPIVQNCCLPAVVERSDNFCRAGLAVVLRHIIQKSYEAD
PLKKELLELLGFKKTCLKACAEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLE
KKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELK
VAFSKLTVQEEPATTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVI
ISRKFSEKLVEFPLLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVP
GVEEQSDPLFIGGPRPTMAKLMVLNY

>gi568815594r:105582736_105800005|GENSCAN_predicted_CDS_4|1161_bp
atgaaagccataaagaaaagtcttacagaagaagaatacctgtacctggacttttctcac
caaacagaaggatgcatctttcctcttcatacatctgtaactttatttctgttatcttac
tgtgactgtaaaatctttaaaatttgcttagttgtcaccaaagaggtgagtagagatagt
tcactactaagagatgacctgatccaggatgttgaaatacagattatttcaaggcaggag
ctcccaccaatagtccaaaattgctgtttgcctgcagtagtagaacgatcagacaatttt
tgtagagcaggacttgctgttgtattgagacacataatccagaaatcctatgaagcagac
cccttaaagaaggaacttttggaacttctgggctttaaaaagacttgcttgaaagcctgt
gctgaagttagtcagtggaccaggctatgtgaactcaccatccctttggctattgagaat
tttctcagagaatcttctgaccagcccccaactatacctgtagaaatactacagctagag
aaaaagcttagtgagcctgttagagtgcataatgatgataaactccgcaggcagaagctc
aagcaacagaaggctgatggagttgggcctccccttactaagggaaaggcaaagagcaag
gtccacacacaggaaacatctgaagggttggattcttcatccaagagtctggaactgaaa
gtggcattctcaaagctcacagtacaggaagaaccagctactaccaacagagagccttct
cacatcagaaaagcaaaagcctccgaccttccacctctggagcatgtgtttgcagaaggg
ctttacttcactctggcagatattgtgctcttgccctgtatccatcatttcttggtaatt
atcagcaggaaattttctgagaagctggtagaatttccattgctagcctcttggtaccag
aggattcaggaagtgccaggagtaaaaacagcagcttctaagtgtgggatccaatttctc
catttaccaaagttgttgacaacctcaactgaacagcatccaaacttatgtgaagtccca
ggtgtagaagagcaaagcgatcctttatttataggaggaccaagaccaaccatggccaag
ttaatggtacttaattattaa

>gi568815594r:105582736_105800005|GENSCAN_predicted_peptide_5|175_aa
MSELPFTIVSKRIKYLGIQLTRDVKDLFKENYKLLLNEIKEDTNKWKNIPCSWIGRINIV
KMAILPKVIYRFNVILIKLPMTFFTKLEKTTLKFIWNQKRARIAKTILSQKNKAGDITLP
DFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIIPHIYNHLIFDKPDKNKKFPI

>gi568815594r:105582736_105800005|GENSCAN_predicted_CDS_5|528_bp
atgagtgaactcccattcacaattgtttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaactcctgctcaatgaaataaaa
gaggacacaaacaaatggaagaacattccatgctcatggataggaagaatcaatattgtg
aaaatggccatactgcccaaggtaatttatagattcaatgtcatcctcatcaagctacca
atgactttcttcacaaaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcattgccaagacaatcctaagccaaaagaacaaagctggagacatcacactacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagaccaatggaacagaacagagccctcagaaataataccacacatctacaac
catctgatctttgacaaacctgacaaaaacaagaaattccccatttaa

>gi568815594r:105582736_105800005|GENSCAN_predicted_peptide_6|225_aa
MEERESVTEDQMNEMKQEEKFREKRVKRNEQSLQEIWDYVKRPNPWLIGLPESDGENGTK
LENTLQDIIQENFPNLARQANIQIQEIRRMPQRCSSRRATPRHIIVRFTKVEMKEKMLRA
AREKGRGTHKRKPIRLTADLSAEILQARREWGPIFNILKEKNFQPRISYPAKLSFISEGE
IKSVTDKQMLRDFVTTRPALKELLKEALNMERKNRYQPLQKHAKL

>gi568815594r:105582736_105800005|GENSCAN_predicted_CDS_6|678_bp
atggaagaaagggaatcagtgactgaagatcaaatgaatgaaatgaagcaagaagagaag
tttagagaaaaaagagtaaaaagaaatgaacaaagcctccaagaaatatgggactatgtg
aaaagaccaaatccatggctgattggtttacctgaaagtgacggggagaatggaaccaag
ttggaaaacacgctgcaggatattatccaggagaacttccccaacctagcaaggcaggcc
aacattcaaattcaggaaatacggagaatgccacaaagatgttcctcgagaagagcaact
ccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggca
gccagagagaaaggtcggggtacccacaaaaggaagcccatcagactaacagctgatctc
tcagcagaaatcctacaagccagaagagagtgggggccaatattcaacattcttaaagaa
aagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaa
ataaaatccgttacagacaagcaaatgctgagagattttgtcaccaccaggcctgcccta
aaagagctcctgaaggaagcactaaacatggaaaggaaaaaccgctaccagccactgcaa
aaacatgccaaattgtaa

>gi568815594r:105582736_105800005|GENSCAN_predicted_peptide_7|230_aa
XAPAEQSFQRKEQAAIFAVLQPPLVIPRQTGCGADLQQTPADLQQTGLSVRKKTDKQKGI
ASTSTKRTSTQKPHPKITNMKTKEIQTTIKEYYEHLYTNKLENLQEMDKFLDTYTFPGLN
QEEVQSLNRPITSSEIEAVINSLPTKKSPGPDRFTAEFYQRYKEKLVLFLLKLLQTTEKE
GLLPNSFYEANIILILKPGRDTTKKENFRLISMMNFEAKILNKILANQIQ

>gi568815594r:105582736_105800005|GENSCAN_predicted_CDS_7|693_bp
ngtgcccctgcggaacaaagcttccagaggaaggaacaggcagcaatctttgctgttctg
cagcctccactggtgatacccaggcaaacagggtgtggagcagacctccagcaaactcca
gcagacctgcagcagacgggactgagtgttagaaagaaaactgataaacagaaaggaata
gcatcaacatcaacaaaaaggacgtccacacagaaaccccatccaaagatcaccaacatg
aagaccaaagaaatacaaactaccataaaagaatactatgaacacctctatacaaataaa
ctagaaaatctacaagaaatggataaattcctggacacatacaccttcccaggactaaac
caggaagaagtccaatccctgaatagaccaataacaagttctgaaattgaggcagtaatt
aatagcctaccaaccaaaaaaagtccaggaccagacagattcacagccgaattctaccag
aggtacaaagagaagctggtactattccttctgaaactattgcaaacaacagaaaaagag
ggactcctccctaactcattttatgaggccaacatcatcctgatactaaaacctggcaga
gacacaacaaaaaaagaaaacttcaggctaatatccatgatgaactttgaagcaaaaatc
ctcaataaaatactggcaaaccaaatccagtag