GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:23:03

Sequence gi568815594r:100315896_100617914 : 302019 bp : 36.22% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5320   5347   28  0  1   79   92    36 0.809   2.91
 1.02 Intr +   5466   5651  186  1  0   73  116   104 0.586  10.44
 1.03 Term +  15834  16231  398  1  2   51   38   118 0.031  -2.65
 1.04 PlyA +  16771  16776    6                               1.05

 2.00 Prom +  18201  18240   40                              -3.65
 2.01 Init +  18978  19143  166  2  1   80   87    71 0.807   6.04
 2.02 Term +  37018  37118  101  2  2   26   37   202 0.499   6.21
 2.03 PlyA +  37157  37162    6                               1.05

 3.00 Prom +  45484  45523   40                              -7.95
 3.01 Init +  45612  45706   95  2  2   59   97    42 0.476   2.10
 3.02 Intr +  47404  47489   86  1  2  122   80    41 0.702   5.24
 3.03 Intr +  61663  61865  203  2  2  -12   29   142 0.006  -3.62
 3.04 Intr +  64417  64774  358  0  1   30   88   222 0.201  10.30
 3.05 Term +  65135  66789 1655  0  2   -6   47   604 0.895  35.53
 3.06 PlyA +  67597  67602    6                               1.05

 4.05 PlyA -  68995  68990    6                               1.05
 4.04 Term -  92356  92112  245  2  2   32   41   206 0.449   5.38
 4.03 Intr - 100064 100003   62  1  2   80  119    68 0.878   6.56
 4.02 Intr - 101246 101218   29  2  2  102   71    30 0.403  -1.30
 4.01 Init - 107161 106958  204  1  0   55   89   161 0.778  11.80
 4.00 Prom - 124731 124692   40                              -4.15

 5.09 PlyA - 124759 124754    6                               1.05
 5.08 Term - 127486 127361  126  1  0   44   48   149 0.819   3.80
 5.07 Intr - 129138 129092   47  1  2   63  121    15 0.189  -0.49
 5.06 Intr - 131676 131638   39  1  0   96  115     1 0.121   0.88
 5.05 Intr - 149644 149528  117  2  0  124   89    50 0.752   8.22
 5.04 Intr - 159214 159143   72  2  0   83  113    10 0.620   1.46
 5.03 Intr - 164144 164022  123  0  0  112   97   107 0.990  13.64
 5.02 Intr - 170885 170719  167  1  2   78   61    50 0.194  -0.02
 5.01 Init - 207249 207200   50  0  2   68   87    75 0.212   5.87
 5.00 Prom - 211963 211924   40                              -3.65

 6.02 PlyA - 212247 212242    6                              -0.45
 6.01 Sngl - 212904 212422  483  0  0   22   38   299 0.620  14.12
 6.00 Prom - 221417 221378   40                              -5.55

 7.00 Prom + 224710 224749   40                              -3.65
 7.01 Init + 230148 230241   94  2  1   68   16   120 0.036   3.39
 7.02 Intr + 243374 243524  151  0  1   82   88   140 0.206  11.70
 7.03 Term + 245162 245570  409  2  1    4   38   231 0.330   3.40
 7.04 PlyA + 245610 245615    6                               1.05

 8.02 PlyA - 248703 248698    6                               1.05
 8.01 Sngl - 265633 265373  261  1  0   58   41   193 0.799   6.51
 8.00 Prom - 285425 285386   40                              -3.65

 9.00 Prom + 288871 288910   40                              -5.95
 9.01 Init + 291839 291941  103  1  1   60   68   129 0.941   8.55
 9.02 Intr + 292099 292263  165  2  0   36   44   165 0.896   5.91
 9.03 Intr + 292784 292968  185  0  2   56   35   137 0.918   3.79
 9.04 Term + 293272 293427  156  0  0   33   43   184 0.963   5.35
 9.05 PlyA + 293691 293696    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:100315896_100617914|GENSCAN_predicted_peptide_1|203_aa
MVEQPFEDSVRIHGVQESRGGNGVASLTIIRSDSLAIFLLPVSVTLCSAGLEVLVPKVGM
LQPEDNNIELEGDFGAPTGPYLPGTKLPEGGTGCHLCCFVAFTGSEKSEVTRDWSGPQAY
CSSPVEKARLLRGCPLPYLLTRQILQPRPARAIEQVSTQQLPRQSSGATKSLSATASAWN
CPCHSQTNEGTKTLRALSRPPIS

>gi568815594r:100315896_100617914|GENSCAN_predicted_CDS_1|612_bp
atggtggaacagccttttgaggactcagtcaggattcatggagtacaagaatcaaggggt
ggaaatggagtggcatcactcactattatccgtagtgactcactagcaatttttttgctt
cctgtttctgtgaccttatgctctgccggtctagaggtcttagttccaaaggtaggaatg
ttgcaaccagaagacaacaatattgaactggaaggtgacttcggggcaccaacaggtcca
tatctccctgggacaaagctcccagagggaggaacaggttgccatctttgctgttttgta
gccttcacaggttccgaaaaatctgaagtgactagggactggagtgggccccaagcatat
tgcagcagccctgtggaaaaggccagactgttacgtgggtgcccactcccatatctcctc
accagacagatcctccagccacgtcctgccagagctattgagcaagtatcaactcagcaa
ctccctagacagagttcaggggcaaccaaaagcctctcagccactgcctctgcatggaac
tgcccttgccactctcagactaatgaaggaacaaagaccctaagagctttatccagacct
ccaataagctaa

>gi568815594r:100315896_100617914|GENSCAN_predicted_peptide_2|88_aa
MLLGHSAIKIEFTTIKIAQNCTITWKLNNILMNYFCVNNEINAEIKKFFENNENKEEEEG
GGGGGKEEEEEEEEEEEEEAAKQNFLEN

>gi568815594r:100315896_100617914|GENSCAN_predicted_CDS_2|267_bp
atgctcttgggccacagtgcaataaaaatagaattcaccacaataaaaattgctcaaaac
tgtacaattacctggaaattaaacaacatccttatgaattacttttgtgtaaataatgaa
attaatgcagaaatcaagaagttttttgaaaataatgagaacaaagaagaagaagaagga
ggaggaggaggagggaaggaggaggaggaggaagaggaggaggaagaggaggaggaggca
gcaaaacaaaattttttggagaattga

>gi568815594r:100315896_100617914|GENSCAN_predicted_peptide_3|798_aa
MGTVGGEIVGGSTSECAFTKFISSASSGSYIRRVVSNNSLAGLLLSWHLLLRGPELTQEE
SEQTSTRWVPKPLGPDQLQTKAELSMEILNKWDQDPEAFLRRIITGDETWLTSTIPKTNH
NQNNSYQEDSVQTTLSTGPEPGRLAGWLDPVKRQQSLHFSSQEATSIGREGSTTSRKHPV
GQKNLNNSLQPQTFPLTQPAQVRRNQKTNSGNTTKQASLTPPQNPTSSSAMNPNQEEIPD
LPEKNSGEEENSKSLENISGGIIKENFPSLARDLDIQIEEAQRTPGKFITKRSSPRHIVI
RLSKVKTKHINRIKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRAIYDK
PTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVK
LSLFADDMIVYLENPIISAPNLLKLISNFSKVSGYKITVQKSQAFLYTNNRQTESQIMSE
LTFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDINKWKNIPCSWAGRINIVKMA
ILPKVIYRFNAIPIKLPVTFFTELEKTTLKFIWNQKRARIAKSVLSQKNKAGSIMLPDFK
LYYKATVTKTAWYWYQNRDIDQCNRTEPSEIMLHIYNHLIFDKPDKNKQWGKDSLFNKWC
WENWLAIGRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDFMS
KTPKAMATEAKIDKWDLIKLKSFCTAKATTIRVNKQPTKWEKIFATYSSDKGLISRIHDE
LQQIYKEKTTPSKSGQRI

>gi568815594r:100315896_100617914|GENSCAN_predicted_CDS_3|2397_bp
atgggcactgtgggtggtgagattgtgggaggctcaacttcagaatgtgcttttacaaaa
ttcatatcatcagcaagttctgggtcttacataaggagagttgtctccaataactctctt
gcaggtctactactgtcttggcatctgctcctcagaggacctgagctaacacaagaagaa
agtgagcaaacttccactcgatgggtgccaaaaccattgggcccagatcagctacagaca
aaagcagagctttcaatggaaattttaaacaagtgggatcaagatcctgaagcatttctt
cgaagaattataacaggagatgaaacatggctcaccagtacaatcccaaagacaaatcac
aatcaaaacaatagttaccaagaggactctgtgcagacaaccctcagtaccggtccagag
ccaggtagacttgctgggtggctagacccagtaaagagacaacaatcactgcacttcagc
tcacaggaagccacatccataggaagagaggggagtactacatcaaggaaacaccctgtg
ggacaaaagaatctgaacaacagccttcagccccagaccttccctctgacacagcctgcc
caagtgagaaggaaccagaaaaccaactctggtaatacaacaaaacaagcttctttaaca
ccgccacagaatcccactagttcctcagcaatgaatccaaaccaagaagaaatccctgat
ttacctgaaaagaattcaggagaagaagagaattctaaaagcttggaaaacatatctggg
ggaataatcaaggaaaactttcccagccttgctagagacctagacatccaaattgaagaa
gcacaaagaacacctgggaaattcatcacaaaaagatcatcgcctaggcacattgtcatc
aggttatccaaagttaagacaaagcatataaacagaatcaaagacaaaaaccacatgatt
atctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaaact
ctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctatgacaaa
cccacagccaatatcatactgaatgggcaaaaactggaagcattccctctgaaaactggc
acaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctggcc
agggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaa
ttgtccctgtttgcagatgacatgattgtatatctagaaaaccccatcatctcagcccca
aatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcactgtgcaa
aaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagtgaa
ctcacattcacaattgcttcaaagagaataaagtacctaggaatccaacttacaagggac
gtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatata
aacaaatggaagaatattccatgctcatgggcaggaagaatcaatatcgtgaaaatggcc
atactgcccaaggtaatttatagattcaatgccatccccatcaagctaccagtcactttc
ttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcatc
gccaagtcagtcctaagccaaaagaacaaagctggaagcatcatgctacctgacttcaaa
ctatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatata
gatcaatgcaacagaacagagccctcagaaataatgctgcatatctacaaccatctgatc
tttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgc
tgggaaaactggctagccataggtagaaagctgaaactggatcccttccttacaccttat
acaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccataaaaacc
ctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgtct
aaaacaccaaaagcaatggcaacagaagccaaaattgacaaatgggatctaattaaacta
aagagcttctgcacagcaaaagcaactaccatcagagtgaacaagcaacctacaaaatgg
gagaaaatttttgcaacctactcatctgacaaagggctaatatccagaatccatgatgaa
ctccaacaaatttacaaggaaaaaacaacaccatcaaaaagtgggcaaaggatatga

>gi568815594r:100315896_100617914|GENSCAN_predicted_peptide_4|179_aa
MQALQQPAGLIPVSNSNAFIHGSRYAECLNVTSKGEESDYGQPFLNFTEPAIPLQSHLTA
ACSENFPQAHQKMEMISKPQSDKESVKLLTVKTISHESVILNQNKMDEITEIEFRIWMAM
KITENQKIETHSEESEEFNKTIQGMKYEIAILRKNKTDLTELKNSPQEFHNTLEVLTAE

>gi568815594r:100315896_100617914|GENSCAN_predicted_CDS_4|540_bp
atgcaagcacttcagcaaccagccggtcttattccagtgagtaacagcaatgccttcatt
catggcagtagatatgcagaatgtttgaatgtgaccagtaaaggagaggaatcagattat
gggcagccttttctcaactttactgagcctgcaatcccattacaatcccatctaactgct
gcctgctctgaaaatttcccacaagcacaccagaaaatggaaatgatcagtaaacctcag
tctgataaagagagcgtgaagcttcttaccgttaagacaatttctcatgagtctgtgatt
cttaaccagaataaaatggatgaaattacagaaatagaattcagaatctggatggcaatg
aagatcactgaaaatcagaagattgaaacccattccgaggaatctgaggaattcaacaaa
accatacaaggaatgaaatatgaaatagccattttaagaaagaacaaaactgatctgaca
gagctgaaaaactcaccacaagaatttcataacacattggaagtattaacagcagagtag

>gi568815594r:100315896_100617914|GENSCAN_predicted_peptide_5|246_aa
MGHRAELLDMKFMAGNRYCCFLFNKLTTGMLSSCSPQSGQVAETPVQSQSLPGLALPPHL
TDGWQPEEIPLSGVLEAANNSLVVTTTKPSITTPNTESLQKNVVTPTTGTTPKGTITNEL
LKMSLMSTATFLTSKDEGLKATTTDVRKNDSIISNVTVTSVTLPNAVSTLQSSKPKTETQ
SSIKTTEIPVGINSKPEETPFCRKKRRPAQLAASDPYATESLPLLEFEKGNYITKCADIN
AGTQGT

>gi568815594r:100315896_100617914|GENSCAN_predicted_CDS_5|741_bp
atgggacatcgagcagaactcttggacatgaagttcatggctggcaatagatattgttgt
tttctgtttaacaaactcaccactggaatgctgtcttcctgttctccccagagcggccag
gtggctgagacacctgtccaatctcagagcctgccaggcttggcactccctccccacctc
acagatggctggcaacctgaggagattcctctttcaggtgttttagaggcagctaataat
tcacttgttgttactacaacaaaaccatctataacaacaccaaacacagaatcattacag
aaaaatgttgtcacaccaacaactggaacaactcctaaaggaacaatcaccaatgaatta
cttaaaatgtctctgatgtcaacagctacttttttaacaagtaaagatgaaggattgaaa
gccacaaccactgatgtcaggaagaatgactccatcatttcaaacgtaacagtaacaagt
gttacacttccaaatgctgtttcaacattacaaagttccaaacccaagactgaaactcag
agttcaattaaaacaacagaaataccagttgggatcaactcaaaaccagaagagacccct
ttctgcaggaaaaagaggcgccctgcccaactggcagcctcagacccatatgcaactgaa
agtcttcccctactagagtttgaaaaaggaaactacatcactaaatgtgcagacatcaat
gcagggacacaaggaacatga

>gi568815594r:100315896_100617914|GENSCAN_predicted_peptide_6|160_aa
MRQDVNKDIQDWNSALHQADLIDIYGTLHPKSTEYTFFSAPYCTYSKIDHIVGSKALFSK
CKRTKITTNCLSQHSAIKLELRIKKLTQNRSTTWKLNNLLLNDYEVNNKIKTEIKMFFET
NENNDTAYQNLWDTFKTVCKGKFIAQMPTGESRKDLKSTP

>gi568815594r:100315896_100617914|GENSCAN_predicted_CDS_6|483_bp
atgagacaggatgttaacaaggatatccaggactggaactcagctctgcaccaagctgac
ctaatagacatctacggaactctccaccccaaatcaacagaatatacattcttctcagca
ccatattgcacttattccaaaattgaccacatagttggaagtaaagcactcttcagcaaa
tgtaaaagaacaaaaatcacaacaaactgtctctcacagcacagtgcaatcaaattagaa
ctcaggattaagaaactcactcaaaaccgctcaactacatggaaactgaacaacctgctc
ctgaatgactacgaggtaaataacaaaataaagacagaaataaagatgttctttgaaacc
aatgagaacaacgacacagcataccagaatctctgggacacatttaaaacagtgtgtaaa
gggaaatttatagcacaaatgcccacaggagaaagcaggaaagatctaaaatcaacaccc
taa

>gi568815594r:100315896_100617914|GENSCAN_predicted_peptide_7|217_aa
MKATSVCARVLQLHTQSIMDQQLQHHLGAVRKPTQMRRNQKTNTGNMKKQGSSTPPKIHT
SSPAMDPNQEEISDLSEKEFRSTISDHSGIKLEINSKKNFQNHSNTWKLNKQLLSEHWVK
NKIKVEIKKFFELNDNNDTTYQNIWDTANAVLRGNLIASNDYIEKSEREQTDNLRSHLME
LEKKEQTKPKPSRRKEITKITAELNEIEITTTTTTKI

>gi568815594r:100315896_100617914|GENSCAN_predicted_CDS_7|654_bp
atgaaggcaacatcagtgtgcgccagagttttgcaactccacacgcagtccatcatggac
caacaactgcagcatcacctaggagctgttagaaagcctacccaaatgagaaggaaccag
aaaaccaacactggtaatatgaaaaaacaaggctcttcaacacccccaaaaattcacact
agttcaccggcaatggatccaaatcaagaagaaatctctgatttatctgaaaaggaattc
aggagcactatctcagaccacagtggaataaaactggaaatcaactccaaaaagaacttt
caaaaccactcaaatacatggaaattaaataaacagctcttgagtgagcattgggtcaag
aacaaaatcaaggtggaaattaaaaaattctttgaactgaatgacaataatgacacaacc
tatcaaaacatctgggatacagcaaatgccgtgctaagaggaaatctcatagcctcaaat
gactacatcgaaaagtctgaaagagaacaaacagacaatctaaggtcacacctcatggaa
ctagagaaaaaagaacaaaccaaaccgaaacccagcagaagaaaggaaataaccaagatc
acagcagaactaaatgaaattgaaataacaacaacaacaacaacaaaaatataa

>gi568815594r:100315896_100617914|GENSCAN_predicted_peptide_8|86_aa
MTVHESSRLDRAKTGSDRAPGNQQYSRGEFTEANRASVSGTLPHPDSLECAGVGSLECSM
RRGKAKLNLGSISGKLPKETLKKKQI

>gi568815594r:100315896_100617914|GENSCAN_predicted_CDS_8|261_bp
atgactgtgcatgaatcatccagactagatagggccaaaacaggttctgacagagcccca
ggcaatcagcagtacagcagaggtgaatttactgaagctaatagagcttcagtttcaggg
actcttcctcacccagattccttggagtgtgcgggagttgggagtttagagtgttctatg
agaagagggaaagccaaactgaatttagggagcatttctggcaaactgcctaaagagact
ctcaaaaagaaacagatctga

>gi568815594r:100315896_100617914|GENSCAN_predicted_peptide_9|202_aa
MKLRTLTVSVIALKVTLLESVPSDVQMCSEFLPSGVKLQTFAVSVMALKVARPELFVLPG
GLVVLLGSRVKLQVFAVSVTARKSSVDPKNSGTQLASPSGSRTGAAGGAACQSRALCLHS
SALGWWMGLDSMEQGVVLVGEAPAAQEPMEWLREWAPALASPERGSDSAAAKGSSSTAKV
GAQAEEAASEGCEDCQHAVTSQ

>gi568815594r:100315896_100617914|GENSCAN_predicted_CDS_9|609_bp
atgaagctgcggaccctcacggtgagtgttatagcccttaaggtgacgcttctggagtct
gtcccttctgatgttcagatgtgttcggagtttcttccttctggagtgaagctgcagacc
ttcgcggtgagtgttatggctcttaaggtagcgcgtccggagttgttcgttcttcccggt
gggctcgtggtcttgctgggctcaagagtgaagctgcaggtcttcgcggtgagtgttaca
gctcgtaaaagcagcgtggacccaaagaactcaggaacccagctggcttcacctagtgga
tcccgcaccggggctgcaggtggagctgcctgccagtccagggccctgtgcttgcattct
tcagcccttgggtggtggatgggactggactccatggagcagggggtggtgctcgtcggg
gaggccccggccgcacaggagcccatggagtggctgagggagtgggctccagccttggcc
agcccagaaaggggctccgacagtgcagcagcgaagggctcctcaagtaccgccaaagtg
ggagcccaggcagaggaggcagcgagcgagggctgtgaggactgccagcacgctgtcacc
tctcaatag