GENSCAN 1.0	Date run:  5-Nov-116	Time: 22:53:21

Sequence gi568815594f:74265309_74484805 : 219497 bp : 37.14% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    808    803    6                               1.05
 1.04 Term -   5174   5018  157  1  1   86   55    88 0.675   1.72
 1.03 Intr -   6390   6244  147  2  0   75   39   108 0.621   3.03
 1.02 Intr -   6835   6732  104  1  2   80    9    88 0.736  -1.85
 1.01 Init -  10108   9794  315  1  0   51   72   178 0.825   9.88
 1.00 Prom -  10157  10118   40                              -5.85

 2.00 Prom +  10254  10293   40                              -4.65
 2.01 Init +  11761  11809   49  0  1   95   81    44 0.509   5.56
 2.02 Term +  16117  16271  155  2  2   99   49   176 0.250  11.90
 2.03 PlyA +  16742  16747    6                               1.05

 3.04 PlyA -  17597  17592    6                               1.05
 3.03 Term -  18583  18511   73  0  1   85   47    72 0.073  -0.80
 3.02 Intr -  24078  23970  109  1  1   63   71   102 0.173   4.42
 3.01 Init -  30103  29986  118  1  1   71   98    76 0.920   7.31
 3.00 Prom -  37647  37608   40                              -2.85

 4.00 Prom +  40563  40602   40                              -7.95
 4.01 Init +  43787  43847   61  1  1   67   88   108 0.805  10.16
 4.02 Intr +  46877  46997  121  0  1   93   99   108 0.991  11.03
 4.03 Intr +  69563  69858  296  2  2   35  -25   231 0.000   2.23
 4.04 Intr +  99962 100067  106  0  1   94  106   136 0.361  14.35
 4.05 Intr + 105535 105569   35  1  2  133   44    12 0.095  -1.75
 4.06 Intr + 114140 114226   87  0  0   71   87    30 0.264   0.22
 4.07 Intr + 115706 115829  124  0  1   75   90    88 0.602   6.42
 4.08 Intr + 117337 117486  150  1  0  123  115    83 0.999  12.86
 4.09 Term + 119419 119500   82  1  1   73   42   108 0.925   0.89
 4.10 PlyA + 121119 121124    6                               1.05

 5.00 Prom + 123509 123548   40                              -6.95
 5.01 Init + 127907 127949   43  1  1   99   86    39 0.750   5.43
 5.02 Intr + 133207 133322  116  2  2   43  -12   143 0.055  -0.95
 5.03 Intr + 148046 148184  139  1  1  -22   19   299 0.473  11.12
 5.04 Intr + 151225 151249   25  2  1   82  113     2 0.359  -1.73
 5.05 Term + 156415 156658  244  1  1   61   48   231 0.461  10.79
 5.06 PlyA + 158004 158009    6                               1.05

 6.02 PlyA - 158562 158557    6                               1.05
 6.01 Sngl - 173119 172775  345  1  0   40   49   212 0.294   8.29
 6.00 Prom - 177188 177149   40                              -5.15

 7.00 Prom + 177553 177592   40                              -7.95
 7.01 Init + 179770 180070  301  0  1   88   -2   303 0.358  17.76
 7.02 Intr + 181226 181474  249  0  0  120  105   323 0.999  33.69
 7.03 Intr + 183739 183940  202  2  1   80  108    56 0.997   4.22
 7.04 Intr + 185072 185224  153  2  0   52  100   175 0.989  13.37
 7.05 Intr + 189451 189606  156  1  0   98   93    58 0.516   5.50
 7.06 Intr + 212965 213133  169  1  1   47  107    90 0.007   5.83
 7.07 Intr + 217988 218146  159  1  0   41   64   136 0.011   5.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  50122  50212   91  1  1   83   43   105 0.939   1.71
S.002 Intr - 216873 216737  137  0  2   18  110    97 0.882   3.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:74265309_74484805|GENSCAN_predicted_peptide_1|240_aa
MHTYIYRSAIYNNKDLEPNQMPINDGLDKENVVNIHCGILCSHKRERDHVLCRDMDEAGS
HYPQQTSTGTENQTPHVLIHKWELNNENTWTQERQQQTLGPVGGGDALFIASFDSDVDLP
IPLYPNQAQIEDIKAMPEFLIGKNYFKVHMEPKKSPHCQDNPKPKEQAGGIMLPDFKLYY
KATVTKTAWDMDEAGNHHSQQTVARTKNQTLHVLTHRWELNNENTWTQEGEHRTPGPVVG

>gi568815594f:74265309_74484805|GENSCAN_predicted_CDS_1|723_bp
atgcacacatatatttatcgcagcgctatttacaataacaaagacttggaaccaaaccaa
atgcccatcaatgatggactggataaagaaaatgtggtaaatatacactgtggaatacta
tgcagccacaaaagggaacgagatcatgtcctttgcagggacatggatgaagctggaagc
cattatcctcagcaaactagcacaggaacagaaaaccaaacaccgcatgttctcattcat
aagtgggagttgaacaatgagaacacatggacacaggaaaggcaacaacagacattgggg
cctgttgggggtggggatgccctattcatagctagtttcgatagcgacgtagacttacca
atacctttgtatccaaatcaagcccaaattgaagatatcaaagcgatgccagaattttta
attggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcactgccaagac
aatcctaagccaaaagaacaagctggaggcatcatgctacctgacttcaaactatactac
aaggctacagtaaccaaaacagcatgggacatggatgaagctggaaaccatcattctcag
caaactgttgcaagaacaaaaaaccaaacactgcatgttctcactcataggtgggaattg
aacaatgagaacacttggacacaggaaggggaacatcgcacaccggggcctgttgtgggg
tga

>gi568815594f:74265309_74484805|GENSCAN_predicted_peptide_2|67_aa
MEEQNGSQYLYCLHKNGIPKLITSDMVKEGAAVIDVGINYVHDPVTGKTKLVGDVDFEGN
KPISFDR

>gi568815594f:74265309_74484805|GENSCAN_predicted_CDS_2|204_bp
atggaggagcaaaatgggtcccagtacctctattgcttgcataagaatggtattccaaag
ttgattacgtctgatatggttaaagaaggtgctgctgtaattgatgtgggtatcaactat
gtccacgatccagtgacaggaaagacaaaattagttggagatgtggacttcgaaggtaat
aaaccaatatcttttgataggtga

>gi568815594f:74265309_74484805|GENSCAN_predicted_peptide_3|99_aa
MGIRERFVKLQKSCKIDGHLSREERERESNADTGKSKSKAHKNRQPGPPQGLAFAAPLAW
NAAPSSVHDSLLHLFRLSPDEQLEEQHVKTYHLPAPVGG

>gi568815594f:74265309_74484805|GENSCAN_predicted_CDS_3|300_bp
atggggatcagagaaagatttgtaaagctgcagaaaagctgcaagattgatggacacctg
agcagggaagaaagggaaagagaaagcaatgcagacacagggaagagtaaaagcaaagct
cataaaaaccgccagccaggcccccctcaaggtcttgcatttgctgctccacttgcctgg
aatgctgctccctcatctgtccacgactcccttcttcatttattcaggttaagtcctgat
gaacaacttgaagagcaacatgtcaaaacctatcacttgcctgctcctgtgggtggctga

>gi568815594f:74265309_74484805|GENSCAN_predicted_peptide_4|353_aa
MTALTEEAAVTVTPPITAQQADNIEGPIALKFSHLCLEDHNSYCINGACAFHHELEKAIC
RLQAVFGLKVGFHRGPVPICLGICLPPFAINPSSEEVHLTAVRIQTVTALNCFMLTGCTV
LGKRQSDLSEAYQSVSRVMGPGNGTHCPWLHLHDHLEFDAALRQAPAPAPIADDRGEEDG
DALCRQGPCAAALPGDKAAQLQGNKISFHLLQAVLSTTVIPSCIPGESSDNCTALVQTED
NPRVAQVSITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEHFFLTVHQPLSK
EYVALTVILIILFLITVVGSTYYFCRWYRNRKSKEPKKEYERVTSGDPELPQV

>gi568815594f:74265309_74484805|GENSCAN_predicted_CDS_4|1062_bp
atgacagcactgaccgaagaggcagccgtgactgtaacacctccaatcacagcccagcaa
gctgacaacatagaaggacccatagccttgaagttctcacacctttgcctggaagatcat
aacagttactgcatcaacggtgcttgtgcattccaccatgagctagagaaagccatctgc
aggcttcaggctgtctttggcttgaaggtcggctttcaccggggacctgtccctatctgc
ctaggaatctgtctgcctccttttgctatcaatccctcctctgaagaggtacatctaact
gctgttaggatacaaacagtaaccgctcttaactgcttcatgctaacagggtgcactgtt
ttgggaaaacggcagtcagatctctcagaggcctatcaaagtgtttcccgggtaatggga
ccaggaaatgggacccattgcccgtggctccatttgcatgaccatttggagtttgatgcc
gccctccgccaagccccagcgcccgctcccatcgccgatgaccgcggggaggaggatgga
gatgctctgtgccggcagggtccctgcgctgctgctctgcctggagataaggcagctcag
ttgcagggaaacaaaataagtttccatcttctacaggcagtcctcagtacaactgtgatt
ccatcatgtatcccaggagagtccagtgataactgcacagctttagttcagacagaagac
aatccacgtgtggctcaagtgtcaataacaaagtgtagctctgacatgaatggctattgt
ttgcatggacagtgcatctatctggtggacatgagtcaaaactactgcaggtgtgaagtg
ggttatactggtgtccgatgtgaacacttctttttaaccgtccaccaacctttaagcaaa
gaatatgtggctttgaccgtgattcttattattttgtttcttatcacagtcgtcggttcc
acatattatttctgcagatggtacagaaatcgaaaaagtaaagaaccaaagaaggaatat
gagagagttacctcaggggatccagagttgccgcaagtctga

>gi568815594f:74265309_74484805|GENSCAN_predicted_peptide_5|188_aa
MAEAKESLQVKHSKGVKLQTLAVSVVAHKGSVDPKSEQQQDLLQTVKEQCFHSLHGDDDG
DGGSDTDDYGDDDSGNGDNGDYNGGEGSDDDENKNGDDDGLLDKCVLSDLDLFYHRHYEE
EGEEEKKGEGKEEGEEEGKGKEDGEEKRKKKKEEKEDANGEEEEKEEKEGRREEERKERR
TKERKHIH

>gi568815594f:74265309_74484805|GENSCAN_predicted_CDS_5|567_bp
atggctgaagccaaagaatcacttcaagttaaacactccaaaggagtgaagctgcagacc
ttggcggtaagtgttgtagctcataaaggcagtgtggacccaaagagcgagcagcagcaa
gatttattgcaaacagtgaaagaacaatgcttccacagcttacatggtgatgatgatggt
gatggtggtagtgatactgatgactatggtgatgatgacagtggcaatggtgataatggt
gattataatggtggtgagggtagtgatgatgatgagaataagaatggtgatgatgatggc
ttactagataagtgtgtgctaagtgatttagacttattttaccatcgtcactatgaagaa
gaaggagaggaagaaaaaaaaggagaaggaaaagaggaaggggaagaggaggggaagggg
aaggaagatggggaggaaaagagaaagaagaaaaaagaagaaaaggaggatgctaatggg
gaggaggaggaaaaggaagagaaagagggaagaagagaggaagaaaggaaggaaagaagg
acaaaagaaagaaaacacatacattaa

>gi568815594f:74265309_74484805|GENSCAN_predicted_peptide_6|114_aa
MVYNYRDLEEGKREQSKEKQQAKIMAAIIGDALNAQKASKGNPKGHKDNANRGSCFKCKE
PGHWTKDYTKPLPKPGQKCEGASYDPWHWRCWLPPLPPRSSVRQNSSSAKRGIR

>gi568815594f:74265309_74484805|GENSCAN_predicted_CDS_6|345_bp
atggtgtataactaccgtgatctggaagaaggaaaaagggaacagagtaaagaaaaacag
caagccaaaattatggcagccatcattggtgatgccctgaatgcccaaaaagcatccaag
ggaaacccaaagggccacaaagataatgccaacaggggctcttgtttcaagtgcaaggaa
cctgggcattggacaaaggactataccaagcctctgccaaaacccggccaaaaatgtgag
ggtgccagttatgatccttggcactggaggtgttggctgcctccactcccaccaaggagc
tcagtcaggcaaaactccagcagtgctaaaagaggaatcagatga

>gi568815594f:74265309_74484805|GENSCAN_predicted_peptide_7|463_aa
MGCGPLPAEPIKRQVRAALQTFAHLGASAPEVPGQPEAPRPPPRAPQAFESGAHSRSPLA
LPTPARFGGSSCPRDRVAPETETPPLRRTNESPAATAGAGGHYAAGLDLNDTYSGKREPF
SGDHSADGFEVTSRSEMSSGSEISPVSEMPSSSEPSSGADYDYSEEYDNEPQIPGYIVDD
SVRVEQVVKPPQNKTESENTSDKPKRKKKGGKNGKNRRNRKKKNPCNAEFQNFCIHGECK
YIEHLEAVTCKCQQEYFGERCGEKSMKTHSMIDSSLSKIALAAIAAFMSAVILTAVAVIT
VQISHWSHCQVIAINDESVLFPVDHKTMDPFCYDGFKLSIVTFYAISVYKGARRYPLSTV
QDTETTNISINNFSLTTENLLSTIGIMVKKVDKAPTLKKFTDDCRRNKTERTSYPGILGT
EKSHEERVEESRDKNLLCPFYRGQKSSTLREHNAAIAQIAFLQ

>gi568815594f:74265309_74484805|GENSCAN_predicted_CDS_7|1389_bp
atgggctgcggccccctcccggctgagcctataaagcggcaggtgcgcgccgccctacag
acgttcgcacacctgggtgccagcgccccagaggtcccgggacagcccgaggcgccgcgc
ccgccgccccgagctccccaagccttcgagagcggcgcacactcccggtctccactcgct
cttccaacacccgctcgttttggcggcagctcgtgtcccagagaccgagttgccccagag
accgagacgccgccgctgcgaaggaccaatgagagccccgctgctaccgccggcgccggt
ggccattatgctgctggattggacctcaatgacacctactctgggaagcgtgaaccattt
tctggggaccacagtgctgatggatttgaggttacctcaagaagtgagatgtcttcaggg
agtgagatttcccctgtgagtgaaatgccttctagtagtgaaccgtcctcgggagccgac
tatgactactcagaagagtatgataacgaaccacaaatacctggctatattgtcgatgat
tcagtcagagttgaacaggtagttaagcccccccaaaacaagacggaaagtgaaaatact
tcagataaacccaaaagaaagaaaaagggaggcaaaaatggaaaaaatagaagaaacaga
aagaagaaaaatccatgtaatgcagaatttcaaaatttctgcattcacggagaatgcaaa
tatatagagcacctggaagcagtaacatgcaaatgtcagcaagaatatttcggtgaacgg
tgtggggaaaagtccatgaaaactcacagcatgattgacagtagtttatcaaaaattgca
ttagcagccatagctgcctttatgtctgctgtgatcctcacagctgttgctgttattaca
gtccagatatcacattggagtcactgccaagtcatagccataaatgatgagtcggtcctc
tttccagtggatcataagacaatggaccctttttgttatgatggttttaaactttcaatt
gtcactttttatgctatttctgtatataaaggtgcacgaaggtatccattgagcactgta
caagatactgaaacaaccaacatttcaatcaacaacttttcattgaccactgaaaatctc
ctaagtactataggtataatggtgaagaaggtagataaagcccctactcttaagaagttt
acagacgattgtagaaggaataaaaccgagagaacaagttatccaggaattctaggtacc
gaaaagagtcatgaagaaagggtggaggaaagtagagataagaatctcttatgtcctttt
tatcggggacagaaatcttcaacattaagagagcacaatgctgctattgcacagatagcc
tttctccag