GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:29:51

Sequence gi568815594r:69741997_69957644 : 215648 bp : 35.77% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    948   1126  179  1  2   44   93    76 0.381   2.42
 1.02 Term +   2294   2509  216  1  0  121   45   146 0.376   9.76
 1.03 PlyA +   2669   2674    6                              -0.45

 2.05 PlyA -   3131   3126    6                               1.05
 2.04 Term -   5819   5632  188  0  2   74   37   114 0.273   1.57
 2.03 Intr -  12802  12674  129  2  0   90   99    91 0.877  10.15
 2.02 Intr -  13265  13074  192  0  0   95  109    94 0.859  10.74
 2.01 Init -  20812  20692  121  1  1   68   74    85 0.698   5.50
 2.00 Prom -  23626  23587   40                              -7.05

 3.03 PlyA -  24036  24031    6                               1.05
 3.02 Term -  31501  31434   68  2  2  121   43    59 0.260   1.82
 3.01 Init -  41123  40979  145  2  1   89   59   100 0.415   7.54
 3.00 Prom -  43535  43496   40                              -7.55

 4.03 PlyA -  43652  43647    6                               1.05
 4.02 Term -  49985  49876  110  0  2   97   48   101 0.983   4.69
 4.01 Init -  58887  58761  127  0  1   43   65   119 0.320   5.47
 4.00 Prom -  59004  58965   40                              -4.25

 5.00 Prom +  64678  64717   40                              -3.05
 5.01 Init +  64930  65146  217  0  1   60   56   176 0.448  10.50
 5.02 Intr +  75972  76094  123  1  0   94    0    94 0.028   0.84
 5.03 Intr +  84355  84470  116  2  2   67   70    80 0.310   3.35
 5.04 Intr +  84965  85066  102  1  0  102   88    55 0.730   6.35
 5.05 Term +  85721  86038  318  1  0   62   42   201 0.873   6.80
 5.06 PlyA +  86207  86212    6                               1.05

 6.02 PlyA -  86682  86677    6                              -3.24
 6.01 Sngl -  87571  87104  468  1  0   48   33   334 0.955  19.78
 6.00 Prom -  87820  87781   40                             -13.20

 7.08 PlyA -  88520  88515    6                              -0.45
 7.07 Term -  88894  88574  321  1  0   22   54   246 0.880   8.44
 7.06 Intr -  89194  89018  177  1  0   80   96   113 0.732  10.49
 7.05 Intr -  96561  96493   69  0  0   65   73    67 0.006   1.36
 7.04 Intr -  96888  96798   91  2  1   26   91    39 0.001  -2.92
 7.03 Intr - 102345 102165  181  1  1   84   76   172 0.029  13.60
 7.02 Intr - 113430 113305  126  1  0   62   52    66 0.459   0.13
 7.01 Init - 115648 115504  145  1  1   79   59   139 0.979  10.43
 7.00 Prom - 128407 128368   40                              -4.95

 8.02 PlyA - 129816 129811    6                               1.05
 8.01 Sngl - 141896 141585  312  2  0   73   42   160 0.450   5.58
 8.00 Prom - 147383 147344   40                              -4.95

 9.02 PlyA - 147574 147569    6                               1.05
 9.01 Sngl - 173611 173132  480  1  0    9   48   258 0.800   9.73
 9.00 Prom - 178337 178298   40                              -2.35

10.04 PlyA - 178647 178642    6                               1.05
10.03 Term - 181876 181704  173  2  2   52   42   164 0.907   5.21
10.02 Intr - 182894 182664  231  0  0   38    8   202 0.111   4.02
10.01 Init - 183099 182997  103  0  1   47   68    98 0.675   2.22
10.00 Prom - 185637 185598   40                              -3.65

11.04 PlyA - 186407 186402    6                               1.05
11.03 Term - 204918 204804  115  2  1  108   47    75 0.333   2.46
11.02 Intr - 210062 210013   50  2  2   92   91    34 0.447   0.66
11.01 Init - 215610 215278  333  0  0   61   84   183 0.653  12.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  75972  76141  170  1  2   94   41   117 0.817   4.66
S.002 Term - 100110  99998  113  1  2  108   48   133 0.974   9.04
S.003 Init + 190560 190610   51  2  0   83   95    41 0.863   4.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_1|131_aa
XDTEEHSGTQKLGDTRNHRALKRVSQPWLRELLGLGSLKGHRSSLFLSSVFLVTHKVVSK
RRRSGPGQLCTKEPDTVEALDLEVGPARPCKGKGGAVGCYGVMGHRGPTAAFAVPAAAPA
TTTHVSPLQPM

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_1|396_bp
nctgataccgaggaacacagtggcacccagaagcttggagacaccaggaaccacagagcc
ctaaagagggtgtcacaaccctggctcagggagctcctaggtttgggctccttgaagggc
cacaggtcttctctctttctctcttctgtctttcttgtcacacacaaggtggtgagcaag
cggaggcgcagcggccctggccaactttgtacaaaggaacccgacacagtggaggctctg
gacctggaagtgggtcctgcccggccatgcaaaggtaagggtggtgcagtaggctgctat
ggggtcatggggcacaggggtcccactgccgcctttgctgttcctgcagccgctcctgcc
accaccacccatgtctccccactgcagccgatgtga

>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_2|209_aa
MTLNEHAAFKRLFNKAHLAPPLIHSTLSGHSTCFREHRVGEQLSIYYIFVQSGIKMLSPK
DILRKDLKLVHGYPMTCAFASNWEKIEQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDG
DIEKCKRGFITEKVPMLEMTLPGLRTSAPREGVSETDMEQPTLTMDLQDPSCRRLLDAQR
HFSWQGELPRELAETVLYAVWSPEGLVQE

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_2|630_bp
atgactctcaatgagcatgctgccttcaagcgtctgtttaacaaagcacatcttgcaccg
cccttaatccattcaaccctgagtggacacagcacatgtttcagagagcacagggttggg
gaacaactgtcaatctattatatatttgtacaatctggtattaaaatgctttccccaaaa
gatattctgcgaaaagatctgaagttggtccatggttatcccatgacctgtgcttttgca
agcaactgggaaaaaattgaacagttccatagcagaccagatgacattgtgatagccact
tatcctaaatcaggtactacttgggttagtgaaattatagacatgattctaaatgatgga
gatattgaaaaatgtaagcgaggttttattactgaaaaagttccaatgttggaaatgact
ctccctggattaagaacatcagctcctagagaaggagtgagtgaaacagacatggaacag
cccactcttaccatggacctccaggatcctagctgcaggagactccttgatgcccagaga
cattttagctggcagggagaacttcccagagaattggcagagacagtactctacgctgtg
tggagtccagagggtttggtgcaggaatag

>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_3|70_aa
MEQIVGCRPWAQPSGVSGSAVTHGRAEPRDVTPHRASSTGTGTRHPWKGEPFILREQRDE
DPSSVTFSAE

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_3|213_bp
atggagcagatcgtgggctgcaggccctgggcccagccatcgggggtgtcaggctcagca
gtcacccatggcagggcagaacccagggatgtgactccacacagagcctcctctacaggc
acaggaaccaggcacccttggaagggagaaccctttatcctaagagagcagagggatgaa
gatccatcttctgtaactttttctgctgaataa

>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_4|78_aa
MIYMAWNAKDVAVSYYYFRQMAKMHPDPGTWEEFLEKFMTGKCVSGDWKNQFTVAQYEKF
EDYEKKMKESTLQFRSEI

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_4|237_bp
atgatctacatggcatggaatgccaaagatgtggctgtgtcttattattatttccgccag
atggcaaaaatgcacccagatcctggaacttgggaggagttcctggaaaaattcatgact
ggaaagtgtgtttcaggagactggaagaatcaattcactgtagcccagtatgagaaattt
gaagattatgaaaaaaaaatgaaagagtccacactgcagtttcgatcagaaatctaa

>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_5|291_aa
MWRRLWNWVRGRNWKSLEGLEEDRKMGESLELPRDLLNGIDENADNDIHNDNEIQAKVVS
DGDEKLIGSWNKVPQCGDHLPMGQQETTYLLTPLMCTPYMDCTDMLQGPSLSHRGQAWVQ
VFENVLVRTAKSNIPRSSLWSRRKTSVSAAVSKETSKEISKEPQKSPSYRLCRLQAVGGG
EFGSTQGQEEQAQKEKRDQRKAAALVMALRQTNFGGSERTENGAGQLPVRACYQCGLLGH
FKKDCPMRNKPPPHPCLLCQPLIHVCYADAITGRHTAPEGKGSLGQKPPTR

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_5|876_bp
atgtggaggcgactttggaactgggtaagagggagaaattggaaaagtttggagggccta
gaagaagacaggaaaatgggtgaaagtttggaacttcctagagacttgttgaatggcatt
gacgaaaatgctgacaatgatatacacaatgacaatgaaatccaggctaaggtggtctca
gatggagatgagaaacttattgggagctggaataaagtccctcagtgtggtgaccacctc
cctatgggacagcaagagacaacctacttactcaccccactaatgtgcacaccctacatg
gactgcacagatatgctgcagggaccatctctcagtcacagaggacaggcatgggtgcag
gtttttgagaatgtgttggtaaggactgctaaatccaacattcctcggtcctccttgtgg
tctaggaggaaaactagtgtttctgctgctgtgtcaaaggaaacaagcaaagaaatctcc
aaggaaccacaaaaatcccccagctatcggttatgtcgccttcaagctgtagggggaggg
gaatttggctcaacccagggccaagaggaacaggcccaaaaggaaaagcgagatcagaga
aaggccgcagccttagtcatggccctcagacaaacaaactttggtggttcagagaggaca
gaaaatggagcaggccaattacccgtgagggcttgttatcagtgtggtttactaggacac
tttaaaaaagattgtccaatgagaaacaagccaccccctcatccatgtctgctatgccaa
cccctcattcatgtctgctatgccgatgcaatcactggaaggcacactgccccagagggc
aaaggttctttaggccagaagcccccaaccagatga

>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_6|155_aa
MVLTLTVLKAEEWRLYAEKTLEAGVNDMHTLLTKIPRVRAESNLLGLTVNQAPIVVDLKP
GATLVWVHQYPLLLSKAIWGIHKHLERLHKHRIIVKCQSLWNTPLLSVRKLSSEYRLMQD
LHAVNQAIVTIHPVVPNLYTLMGHIPASATWFLQS

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_6|468_bp
atggtgttaacccttactgtcctgaaagctgaggaatggaggctatatgcagaaaagacc
ctggaagcaggagtaaatgatatgcacacattacttactaaaattcccagagttcgggct
gaaagtaacctgcttggactgacagtaaatcaggcaccaattgtagtggacttaaaacca
ggagcaactctggtttgggtccatcagtacccactactactttccaaggccatatgggga
atccacaaacacttagagcgacttcataagcatagaatcatagtcaaatgccagtcactg
tggaatacccctctcttgtcagtgaggaagctgtctagtgaatataggctaatgcaggat
ttgcatgcggtaaaccaagctatagtgaccatccacccagtggtgccaaacctgtatact
ttaatgggacatattccagcaagtgccacttggtttttacagtcctag

>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_7|369_aa
MNSELDYYEKFEEVHGILMYKDFVKYWDNVEAFQARPDDLVIATYPKSGTTWVSEIVYMI
YKEGDVEKCKEDVIFNRIPFLECRKENLMNGYQKRGDKIDTFPGKEAIRGACGQDYTSYF
VPRDEEQSIHKLHNTARRNYEPEIVALHEKGVRSILGLSYKGQVQYEGKSNFGVEKPYLS
QGPVKVQRHKRPPSAPFADTYLSLVPINPPLPRPTAFAAGSSVRPTAPAAHKELNPSGYM
LPASPEKEESELQKVRAESLESQLFSITDLMNWKHHAPSYTEKPQAFIDLMQSIIQTTNP
TWPDWKQLLLTLFNMEECQRLTQAALQWLEANAPADTVNAQAYAQGQFPETDPNWDPNDA
SQLQHLQQY

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_7|1110_bp
atgaattctgaacttgactattatgaaaagtttgaagaagtccatgggattctaatgtat
aaagattttgtcaaatattgggataatgtggaagcgttccaggcaagaccagatgatctt
gtcattgccacctaccctaaatctggtacaacctgggttagtgaaattgtgtatatgatc
tataaagagggtgatgtggaaaagtgcaaagaagatgtaatttttaatcgaatacctttc
ctggaatgcagaaaagaaaacctcatgaatggatatcagaaaagaggtgataaaattgat
acatttcctggaaaggaagccatcagaggagcttgtggacaggattatacatcatacttc
gttccaagagatgaagaacaatccatccacaaattacacaacactgccagacgaaattat
gaaccagaaattgtcgcccttcatgagaaaggtgtgagatccatattgggactttcttat
aaagggcaagtgcagtatgaggggaagagtaactttggagtggagaaaccctacctcagc
cagggtccagtaaaagtacagcgtcataaaagacctccttctgctccctttgctgacacc
taccttagcctcgttccaatcaacccccctttaccaagaccaactgcttttgctgctggt
tcatctgtgaggccaactgccccagctgcccacaaggagttaaatccgagtgggtacatg
ctcccagcctcacctgagaaggaggaatcagagctacagaaagttagggcggaaagccta
gaaagtcagctcttttcaatcactgatctcatgaactggaagcatcatgctccctcctac
acagagaagccacaggcttttatagacttgatgcagtccattattcagacaaccaatcca
acctggccagattggaaacagcttcttctgacactgtttaatatggaagagtgccagaga
ctgacacaggcagccctccagtggctagaagcaaatgctcctgcagacacagttaatgcc
caggcatatgcgcagggccagttccctgaaacagaccccaattgggacccaaatgacgca
tcccagctgcagcatctgcagcagtactga

>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_8|103_aa
MAKSGQCTAQGIDSEEASPKPWWLTHGVGLVGIQKSIIEVWKPPPRFQKMYRNAWMSREK
FAASVEPSWGTSARAMQKGNVGLELPQRVPTRTLPSEVVRRRL

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_8|312_bp
atggctaaaagtggccaatgtacagctcagggcattgattctgaggaggcaagtcccaag
ccttggtggcttacacatggtgttgggcttgtgggtatacagaagtcaataattgaggtt
tggaaacctccccctagatttcagaagatgtatagaaatgcctggatgtccagggagaag
tttgctgcaagtgtggagccctcatggggaacctctgctagggcaatgcagaagggaaat
gtggggttggagctgccacaaagagtccccacaaggacattgcctagtgaagttgtgaga
agacggctatga

>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_9|159_aa
MSLLGRIGSQKHKAKSHNRPSENWERQKLVVAESKSKSLKTREANSAAISLWPKAQGSPQ
TAGASPSVQRIKNLESDVQRQEEWKEAFSTGERRKPEDSARKAMLPSSGCFILVVLAAVL
VVSTHTEGRSSSSSPLSQMSVSSGNTLTDIPRNNTLPTT

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_9|480_bp
atgagtttattagggagaattggctcacaaaagcacaaggcaaagtcccataataggcca
tctgaaaactgggagagacagaaactggtagtggctgagtccaagtccaaaagcctcaaa
accagggaagccaacagtgcagcgatcagtctgtggccaaaagcccaagggtccccacaa
accgctggtgcaagtcccagtgtccaaaggataaagaacctagagtctgacgtccaaagg
caggaggagtggaaagaagcattcagcacaggagaaagaaggaagccagaagactcagca
agaaaagctatgctaccttcttcaggctgttttattctagttgtgctggcagctgttttg
gtggtgtccacccacactgaaggtcggtcttcctcttccagtccactgagtcaaatgtca
gtctcctctggcaacaccctcacagacatacccagaaacaatactttaccaaccacttag

>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_10|168_aa
MKLRTLAVSVTALKVARLEFVPSDVQMCSEFLPSGGLVGLLASGVKLQTFTVSVTAHKSS
VDPNSEQQQDLLQRRKEQSFHSVEGDPSGLPHGLRQPAFILLSGPTHILLIAEEAGSGLG
QHRKGLPQCSGGLKGSSSAVKVGAQAEEAQRASEGCEDCQRAVVVTSQ

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_10|507_bp
atgaagctgcggaccctcgcggtgagtgttacagctcttaaggtggcgcgtctggagttt
gttccttctgatgttcagatgtgttcggagtttcttccttctggtgggctcgtgggcttg
ctggcttcaggagtgaagctgcagaccttcacggtgagtgttacagctcataaaagcagt
gtggacccaaacagtgagcagcagcaagatttattgcaaagaaggaaagaacaaagcttc
cacagtgttgaaggggaccccagcgggttgccacatgggctcaggcagcctgcttttatt
ctcttatctggccccacccacatcctgctgattgctgaggaagccggctccggccttggc
cagcacagaaaggggctcccacagtgcagcggtgggctgaagggctcctcaagtgccgtc
aaagtgggagcccaggcagaggaggcgcagagagcgagcgagggctgtgaggactgccag
cgtgctgtcgtcgtcacctctcagtag

>gi568815594r:69741997_69957644|GENSCAN_predicted_peptide_11|165_aa
MPVLKSPTIPFFDPQIPKLTDLENLHLPLPLLQPLMQQVPQPIPQTLALPPQPLWSVPQP
KVLPIPQQVVPYPQRAVPVQALLLNQELLLNPTHQIYPVTQPLAPVHNPISVYNDKDKDY
SMTLIKVCSDNVLMENVLQTTDYKLKILDKFINAFYDLAASAIQK

>gi568815594r:69741997_69957644|GENSCAN_predicted_CDS_11|498_bp
atgcctgtccttaaatctccaacgatacccttttttgaccctcaaatcccaaaactcact
gatcttgaaaatctgcatcttcctctgcctctgctccagcccttgatgcagcaggtccct
cagcctattcctcagactcttgcacttccccctcagcccctgtggtctgttcctcagccc
aaagtcctgcctatcccccagcaagtggtgccctaccctcagagagctgtgcctgttcaa
gcccttctgctcaaccaagaacttctacttaaccccacccaccagatctaccctgtgact
cagccacttgccccagttcataaccccattagtgtgtataatgataaagacaaagattat
tcaatgacacttattaaagtatgctctgacaatgtcctcatggaaaatgttctacaaacc
actgactataaattaaagatattggacaagtttataaatgccttttatgatctggctgct
agtgccatccagaagtga