GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:44:07

Sequence gi568815595f:123109218_123371719 : 262502 bp : 45.28% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1727   1787   61  1  1   92   76    69 0.267   4.41
 1.02 Intr +   7014   7081   68  1  2   54   97    60 0.187   2.12
 1.03 Intr +  13440  13493   54  2  0   44   96    46 0.387   0.18
 1.04 Intr +  14849  14940   92  1  2  119   42   148 0.846  12.09
 1.05 Intr +  15055  15126   72  1  0  116  100   118 0.994  14.32
 1.06 Intr +  21263  21399  137  2  2   99   84   158 0.999  16.71
 1.07 Intr +  36305  36501  197  0  2   95  -14   140 0.317   3.63
 1.08 Intr +  36882  37042  161  2  2   75  106   198 0.808  19.09
 1.09 Intr +  37156  37274  119  1  2   52   31   174 0.949   8.21
 1.10 Intr +  41040  41147  108  1  0   74   89   165 0.716  15.46
 1.11 Intr +  45754  45824   71  2  2  102  116    82 0.990  11.30
 1.12 Intr +  52104  52238  135  2  0   76   98   271 0.998  27.66
 1.13 Intr +  54346  54478  133  0  1  104   33    38 0.590   0.12
 1.14 Intr +  55253  55338   86  0  2  121   74    65 0.656   7.94
 1.15 Intr +  78383  78496  114  1  0   34   77    71 0.015   1.24
 1.16 Intr + 115945 116065  121  0  1   46   99    51 0.008   2.07
 1.17 Intr + 136682 136797  116  0  2   99   84    36 0.450   4.47
 1.18 Term + 157140 157172   33  2  0  122   54    38 0.201   1.39
 1.19 PlyA + 160047 160052    6                               1.05

 2.05 PlyA - 161322 161317    6                               1.05
 2.04 Term - 165471 165430   42  0  0  112   55    42 0.713   0.46
 2.03 Intr - 169335 169284   52  2  1   97   82    -7 0.115  -1.49
 2.02 Intr - 169666 169506  161  1  2   51   89   111 0.185   6.29
 2.01 Init - 172146 172069   78  0  0   52   94    54 0.879   3.46
 2.00 Prom - 172234 172195   40                              -2.26

 3.29 PlyA - 174739 174734    6                               1.05
 3.28 Term - 175519 175391  129  1  0  139   43   255 0.998  24.28
 3.27 Intr - 175815 175730   86  1  2   61   76    92 0.315   4.84
 3.26 Intr - 176200 176170   31  1  1   75   97     5 0.267  -2.20
 3.25 Intr - 177592 177468  125  2  2  134  109   296 0.719  36.60
 3.24 Intr - 180773 180533  241  2  1   85  109   608 0.966  59.72
 3.23 Intr - 182159 181878  282  2  0   77   28   725 0.814  63.02
 3.22 Intr - 182505 182185  321  0  0  107   -3   115 0.356   0.36
 3.21 Intr - 186999 186867  133  2  1   83   94   172 0.995  17.95
 3.20 Intr - 188165 188136   30  1  0  108   89    43 0.923   3.65
 3.19 Intr - 191078 190903  176  2  2  101   22   575 0.997  50.94
 3.18 Intr - 194002 193838  165  1  0  118   69   254 0.999  26.66
 3.17 Intr - 194945 194850   96  2  0  113   64   161 0.793  16.41
 3.16 Intr - 205105 205018   88  0  1  133  113    63 0.993  13.27
 3.15 Intr - 208900 208803   98  1  2   96   81   145 0.900  13.41
 3.14 Intr - 210601 210457  145  0  1  129   87   201 0.994  24.38
 3.13 Intr - 211554 211532   23  0  2  134   89    49 0.996   5.94
 3.12 Intr - 216245 216105  141  2  0  120  101   236 0.998  28.65
 3.11 Intr - 218542 218401  142  0  1  107   25   319 0.999  27.86
 3.10 Intr - 219585 219427  159  2  0  103   96   148 0.975  16.20
 3.09 Intr - 221491 221279  213  0  0   96   53    61 0.643   1.23
 3.08 Intr - 221799 221672  128  0  2   62   99    64 0.977   4.38
 3.07 Intr - 223458 223347  112  2  1   81   73   276 0.190  25.78
 3.06 Intr - 238686 238565  122  0  2   79   75   162 0.375  13.29
 3.05 Intr - 240999 240784  216  0  0   34   44   117 0.438   0.60
 3.04 Intr - 243364 243215  150  1  0   92  109   136 0.997  16.46
 3.03 Intr - 243608 243457  152  0  2    0   59   117 0.579  -0.12
 3.02 Intr - 246233 246173   61  2  1   86   81    29 0.054   0.31
 3.01 Init - 260236 260174   63  1  0   92  110    36 0.687   5.50

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:123109218_123371719|GENSCAN_predicted_peptide_1|625_aa
DFRRLLKKEEKPLLIMFYAPWCSMCKRMMPHFQKAATQLRGHAFSKEPFDGHIFQQGTSV
RVLAGMNVYSSEFENIKEEYSVRGFPTICYFEKGRFLFQYDNYGSTAEDIVEWLKNPQPP
QPQVPETPWADEGGSVYHLTDEDFDQFVKEHSSVLVMFHAPWCGHCKKMKPEFEKAAEAL
HGEADVSFLSFPLTVLFERITDRWNHYDFPLQALLQLPWSVEASSTSSSGVLAAVDATVN
KALAERFHISEFPTLKYFKNGEKYAVPVLRTKKKFLEWMQKSQDGSDFLNPKTTVHMLIT
CLDQVTAGSPSGRSFIDALNQPTWEEQQTSVLHLVGDNFRETLKKKKHTLVMFYAPWCPH
CKKVIPHFTATADAFKDDRKIACAAVDCVKDKNQDLCQQEAVKGYPTFHYYHYGKFAEKY
DSDRTHPLPWQWPLDFTQGLDMKDRSIHLDIIETQLLSPFLLGTMNILQEVFGFQELFCA
GHGKVMLPGSEAGFLHRNGCLAGSVNAPPRAVPALCSCIPSPRIALISQQASRRTQINLS
DMQTEIKLRPPYQISMCELGSANGVTSAFSVDCKGAAHQRLEPATLSGIVGFILSLLCGA
LNLIRGFHAIESLLQVLEVGAYMIG

>gi568815595f:123109218_123371719|GENSCAN_predicted_CDS_1|1878_bp
gacttcagacggctcctgaagaaggaagagaagccgctcctgatcatgttttatgccccc
tggtgcagcatgtgcaagaggatgatgccgcatttccagaaggctgcgactcagctgcga
ggccacgccttctctaaagagccctttgatggtcacatcttccagcaagggacctcagtg
agggtgctggccgggatgaatgtctactcctctgaatttgaaaacatcaaggaggagtac
agcgtgcgcggcttccccaccatctgctattttgagaaaggacggttcttgttccagtat
gacaactatgggtccacagctgaggacattgtggagtggctgaagaatccgcagccgcca
cagccccaggtccctgagactccctgggcagatgagggcggctccgtttatcacctgacc
gatgaagactttgaccagtttgtgaaggaacactcctctgtcctcgtcatgttccacgcc
ccatggtgtggccactgtaagaaaatgaagccggagtttgagaaggcagcagaagccctc
catggagaagcggatgtaagcttcctttccttccccctcaccgttctctttgaaagaatc
actgacaggtggaatcattatgactttcccctgcaagccctgctgcagctcccgtggtcc
gtggaggccagcagtacctctagctctggtgtccttgcagctgtcgatgccactgtcaac
aaggccctggcagaaagattccacatctcagagtttcctacgttgaagtattttaagaat
ggagagaaatacgcagtgcctgtgctcaggacaaagaagaagtttctcgagtggatgcaa
aagagtcaagacggatctgacttcctcaaccctaaaaccaccgttcatatgctgatcacg
tgtcttgatcaggtcactgctggcagtccttctggacgcagcttcatcgacgcactaaac
cagcccacgtgggaagagcagcagacaagcgtgttgcacctggtgggggacaacttccgg
gagaccctgaagaagaagaaacacaccttggtcatgttctacgccccttggtgcccacac
tgtaagaaggtcattccgcactttactgctactgctgatgccttcaaagatgaccgaaag
attgcctgtgccgctgttgactgtgtcaaagacaagaaccaagacctgtgccagcaggag
gcggtcaagggctaccccactttccactactaccactatgggaagttcgcagaaaagtat
gacagcgaccgcacacacccacttccttggcagtggcccctggacttcacccaaggattg
gatatgaaagacagaagcatacatttagacatcattgaaacacaattattgagtcccttc
ctgttggggaccatgaacatcttacaagaggtgtttggcttccaggagctgttctgcgcc
gggcacgggaaggtgatgcttccaggttcagaagctggttttctccaccgcaacggttgc
ttggctgggtcagtcaacgcacctccaagagctgtgcctgccctgtgctcctgcatcccc
agcccacggattgccctgatctcccagcaagcgtccagacgcacacagataaatctttct
gacatgcagacggaaatcaagctgaggcctccttatcaaatttccatgtgcgaactgggg
tcagccaatggagtcacatcagcattttctgttgactgtaaaggtgctgctcaccagcga
ctggaaccagcaactctgtcagggattgtaggatttatccttagtcttttatgtggagct
ctgaatttaattcgaggctttcatgctatagaaagtctcctgcaggttcttgaagtagga
gcttacatgattggttga

>gi568815595f:123109218_123371719|GENSCAN_predicted_peptide_2|110_aa
MWPPAPKKVDIIKDFNVPAERCHFTEHLHDTAAEGCGCLPTPLIFPSTRVHTHEGPQSVG
TRAAAIHEQIVDQIRMFQVRRTLRWAKHLAYSRHLANSEGSYYCSYATKL

>gi568815595f:123109218_123371719|GENSCAN_predicted_CDS_2|333_bp
atgtggcctcctgctccaaagaaggtagacatcattaaggacttcaatgtgcctgcagaa
agatgtcattttactgagcatctgcatgatactgcagctgaaggctgtggctgcctcccc
acacccctcatcttcccatcaacgcgtgtgcacactcacgagggccctcagagtgtgggc
acaagggctgctgccatccatgagcaaattgtagatcagattcgaatgttccaagtcagg
aggactttaaggtgggcaaagcacctggcatacagcaggcatttggcaaatagtgagggc
agctactactgctcctatgctacaaaactatga

>gi568815595f:123109218_123371719|GENSCAN_predicted_peptide_3|1275_aa
MAVSTTLIFHLILMWAWAFLQIQPAMDGKYVQLPYRRVLIQGDSVSLEDISHDKPAKLLA
LRTSESPIDYARLLTVVGRVWGALSICLLAPGLVSNVLIFSCTNIVGVCTHYPAEVSQRQ
AFQETRECIQARLHSQRENQQQRVGEGMPAARIGPPPGKRETLKEGEEQRRRRVMPAEEL
VHNSKKDPRKCGGLCVLLYLEWSVDFISVLLGQQERLLLSVLPRHVAMEMKADINAKQED
MMFHKIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIK
ILGDCYYCVSGLPEARADHAHCCVEMGMDMIEAISVPVPYSSLGSFSQRKCVGGEGSADS
RSGGEAGSHVRILCRVRPLHFRGLMFPTDTQPGIELLVPLLPRCERLVREVTGVNVNMRV
GIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLNYLNGDYEVEPG
CGGERNAYLKEHSIETFLILRCTQKRKEEKAMIAKMNRQRTNSIGHNPPHWGAERPFYNH
LGGNQVSKEMKRMGFEDPKDKNAQESANPEDEVDEFLGRAIDARSIDRLRSEHVRKFLLT
FREPDLEKKYSKQVDDRFGAYVACASLVFLFICFVQITIVPHSIFMLSFYLTCSLLLTLV
VFVSVIYSCVKTLSRKIVRSKMNSTLVGVFTITLVFLAAFVNMFTCNSRDLLGCLAQEHN
ISASQVNACHVAESAVNYSLGDEQGFCGSPWPNCNFPEYFTYSVLLSLLACSVFLQISCI
GKLVLMLAIELIYVLIVEVPGVTLFDNADLLVTANAIDFFNNGTSQCPEHATKVALKVVT
PIIISVFVLALYLHAQQVESTARLDFLWKLQPGSGLWQTGSLQPHLQACSCSGLPAAGSA
PPERLAERVRGSEMSFLIVKVLLFGENLEVETAERGGETAVLANILGTSWHLRDWCFFSR
PRRGGGGGADIWAHIGIWATEEKEEMEELQAYNRRLLHNILPKDVAAHFLARERRNDELY
YQSCECVAVMFASIANFSEFYVELEANNEGVECLRLLNEIIADFDEVHSGAWAWGDPGLA
SFIQIISEDRFRQLEKIKTIGSTYMAASGLNDSTYDKVGKTHIKALADFAMKLMDQMKYI
NEHSFNNFQMKIGLNIGPVVAGVIGARKPQYDIWGNTVNVASRMDSTGVPDRIQQWDSEI
SEAIGQSVHGPQATLKQHTQAARHSAWHEQVLRVTTDMYQVLAANTYQLECRGVVKVKGK
GEMMTYFLNGGPPLS

>gi568815595f:123109218_123371719|GENSCAN_predicted_CDS_3|3828_bp
atggcagttagtaccacactcatctttcatttaattctgatgtgggcctgggcattcctg
cagattcaaccagccatggatggaaaatatgtacagttgccatatcggagggttttgatc
caaggtgattcagtgtctttagaggacatatcccatgacaagccagccaaacttctggct
ttgaggacatcagagagcccgatcgattatgctcggctgctcacagtggttggccgcgtg
tggggtgccctcagcatttgtttgctagcgccaggtcttgtctccaatgttctcattttc
tcctgcaccaacatcgtgggtgtctgcacccactatccggctgaggtctcccagagacag
gctttccaggagacccgagagtgcatccaggcgcggctccactcgcagcgggagaaccag
cagcagcgagtgggggaggggatgccagcagccagaattggacctcctcctgggaaaagg
gagaccctgaaggagggtgaggagcagcggaggaggagggtgatgccagctgaggagctt
gtgcacaacagcaagaaagaccccaggaagtgtgggggcctctgtgttctgctctatctg
gagtggagtgtggatttcatttcagtgctgctgggacagcaggaacggctcctgctgtct
gtccttccccgtcatgttgccatggagatgaaagcagacatcaacgccaagcaggaggat
atgatgttccataagatttacatccagaaacatgacaacgtgagcatcctgtttgctgac
atcgagggcttcaccagcctggcgtcccagtgcactgcacaggaactggtcatgaccctc
aacgagctcttcgcccgctttgacaagctggccgcagagaatcactgtttacgtattaag
atccttggggattgttattactgcgtctcggggctgcctgaagcaagggctgaccacgcc
cactgctgtgtggagatgggcatggacatgatcgaggccatctcggttcctgttccctac
agcagcctgggcagcttttcccagaggaagtgtgtgggaggggagggctctgcagactcc
aggagtggaggagaggctggcagccatgtgaggatcctgtgccgtgtgaggcccttgcac
ttccggggcctcatgtttcctacagacacccagccaggcatcgaactgctggttccactt
cttcccagatgtgaaaggttggtccgggaggtgacaggggtgaacgtgaacatgcgtgtg
ggaattcacagcgggcgagtacactgcggtgtccttggtctcaggaagtggcagttcgac
gtctggtctaacgatgtcacgctagccaaccacatggaggctggcggcaaggcaggacgc
atccacatcaccaaggctacactcaactacctgaatggggactacgaggtggagccaggc
tgtgggggcgagcgcaacgcctacctcaaggagcacagtatcgagaccttcctcatcctg
cgctgcacccagaagcggaaagaagagaaggccatgatcgccaagatgaaccgccagaga
accaactccatcgggcacaacccaccacactggggggctgagcgccccttctacaaccac
ctgggtggcaaccaggtgtccaaggagatgaagcggatgggctttgaagaccccaaggac
aagaacgcccaggagagtgcgaaccctgaggatgaagtggatgagtttctgggccgtgcc
attgacgccaggagcattgataggcttcggtctgagcacgtccgcaagttcctcctgacc
ttcagggagcctgacttagagaagaagtactccaagcaggtagacgaccgatttggtgcc
tatgtggcgtgtgcctcgctcgtcttcctcttcatctgctttgtccagatcaccatcgtg
ccccactccatattcatgctcagcttctacctgacctgttccctgctgctgaccttggtg
gtgtttgtgtctgtgatctactcctgcgtaaagaccctctccaggaagatcgtgcggtcc
aagatgaacagcaccctggttggggtgttcaccatcaccctggtgttcctggcggctttt
gtcaacatgttcacgtgcaactccagggacctgctgggctgcttggcacaggagcacaac
atcagcgcgagccaggtcaacgcgtgtcacgtggcggagtcggccgtcaactacagcctg
ggcgatgagcagggcttctgtggcagcccctggcccaactgcaacttccccgagtacttc
acctacagcgtgctgctcagcctgctggcctgctccgtgttcctgcagatcagctgcatc
gggaagctggtgctcatgctggccatcgagctcatctacgtgctcatcgtggaggtgcca
ggtgtcacgctcttcgacaacgccgacctgctggtcaccgccaacgccatagacttcttc
aacaacgggacctcccagtgccctgagcatgcaaccaaggtggcattgaaggtggtgacg
cccatcatcatctcagtctttgtgctggccctgtacctgcacgcccagcaggtggagtcc
actgcccgcctcgacttcctctggaaactgcagcctggttctggcctttggcagacagga
tccttgcagcctcacctccaggcttgttcctgctcggggctccctgctgcaggctcagca
cccccagagaggctggcagagagagttcgaggctcagaaatgtcttttctgattgtcaaa
gtcctgctctttggagaaaacctggaagtagaaacagcagagagaggaggagagacagcg
gtacttgccaacatcctgggcacaagttggcatttgcgtgactggtgctttttctccagg
ccacggagaggaggaggtggaggggccgacatctgggctcacattggcatctgggccaca
gaggagaaagaggagatggaggagctgcaggcctacaaccggcggctgctgcacaacatc
ctgcccaaggacgtggccgctcacttcctggcccgcgagcggcgcaatgatgagctctac
tatcagtcctgtgagtgtgtggcggtcatgttcgcctccatcgccaacttctccgagttc
tacgttgagctggaggccaacaacgagggtgtcgagtgcctgcggctactcaatgagatc
atcgctgactttgatgaggtgcacagcggggcctgggcttggggtgacccaggtttggcc
tccttcatccagatcatcagcgaggatcggttccggcagctggagaagatcaagaccatc
ggcagcacctacatggctgcctccggcctcaacgactctacctacgacaaggtgggcaag
acccacatcaaggcactggccgactttgccatgaagctgatggaccagatgaagtacatc
aatgagcactccttcaacaacttccagatgaagatcgggctcaacatcggccccgtggtg
gccggggtgataggggcacgaaagcctcagtacgacatctggggcaataccgtgaacgtg
gccagccgcatggacagcaccggtgtacccgaccgcatccagcaatgggatagtgaaatt
agtgaggccatcgggcagtcagtccatggaccacaggccacactgaaacagcacacgcaa
gctgcccgtcacagtgcctggcacgagcaggtgctgagggtcaccacagacatgtaccag
gtgctggctgccaacacgtaccagctggagtgccggggcgtggtcaaggtcaagggcaaa
ggcgagatgatgacctacttcctcaatggagggcccccgctcagttag