GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:45:38

Sequence gi568815595f:71654050_71855174 : 201125 bp : 41.49% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4264   4353   90  1  0   77   74    78 0.354   3.49
 1.02 Term +   9492   9597  106  0  1   60   48    94 0.155  -0.50
 1.03 PlyA +  11177  11182    6                               1.05

 2.03 PlyA -  11382  11377    6                               1.05
 2.02 Term -  17100  16899  202  2  1   56   54   115 0.888   0.78
 2.01 Init -  17413  17253  161  1  2   71   70   203 0.975  14.15
 2.00 Prom -  24870  24831   40                              -5.75

 3.11 PlyA -  25077  25072    6                               1.05
 3.10 Term -  30679  30633   47  2  2  108   32    80 0.657   0.79
 3.09 Intr -  36116  35961  156  0  0  117  111   183 0.999  22.56
 3.08 Intr -  36725  36555  171  0  0    4   -2   200 0.731   1.59
 3.07 Intr -  39892  39826   67  1  1   58  103    84 0.931   4.46
 3.06 Intr -  42471  42411   61  2  1   60   90    57 0.708   0.92
 3.05 Intr -  49458  49317  142  1  1  119   67   110 0.763  10.49
 3.04 Intr -  56031  55911  121  0  1   50   44    59 0.107  -3.15
 3.03 Intr -  56435  56363   73  1  1   73  110    54 0.196   4.59
 3.02 Intr -  65480  65299  182  2  2   61   71    73 0.082   0.64
 3.01 Init -  67660  67607   54  1  0   71   89    98 0.147   9.53
 3.00 Prom -  68485  68446   40                             -10.75

 4.00 Prom +  69564  69603   40                              -6.45
 4.01 Init +  70461  70554   94  2  1   78   89    47 0.106   4.39
 4.02 Intr +  70796  71001  206  0  2   28   45   221 0.056   9.80
 4.03 Intr +  71688  72023  336  2  0   13   80   254 0.108  11.89
 4.04 Intr +  77365  77472  108  0  0   80   11    92 0.384   0.26
 4.05 Intr +  83151  83219   69  2  0   69  105    65 0.876   4.76
 4.06 Term +  84094  84231  138  0  0   82   42    75 0.896  -0.72
 4.07 PlyA +  84475  84480    6                               1.05

 5.00 Prom +  94238  94277   40                              -5.15
 5.01 Sngl + 100001 101128 1128  1  0  116   55  1029 0.725  96.76
 5.02 PlyA + 102036 102041    6                               1.05

 6.07 PlyA - 102090 102085    6                               1.05
 6.06 Term - 105984 105851  134  1  2  101   47    63 0.727   0.77
 6.05 Intr - 107825 107620  206  1  2   70   80    53 0.776   0.62
 6.04 Intr - 110513 110393  121  0  1   85   85   110 0.239   9.03
 6.03 Intr - 120458 120396   63  0  0   98   94    56 0.053   4.97
 6.02 Intr - 127543 127423  121  1  1   81   15    39 0.042  -4.95
 6.01 Init - 131003 130908   96  2  0  104   86   182 0.947  17.96
 6.00 Prom - 136643 136604   40                              -3.55

 7.04 PlyA - 137807 137802    6                               1.05
 7.03 Term - 145866 145678  189  0  0   50   49    95 0.028  -1.73
 7.02 Intr - 148758 148587  172  2  1   75   45   149 0.040   8.32
 7.01 Init - 180758 180721   38  2  2   90  111    25 0.017   2.61
 7.00 Prom - 196662 196623   40                              -1.95


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:71654050_71855174|GENSCAN_predicted_peptide_1|65_aa
XGCKHPALEYFTNLQLENYCVQPGNWENWKLGEDGAQHALPRHQQDALQGSGLDIGVRTP
ICRTE

>gi568815595f:71654050_71855174|GENSCAN_predicted_CDS_1|198_bp
nngggatgtaaacatcctgccctggaatacttcaccaacctgcagctagaaaactactgt
gtacaaccgggcaactgggagaattggaaactgggtgaagatggtgcccagcatgctctc
cccaggcatcagcaggatgctttacaaggcagtggcctagatattggggtgaggaccccc
atctgcaggacagagtga

>gi568815595f:71654050_71855174|GENSCAN_predicted_peptide_2|120_aa
MSTIPRELALPLRAAPDAAMLSLPLFSDTGAPSRGQPSPWSLCSPLLGPLLLTRVYGHCK
CGTRLRVPRPSPTFTSHTALHTEVQLLDELKEQHSHQLIRDPILGNPFSALGGLLFWFAK

>gi568815595f:71654050_71855174|GENSCAN_predicted_CDS_2|363_bp
atgagcacaataccccgagagttagccctccccctgcgagcggctccggatgctgccatg
ctgtctctcccactcttctccgacacgggtgctccaagccgcggccagccaagcccctgg
tctctctgcagccctctgctgggccccctcctgctcacccgtgtgtatggccattgtaag
tgtggcactagattaagggttcccaggccttctcccacctttacatcacacacagctctg
cacacagaggttcagctgttagatgagttgaaggagcaacattcccaccagctcatccga
gatcccatcttaggaaacccattctccgcgcttgggggattgctgttttggtttgcgaag
tga

>gi568815595f:71654050_71855174|GENSCAN_predicted_peptide_3|357_aa
MVEAKGEAGTFFTGQQYQKGEPSYTAVTNPTQSWFSSTKPVFLKVYSLIRPSESPGCACY
NTGSPPCPRPTHSDLCGERSLPGATAAECASNLKKIYTVQTVQLCQCLSVPLFPISERQW
RLPCRVTKGLEVTWGEQDSVEREGLASAFTLHFIITFSSEIAVSLYRGGNVGFTGYMTCE
GYAENLGLKSREEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAAEKGFLEG
GIRKQEEFIGKEQTSKPQKADEQSRMHNLAPVRVGADSADHSKVPESLAGNDEVIGVSVS
VRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGGRGKH

>gi568815595f:71654050_71855174|GENSCAN_predicted_CDS_3|1074_bp
atggtagaagccaaaggagaagcaggcaccttcttcacagggcagcagtaccaaaaaggt
gagccatcatatacagctgtcaccaaccctacccaatcatggtttagctccaccaagcct
gtgtttctcaaagtgtattccctcatccgcccatcagaatcacctggctgtgcttgttac
aatacaggctccccaccctgccccagacctactcattcagacctctgtggtgaaagatcc
ctccctggtgccacagcagctgagtgcgcatcaaatctgaagaaaatctacacagtacag
acagtacagctctgccagtgcctctctgtgcctctgttccccatcagtgagaggcagtgg
cgccttccctgcagggttactaaaggtttagaggtcacatggggagagcaggatagtgtg
gagcgtgaaggcctagcaagtgctttcactttgcatttcatcattacattttccagtgaa
atagctgtatccttatacagaggaggcaacgtgggtttcacgggctacatgacctgtgaa
ggttatgctgagaacctaggtcttaaatccagggaagaggagagtaatgcaaagggtggc
gtatggaagatgaaagtccccaaggacagcacgtccacagtttggaaagagttgctgtta
gcaaccatcggggaacagttcacagactgtgccgcagcagaaaagggatttctagaggga
ggcatcaggaagcaggaagaattcataggaaaggagcagacaagtaaaccgcagaaagca
gatgagcagtcgagaatgcacaatctggctccagttcgtgttggggcagatagcgctgac
cactccaaggtccctgaaagcttggcaggaaatgatgaagtaataggagttagtgtcagt
gttcgggaccgagaagacgtcgtccaagtctggaatgtaaatgcctctttagtgggtgaa
gcgactgttttagaaaagatctatgaacttctgccccacataacttttaaagcagtattt
tataaaccccatgaagagcatcatgcttttgaaggtggacgtggaaaacactaa

>gi568815595f:71654050_71855174|GENSCAN_predicted_peptide_4|316_aa
MAPGLSLEKAIIHPLPDKVSCCSLLNLQRIAAGTRPPPARLPSPTALPARRVPIGREQGV
ESVAETFRAALSSPGPEARTPNSRPARPEAGFRPGGASPGPCKRAAGWSGRLGTDGGMDG
TGDGAPDPRGAREGGMDRHTSSQKDGVKAGRWLEERRRDGGQMEAQLGVTDKWRGEPMAK
WIKRLQCPRVQNKGRERRTNKRTTDWGMRLEQASTLKQVFSPSSLFFSVHVSAAHINCRS
SETEYPVQLQLQETLGKVSLLRSHLYDLENETQRWRSWQPENANKRRQEESSFSSQRSSL
ARQKTNYASQMQQKKL

>gi568815595f:71654050_71855174|GENSCAN_predicted_CDS_4|951_bp
atggcacctgggttgtcccttgagaaagccataattcacccccttcctgacaaggtcagc
tgctgctcattattgaatctccagcgcatagcagcagggacgcggccacccccagctcgc
ctaccctctcccacggccctgccagcacgccgcgttccgatcggaagggaacaaggggta
gaaagtgttgccgaaacttttcgggctgcgctgtcctcccccggcccggaggcgaggacg
ccgaacagccgcccggcgcggcccgaagctggcttccgacccggcggggcgagtcccggg
ccatgcaaaagggcagcgggatggagcggcaggctagggacagatggagggatggatggg
acaggggatggagccccagacccacgtggtgcgagggaaggagggatggacagacatacc
agcagtcagaaggatggagtgaaggctggcagatggctggaggagagaaggagggatgga
gggcagatggaagcacagttgggtgtgacagataaatggagaggggaaccgatggccaaa
tggataaagagactccagtgcccgcgagtacagaacaaagggcgagaaagaagaacgaac
aagagaaccaccgactggggcatgaggttggagcaggcctccactctaaagcaggtcttc
tccccttcctcattatttttttcagtgcacgtgtcagctgcacacatcaactgccgatct
tccgaaacagaatatccagtccaattgcaacttcaggaaactttaggaaaagtttcactt
ctccgaagtcatctctatgatctggaaaatgagactcagagatggagaagctggcaacct
gaaaatgctaacaagcgcagacaagaagagtctagtttctctagccaaaggagcagcctt
gcaagacagaaaactaactatgccagccaaatgcaacagaaaaaactgtga

>gi568815595f:71654050_71855174|GENSCAN_predicted_peptide_5|375_aa
MANASEPGGSGGGEAAALGLKLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDL
CLADGLRALACLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGVGVTR
YLAIAHHRFYAERLAGWPCAAMLVCAAWALALAAAFPPVLDGGGDDEDAPCALEQRPDGA
PGALGFLLLLAVVVGATHLVYLRLLFFIHDRRKMRPARLVPAVSHDWTFHGPGATGQAAA
NWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEFKTEKRLCKMFYAVTLLFLLLWGPY
VVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQFPCCQSPR
TTQATHPCDLKGIGL

>gi568815595f:71654050_71855174|GENSCAN_predicted_CDS_5|1128_bp
atggcgaacgcgagcgagccgggtggcagcggcggcggcgaggcggccgccctgggcctc
aagctggccacgctcagcctgctgctgtgcgtgagcctagcgggcaacgtgctgttcgcg
ctgctgatcgtgcgggagcgcagcctgcaccgcgccccgtactacctgctgctcgacctg
tgcctggccgacgggctgcgcgcgctcgcctgcctcccggccgtcatgctggcggcgcgg
cgtgcggcggccgcggcgggggcgccgccgggcgcgctgggctgcaagctgctcgccttc
ctggccgcgctcttctgcttccacgccgccttcctgctgctgggcgtgggcgtcacccgc
tacctggccatcgcgcaccaccgcttctatgcagagcgcctggccggctggccgtgcgcc
gccatgctggtgtgcgccgcctgggcgctggcgctggccgcggccttcccgccagtgctg
gacggcggtggcgacgacgaggacgcgccgtgcgccctggagcagcggcccgacggcgcc
cccggcgcgctgggcttcctgctgctgctggccgtggtggtgggcgccacgcacctcgtc
tacctccgcctgctcttcttcatccacgaccgccgcaagatgcggcccgcgcgcctggtg
cccgccgtcagccacgactggaccttccacggcccgggcgccaccggccaggcggccgcc
aactggacggcgggcttcggccgcgggcccacgccgcccgcgcttgtgggcatccggccc
gcagggccgggccgcggcgcgcgccgcctcctcgtgctggaagaattcaagacggagaag
aggctgtgcaagatgttctacgccgtcacgctgctcttcctgctcctctgggggccctac
gtcgtggccagctacctgcgggtcctggtgcggcccggcgccgtcccccaggcctacctg
acggcctccgtgtggctgaccttcgcgcaggccggcatcaaccccgtcgtgtgcttcctc
ttcaacagggagctgagggactgcttcagggcccagttcccctgctgccagagcccccgg
accacccaggcgacccatccctgcgacctgaaaggcattggtttatga

>gi568815595f:71654050_71855174|GENSCAN_predicted_peptide_6|246_aa
MRSLCCAPLLLLLLLPPLLLTPRAGDAAVITGACDKDSQCGGGMCCAVSIWVKSIRICTP
MGKLGDSCHPLTQQFWKWKAGKKKEEEKQKEKGVVAMQRVGSVGRHTHPSKTGLDVGTDG
GCDNTYYSHNGMFCAGITGMSCRNCYLFSKSAAPSLSLCPSPLPNTETGFLLAFNIYWLD
GFIQVVFQIPVIRFMISKKFGPGREGPEVQWSWQPTQGAHLKNSILGQLHFITPATSVHT
ENLKYQ

>gi568815595f:71654050_71855174|GENSCAN_predicted_CDS_6|741_bp
atgaggagcctgtgctgcgccccactcctgctcctcttgctgctgccgccgctgctgctc
acgccccgcgctggggacgccgccgtgatcaccggggcttgtgacaaggactcccaatgt
ggtggaggcatgtgctgtgctgtcagtatctgggtcaagagcataaggatttgcacacct
atgggcaaactgggagacagctgccatccactgactcaacaattttggaaatggaaggca
ggaaagaagaaagaggaagagaagcaaaaggaaaaaggagtggttgccatgcagagagtg
ggatcagtcggcaggcacactcacccatccaaaaccggtttggatgttgggactgatgga
gggtgtgacaacacttattattcacataatggaatgttctgtgctggaattacaggcatg
agctgccgcaactgctatctctttagcaagagtgctgccccttccttatccctgtgtcct
tctccactgcccaacacagaaactggcttcttattagctttcaatatctattggttagat
ggatttattcaggtggttttccagattcctgtaattagatttatgatatcaaaaaagttt
ggtccagggagagagggtcctgaagttcagtggtcttggcagcccacacagggtgcacat
ctgaagaacagtatcttgggtcagctgcattttataaccccagccacctcggtgcacaca
gaaaacctaaaataccagtaa

>gi568815595f:71654050_71855174|GENSCAN_predicted_peptide_7|132_aa
MLLMRVLFCSFFRHRPRAGDGAAMVPPPGAMCEDQHSKNGWVGRWKKPLPLMASWSMGTS
PGLLSPDCFYRLRSPSYGQLCCFFSPGEIQRARRSLMGVYRVTLLCSEVGYTALAFAAAA
SIPSSFVNLYFP

>gi568815595f:71654050_71855174|GENSCAN_predicted_CDS_7|399_bp
atgctgctcatgagagtgttgttctgttcattcttcagacataggccccgtgctggtgat
ggagcagccatggtgcccccaccaggagctatgtgtgaggaccaacattccaagaatggc
tgggtgggaagatggaagaagcccctgcctctgatggcatcgtggagcatgggcaccagc
cctggactgctgtctccagattgcttttataggttgagaagtccctcttacgggcagtta
tgttgcttcttcagtcctggagagatacaaagggcacgtcggtcactgatgggtgtgtac
agagtaaccctgctttgctcagaagtgggatacacggctcttgcctttgccgctgcagca
tccatcccctcttcctttgttaacctttattttccttag