GENSCAN 1.0	Date run:  6-Nov-116	Time: 02:21:36

Sequence gi568815595r:58534282_58753784 : 219503 bp : 46.41% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 Intr -    241     79  163  2  1  123   47   220 0.831  20.43
 1.06 Intr -    916    666  251  0  2   73   87   160 0.903  11.48
 1.05 Intr -   2951   2838  114  1  0   50   99    82 0.932   5.06
 1.04 Intr -  32414  32311  104  2  2  129    9   101 0.009   5.27
 1.03 Intr -  33083  32927  157  1  1   96   94   311 0.999  32.51
 1.02 Intr -  35584  35410  175  2  1   83   97   322 0.532  31.60
 1.01 Init -  45542  45494   49  2  1   76   96    49 0.758   5.76
 1.00 Prom -  46471  46432   40                              -3.06

 2.03 PlyA -  50007  50002    6                               1.05
 2.02 Term -  50742  50654   89  1  2   16   42   109 0.395  -3.08
 2.01 Init -  52655  52577   79  2  1   98  114   101 0.978  15.01
 2.00 Prom -  64506  64467   40                              -3.06

 3.00 Prom +  75025  75064   40                              -5.26
 3.01 Init +  75992  76040   49  1  1   61   72    21 0.197  -1.04
 3.02 Intr +  78697  78868  172  2  1   73   92   132 0.964  11.10
 3.03 Intr +  82832  82999  168  2  0   68   94   115 0.542   9.16
 3.04 Intr +  86706  86760   55  0  1   99   81   -23 0.479  -2.92
 3.05 Intr +  88960  89252  293  0  2   79   94    87 0.323   4.33
 3.06 Intr +  90207  90429  223  0  1   83  113    -3 0.370  -0.17
 3.07 Intr +  92011  92104   94  0  1   99  100    68 0.666   8.64
 3.08 Term +  96012  96034   23  1  2   88   49    29 0.089  -2.53
 3.09 PlyA +  97516  97521    6                               1.05

 4.15 PlyA -  98243  98238    6                              -0.45
 4.14 Term - 100087  99998   90  1  0  115   46    74 0.981   3.62
 4.13 Intr - 102139 102013  127  0  1  113   94   114 0.994  15.18
 4.12 Intr - 102944 102860   85  0  1  137  108   110 0.999  16.78
 4.11 Intr - 105896 105846   51  0  0   91   92    27 0.825   2.28
 4.10 Intr - 109439 109381   59  1  2  117  101    63 0.959   9.03
 4.09 Intr - 111345 111228  118  1  1  101  103   137 0.995  16.02
 4.08 Intr - 119500 119393  108  2  0   54   92   134 0.638  10.66
 4.07 Intr - 123490 123444   47  0  2   83   84    13 0.266  -1.55
 4.06 Intr - 129721 129629   93  0  0   25   94    73 0.399   0.68
 4.05 Intr - 132456 132257  200  0  2   50   86   117 0.416   5.85
 4.04 Intr - 140788 140662  127  0  1   82   54    39 0.091   0.58
 4.03 Intr - 165496 165304  193  2  1   70   95    60 0.052   3.45
 4.02 Intr - 175216 175091  126  2  0   46   74    55 0.202   0.55
 4.01 Init - 175417 175327   91  1  1   63   96    80 0.554   6.95
 4.00 Prom - 200077 200038   40                              -1.16

 5.02 PlyA - 202168 202163    6                               1.05
 5.01 Term - 208291 208179  113  2  2  133   38   116 0.949   9.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  32414  32307  108  2  0  129   49   107 0.990   9.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:58534282_58753784|GENSCAN_predicted_peptide_1|338_aa
MTPNIRGLLPSSPWLSAAMYSEIQRERADIGGLMARPEYREWNPELIKPKKLLNPVKASR
SHQELHRELLMNHRRGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFEQELLR
RQQRLNQLEKPPEKEEDHAPEFIKVRENLRRIATLTSEERELPYVGGEKGRTTSLPEAAA
YSRGEASPAYSADTGQRGARFFALTNAESRPSEQPGWKCLSIVTRQIQDRMGSPVHRVSL
GDTWSRQMHPDIESERYMQSFDVERLTNILDGGAQNTALRRKVESIIHSYPEFSCKDNYF
MTQNERYKAAMRRAFHIRLIARRLGWLEDGRELGYAYS

>gi568815595r:58534282_58753784|GENSCAN_predicted_CDS_1|1014_bp
atgacgcccaacatccgaggactactgcccagttctccttggctgtcagccgccatgtac
tcggagatccagagggagcgggcagacattgggggcctgatggcccggccagaatacaga
gagtggaatccggagctcatcaagcccaagaagctgctgaaccccgtgaaggcctctcgg
agtcaccaggagctccaccgggagctgctcatgaaccacagaaggggccttggtgtggac
agcaagccagagctgcagcgtgtcctagagcaccgccggcggaaccagctcatcaagaag
aagaaggaggagctggaagccaagcggctgcagtgcccctttgagcaggagctgctgaga
cggcagcagaggctgaaccagctggaaaaaccaccagagaaggaagaggatcacgccccc
gagtttattaaagtcagggaaaacctgcggagaattgccacactgaccagcgaagagaga
gagctcccctatgtgggaggagagaagggcaggaccacaagcctgccagaggctgcggcc
tacagccggggagaggccagcccggcctacagtgcggacacaggacagaggggagccagg
ttctttgcactgaccaatgctgagagcagaccctcggagcagccgggttggaagtgtctc
tccatagtcaccagacagatccaggataggatgggcagcccagtgcaccgagtgtcattg
ggggatacctggagcaggcaaatgcaccccgacatagagagcgagaggtatatgcagtcc
tttgacgtggaacggctcaccaacatccttgatggaggtgcccagaacactgcactccgc
aggaaagttgagagcatcatccacagttacccggagtttagctgtaaggacaattatttc
atgacccagaatgagcgttataaggctgccatgcggagggcattccacatccggttgata
gctcggcgcctgggttggttagaagatggtcgtgaattaggctacgcttacagn

>gi568815595r:58534282_58753784|GENSCAN_predicted_peptide_2|55_aa
MAQRLGEWARGPSDATGLYRAVLLRSVLPIDGVQVLGVMNKELDKTHKQSKERMK

>gi568815595r:58534282_58753784|GENSCAN_predicted_CDS_2|168_bp
atggcgcagaggctgggcgagtgggcccgggggccctccgatgccaccgggctctaccgg
gctgtgctgctccggtcggtgttacccattgacggtgtccaggttcttggcgtcatgaac
aaagaattggacaaaacgcacaaacaaagcaaggaaagaatgaagtaa

>gi568815595r:58534282_58753784|GENSCAN_predicted_peptide_3|358_aa
MVSNSPKATRLASGIPGIDGAQGTVSTAVLPVTSSNGASVTTSLEGDDGRQLHIASRDSA
LKSSPREPTACFVRKLLCHFTVPACDGRVSMGPSQTLAGSGPAGLNGRPLPERAPHHTTQ
NDPYLFPELRGEMSTLTFSGVSAQAILKSRQLSLNEGECKAMSVLVNNRVRGQDSFRATK
NLGGVGFGEMFYRTKAKCPNLQGAMLPPPALQKLHLQPLEQQQQDHVPFPEHPLSAGHLA
PACCGSWRERCLSSWGAITMKCPALSLPLSNSHAIGRQICGSKGGLWLALTNHVIPSIPC
QCGFRILGKAYAPDIPQGTKDADAGVRRAHFQKQFSGNAVYKPPAESSGLEACAATYW

>gi568815595r:58534282_58753784|GENSCAN_predicted_CDS_3|1077_bp
atggtaagtaactctcccaaggccacacggctggcaagtggcatcccaggaattgacggc
gcacagggaacagtttctactgctgtccttcccgttacctcctccaatggggcttcagtc
accacctctctggaaggtgatgatggtcggcagctccatatcgccagccgtgactctgcc
ctgaaatctagcccaagggagccaactgcctgttttgtcaggaaactcctgtgtcacttc
acagtgcctgcttgtgatggcagagtcagcatgggaccttcacagacgctggccggttca
gggcctgcaggtctcaatggcaggcctcttcctgaacgtgcaccacatcatacaactcag
aatgacccctacctgttcccagagctcaggggagaaatgtcaactctaactttttcagga
gtttcagcccaggccattctgaagtcaaggcaactttctcttaatgaaggtgaatgcaaa
gcgatgagtgtcttggtaaacaacagggtcagaggacaggactctttcagggccacaaaa
aacctgggtggtgttgggtttggagaaatgttttacagaacgaaagccaagtgtccaaac
ctccagggggctatgctgccgcctcctgccctgcagaagctccacctgcagcctctagag
cagcagcaacaggaccacgtgccattccctgagcacccactgagtgctgggcacctcgcc
ccagcctgctgtggaagctggagagaacgctgtctctcctcctggggggccattacaatg
aaatgtccagcactctcccttccattgagtaacagccatgccattgggagacagatctgt
ggctccaagggtgggctctggttggccttaaccaaccacgtgatcccttccatcccctgc
cagtgtgggtttaggattctaggcaaagcctatgcccctgacattccccaggggacaaag
gatgctgacgcaggggtccgcagagcacatttccagaaacagttctcaggcaatgctgtc
tacaaacccccagctgagagctcaggcttagaagcttgtgccgccacctactggtga

>gi568815595r:58534282_58753784|GENSCAN_predicted_peptide_4|504_aa
MPHDQNVSGIGSFQWVLGLADFKNEAADPQGVKLQTFAVSVTALKGGMSGVVHSTQWVYG
LTGFRNEAADLHLWIVNYSPSIQAHCQMRNGASNPKDRAEEEEELSPKSLLKVENLKNEN
QTFCTMKIDLFLSSCLLIRKNYFKFHMEPKKSLYSQDNPKQKEQSLEASRYLTSIYATRR
RAVCEATTPPATGRWDCQKLAQGGGQLGQGPTAPAGPPRLLHRSREVGASSPRVRPPKNG
KGYGSRGNDLGLHRLQKGDLTKEATFHKVWNSSGEDSRPVLGPSSRALTGCQGVLRLLAL
IFAIVTTWMFIRSYMSFSMKTIRLPRWLEVKKYKCGLIKPCPANYFAFKICSGAANVVGP
TMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFDMYSGDVMHLVKFLKEIPGGA
LVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWVFIGAKDLRGKSPFEQFLKNS
PDTNKYEGWPELLEMEGCMPPKPF

>gi568815595r:58534282_58753784|GENSCAN_predicted_CDS_4|1515_bp
atgcctcatgatcaaaatgtgtccggaattggttccttccagtgggttcttggtcttgct
gacttcaagaatgaagctgcggaccctcagggagtgaagctgcagaccttcgcagtgagt
gttacagctcttaaaggtggcatgtcaggagttgttcattccacccagtgggtttatggt
ctcactggcttcaggaatgaagctgcagaccttcacttgtggattgtcaattattctcca
tccatccaggcccactgtcagatgaggaacggggcctccaaccctaaagatagagcagag
gaggaagaagaactctctccaaagtcactgctcaaagtggagaatttaaaaaatgaaaat
caaaccttttgcaccatgaagattgacctctttctttccagttgtctcctaattagaaaa
aactactttaaatttcatatggaaccaaaaaagagcctgtatagccaagacaatcctaag
caaaaagaacaaagtctagaggcatcacgctacctgacttcaatttatgctacaaggagg
agggccgtctgtgaggccactacccctccagcaactgggaggtgggactgtcagaagctg
gcccagggtggtggtcagctgggtcagggacctacggcacctgctggaccacctcgcctt
ctccatcgaagcagggaagtgggagcctcgagccctcgggtacgtccccccaagaatgga
aagggctatggttccagagggaatgatctaggcctgcacaggctgcagaagggggacctc
acaaaggaggccacattccacaaagtatggaattcctctggcgaggacagcaggccagtc
ctgggccccagctccagagcactcacgggctgccagggtgtgcttcgcctcctggccctc
atctttgccatagtcacgacatggatgtttattcgaagctacatgagcttcagcatgaaa
accatccgtctgccacgctggctggaggttaaaaagtacaagtgtggcctcatcaagccc
tgcccagccaactactttgcgtttaaaatctgcagtggggccgccaacgtcgtgggccct
actatgtgctttgaagaccgcatgatcatgagtcctgtgaaaaacaatgtgggcagaggc
ctaaacatcgccctggtgaatggaaccacgggagctgtgctgggacagaaggcatttgac
atgtactctggagatgttatgcacctagtgaaattccttaaagaaattccggggggtgca
ctggtgctggtggcctcctacgacgatccagggaccaaaatgaacgatgaaagcaggaaa
ctcttctctgacttggggagttcctacgcaaaacaactgggcttccgggacagctgggtc
ttcataggagccaaagacctcaggggtaaaagcccctttgagcagttcttaaagaacagc
ccagacacaaacaaatacgagggatggccagagctgctggagatggagggctgcatgccc
ccgaagccattttag

>gi568815595r:58534282_58753784|GENSCAN_predicted_peptide_5|37_aa
XEEDLSVEEDEEVLTLLYDPCLNCYFDPQTGKYYELV

>gi568815595r:58534282_58753784|GENSCAN_predicted_CDS_5|114_bp
ngtgaagaagacctcagtgtggaagaggacgaggaagtactgactttgttgtatgaccct
tgtctgaactgttactttgacccccaaacagggaaatactatgagttggtataa