GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:02:54

Sequence gi568815595f:40210892_40412011 : 201120 bp : 41.01% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    796    876   81  0  0   64   68    75 0.239   4.12
 1.02 Intr +   4992   5054   63  2  0   63   94    49 0.036   1.00
 1.03 Intr +  17757  17884  128  2  2  120   76    47 0.000   5.26
 1.04 Intr +  20198  20403  206  2  2   77   98    85 0.000   6.32
 1.05 Intr +  21278  21403  126  0  0   51   64    68 0.520   0.43
 1.06 Intr +  23005  23392  388  2  1   69   95   277 0.502  19.42
 1.07 Intr +  30472  30523   52  1  1   61   37    71 0.000  -2.71
 1.08 Intr +  33495  33716  222  2  0   60   94   346 0.129  29.80
 1.09 Intr +  39331  39435  105  0  0   84   89    56 0.714   4.79
 1.10 Intr +  39548  39608   61  1  1   87   91    47 0.751   2.29
 1.11 Intr +  40990  41108  119  2  2   91   54    85 0.077   4.66
 1.12 Intr +  49845  49983  139  2  1   67   90    43 0.004   1.52
 1.13 Intr +  58534  58674  141  2  0   81   69   102 0.499   7.00
 1.14 Intr +  58825  59002  178  2  1   67   71   137 0.541   7.96
 1.15 Intr +  61229  61409  181  2  1  -11   -4   208 0.303   0.65
 1.16 Term +  61582  61815  234  0  0   72   45   257 0.888  15.14
 1.17 PlyA +  62374  62379    6                               1.05

 2.00 Prom +  64364  64403   40                              -5.75
 2.01 Sngl +  64830  65924 1095  2  0   60   39   257 0.726  14.73
 2.02 PlyA +  66605  66610    6                               1.05

 3.03 PlyA -  67053  67048    6                               1.05
 3.02 Term -  79774  79626  149  2  2   85   44   125 0.309   4.88
 3.01 Init -  88772  88721   52  2  1   64   67    61 0.763   2.97
 3.00 Prom -  90333  90294   40                              -4.15

 4.00 Prom +  92808  92847   40                              -6.25
 4.01 Init +  95636  95727   92  1  2   52   78    65 0.578   1.91
 4.02 Intr +  99193  99320  128  1  2   95  -61   120 0.739  -2.80
 4.03 Intr + 100002 100165  164  1  2   94   98   170 0.990  17.37
 4.04 Intr + 100579 100680  102  0  0   65  105    71 0.823   5.95
 4.05 Term + 118455 118625  171  2  0   48   41   133 0.041   1.44
 4.06 PlyA + 120565 120570    6                               1.05

 5.06 PlyA - 121701 121696    6                               1.05
 5.05 Term - 122348 121918  431  0  2   -6   39   300 0.587  10.18
 5.04 Intr - 135321 134515  807  1  0   67   49   361 0.225  20.59
 5.03 Intr - 137873 137842   32  1  2   35  111    47 0.466  -1.44
 5.02 Intr - 144195 144006  190  1  1   83   76    94 0.543   5.42
 5.01 Init - 145842 145719  124  0  1   83   36    85 0.206   3.18
 5.00 Prom - 149166 149127   40                              -5.75

 6.00 Prom + 150761 150800   40                              -1.75
 6.01 Init + 172488 172584   97  2  1   82   25    96 0.234   3.22
 6.02 Intr + 176309 176370   62  0  2   28  110    80 0.284   1.73
 6.03 Intr + 177155 177206   52  1  1  114   92    25 0.473   3.06
 6.04 Intr + 181132 181259  128  2  2  107  115   133 0.899  17.38
 6.05 Intr + 190003 190120  118  0  1   98  116   140 0.650  16.92
 6.06 Intr + 200921 201071  151  0  1   90   88    71 0.004   5.60

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  16871  16838   34  1  1   95  105     8 0.933   0.51
S.002 Intr -  18891  18729  163  1  1   40  116   127 0.811   8.81
S.003 Init +  20214  20403  190  2  1   72   98   122 0.849  10.86
S.004 Sngl -  29576  28785  792  2  0   68   48   269 0.978  14.55
S.005 Init -  55888  55775  114  1  0   67   98   118 0.965  10.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:40210892_40412011|GENSCAN_predicted_peptide_1|807_aa
MALSPTGFAAYGPKALKTLTVPVACQAEKREALAVHLELQLLSRVLEQVLEQPLRWRQEN
LSSAPGTCTHPFILKAFLPTLYYIKTYITHSAGITGMSHHAQPVQSLLPAGSWFPSEMVQ
VFKQTSGVPGEAVALSSDQLPGPPHSDLREDANAFRGQDTKPPEPTETWLLGQSSSYCGT
DRLRLRRSPLAHVSSPQNGLTEVLKVINATEELIAGSTGPWESPQVPPDRQKGMFPRGTD
QVRLDEQLTSLEENVRGYGGALSRVNVCEEEADEIVAYREECKDTHIHTHTTTTIANTFS
GRTLGWIPQKQTLDEDLCACDLLGNAPKGGCTKEDVALELVETTMVTQGPPTSPKSADMN
SNVALSLQVYLAAGTVYGLETQLTELEDAARCIHSGTDETHLADLEDQVATAAAQVHHAE
LQISDIESRISALTIAGLNIAPCVRFTRRRDQKQRTQVQTIDTSRQQRRKLPAPPVKAEK
IETSSVTTIKTFNHNFILQGSSTNRTKERKGTTKDLMNNTDWVGDLQRKNCIPIVLETGK
SKVKGPASSKGLLAVSSHGRRQKGLLEYLPVILKILPNSSRMPSSNVTSMMVPDSFLAQD
NPGITQIIEMASVLYHINPDRKLKPFTISLNTTTTKKTISFPLVADLNEGQLVNEGHQRM
VELEEAEERRGRLTPHTARYPSETKLPDERSGSNISCSTIFAVLQPLLLIPRQTGSGVDL
QQTPTDLQLRECSSSPAMEQSWMENDFNELREEGFRQSNFSELEEEVRTHHKEAKNLEKR
LKEWLTRRTSIEKSLNDLMELKTMAQE

>gi568815595f:40210892_40412011|GENSCAN_predicted_CDS_1|2424_bp
atggctttatctcccactggctttgctgcctatggtcccaaggctctaaaaactctcact
gtaccagtggcatgccaggctgaaaaaagagaagctttagctgtccacttagagctacag
ctcttatccagagtgcttgaacaggtgttggaacagcccctgaggtggagacaggaaaat
ctctcttctgctccaggcacatgtacacatccttttatcctcaaagcctttctgcccacc
ttatattatatcaagacttatatcacacacagtgctgggattacaggcatgagccaccac
gcccagcccgttcagtcacttctgccagctggaagctggttcccttctgaaatggtccag
gtctttaagcagacctcaggtgttccaggtgaagctgtggcgctctcctcagaccagctg
cctgggcctcctcactctgacttaagggaagatgcaaatgccttcaggggccaagacaca
aagccccctgaaccaacagaaacatggctattgggtcagtcaagcagctattgtggaaca
gacaggctaaggctaaggaggagccctctggcacatgtgtcctcaccccagaacggcttg
acagaagtcctgaaagtcatcaatgccacagaggagttgatagcaggatctacagggccc
tgggagtccccacaagtccctcctgacagacagaaggggatgtttcctcgtgggacagac
caagtgagactggatgagcagctgacttccctggaagaaaatgtaagagggtatggaggt
gccctgtctagggtgaatgtatgtgaagaagaagctgatgaaattgtagcttatcgtgaa
gagtgcaaggacacacacatacacacacacaccactaccactatagcaaatacattctca
ggaaggaccttaggttggattccccagaagcagaccctagatgaggatttgtgtgcatgt
gacttattagggaatgctcccaagggaggctgcactaaagaggatgtagcactagaactt
gtggagacaaccatggttactcagggacccccaaccagtcccaagtctgcagacatgaac
tcaaatgtagcactgtctctacaggtatacctggcagcaggcactgtgtatggactggag
acccagctgactgagctagaagatgccgcccgctgcatccacagtggcactgatgagacc
catctggcggatctggaggaccaggtggccacggctgcagcccaagtccaccatgctgaa
ctccagatttcagatattgagagccggatttcagccctgaccattgcaggattaaacata
gcaccatgtgtgcgcttcacaagaagacgggatcagaagcaaaggacccaggtacaaacc
atagatacatcaaggcagcaaaggaggaaactgcctgctccaccggtgaaagctgaaaaa
attgagacatcttcagtgactaccattaaaacatttaaccacaacttcattctccaaggc
tcctcaacaaacaggactaaggaaaggaaaggcaccaccaaggatttgatgaataacaca
gactgggtgggtgatttacaaagaaaaaactgtattcctatagttctggaaactgggaag
tctaaggtcaaagggcctgcatctagcaagggccttcttgctgtgtcatcccatggcaga
aggcagaagggtctcttggaataccttcctgtgatactgaaaatcctaccgaattcttca
agaatgcccagctcaaatgttacctctatgatggtccctgactccttcctagcccaggat
aatcctggcataacccagataatcgagatggcctctgtcttgtaccatatcaatccagac
agaaaactcaaacccttcaccatttcacttaatacaacaacaacaaagaaaacaatcagc
tttcccctagtagcagacctcaatgaaggacagctggtgaatgaagggcaccaacgaatg
gtggagttggaagaagcagaggagaggaggggcagactgacacctcacacggccaggtac
ccctctgagacgaagcttccagatgaacgatcaggcagcaatatttcctgttcaacaata
ttcgctgttctgcagcctctgctgctgatacccaggcaaacagggtctggagtggacctc
cagcaaactccaacagacctgcagctgagggaatgcagctcctcgccagcaatggaacaa
agctggatggagaatgactttaacgagttgagagaagaaggcttcagacaatcaaacttc
tccgagctagaggaggaagttcgaacccatcacaaagaagctaaaaaccttgaaaaaaga
ttaaaagaatggctaactagaagaaccagcatagagaagtccttaaatgacctgatggag
ctgaaaaccatggcacaagaatga

>gi568815595f:40210892_40412011|GENSCAN_predicted_peptide_2|364_aa
MSELPFTITSKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIV
KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARTAKSILSQKNKAGGIMLP
DFKLHYKATVTKPAWYWYQNRDIDQWNRTEPSEIIPHIYHHLIFDKPDKNKQWGKDSLFN
QWCWENWLAICRKLKLNPFLTLYTKINSRWIKDLHVRAKTIKTIEENLGNTIQDTGMGKD
FMSKTPKAMATKAKIDKWDLIKLKSFCIAKETTIRVNRQPTEWEKIFAIYSSDKGLISRI
YKELKQIYKKKNKQPHQKVGEGYEQTLLKRRHFCSQQTHEKMLIITGHQTNANRNHNEIP
SHTS

>gi568815595f:40210892_40412011|GENSCAN_predicted_CDS_2|1095_bp
atgagtgaactcccattcacaattacttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaattataaaccactgctcaacgaaataaaa
gaggacacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcactgccaagtcaatcctaagtcaaaagaacaaagctggaggcatcatgctacct
gacttcaaactacactacaaggctacagtaaccaaaccagcatggtactggtaccaaaac
agagatatagaccaatggaacagaacagagccctcagaaataataccacacatctaccac
catctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaat
caatggtgctgggaaaactggctagccatatgtagaaagctgaaactgaatcccttcctt
acactttatacaaaaattaattcaagatggattaaagacttacatgttagagctaaaacc
ataaaaaccatagaagaaaacctaggcaataccattcaggacacaggcatgggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcatagcaaaagaaactaccattagagtgaacaggcaacct
acagaatgggagaaaatttttgcaatctattcatctgacaaagggctaatatccagaatc
tacaaagaactcaaacaaatttacaagaaaaaaaacaaacaaccgcatcaaaaagtgggc
gaaggatatgaacagacacttctcaaaagaagacatttttgcagccaacagacacatgaa
aaaatgctcatcatcactggccatcagacaaatgcaaatcgaaaccacaatgagatacca
tctcacaccagttag

>gi568815595f:40210892_40412011|GENSCAN_predicted_peptide_3|66_aa
MDSKGHSDEVSDGTEEQVGMGSGPVAQAQYSLPGRVGGASSAVKSETQAEAPLATEVTER
IVCHYC

>gi568815595f:40210892_40412011|GENSCAN_predicted_CDS_3|201_bp
atggacagtaaaggccattctgatgaggtttcagatggaactgaagaacaagtgggcatg
ggatctgggccagtagcgcaagctcagtacagcctgccaggccgagtgggtggagccagc
tcagcagtcaaaagtgaaactcaggcagaggcaccactggccacagaggttaccgaaaga
atcgtgtgtcactactgttag

>gi568815595f:40210892_40412011|GENSCAN_predicted_peptide_4|218_aa
MLNSEHSSWGYSSVMPTNAGNLNGALSHPPRGALSRRPENGDGAPGDPFPEDSAGLRALL
SEPRPRALRHPLPHPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKK
KLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEDSESEALDSDSGSTTFQL
YGLIKPKPASLSQPQFSQQQLKDNCASDQNDYSRHKMR

>gi568815595f:40210892_40412011|GENSCAN_predicted_CDS_4|657_bp
atgctgaattcagagcatagcagctggggctattcatcagttatgcccactaacgcagga
aatctgaatggtgcattatcacatccaccacgtggggctttgtctcggcgcccagaaaat
ggcgacggggcccctggcgaccccttccccgaggacagcgccggactccgagccctcctc
tcggagccccggccgcgggccctgcgccaccccctgccccacccctttgctgatgcaact
aagggtgacgacttactcccggcagggactgaggattacattcatataagaatccagcaa
cggaacggcagaaagacactgactactgttcagggcattgcagatgattatgacaaaaag
aaacttgtgaaagctttcaaaaagaaatttgcctgtaatggtactgtgattgaacatcct
gaatacggagaggttattcagcttcaaggtgaccaaagaaaaaacatctgccagtttctc
ttggaggactcagaatcagaagccctggattcagattcgggctctaccactttccagctt
tatggcctgatcaagccaaagccagccagtctctcacagcctcagttttctcagcagcaa
cttaaggataattgtgcctcggatcagaatgactattctcggcacaaaatgagatga

>gi568815595f:40210892_40412011|GENSCAN_predicted_peptide_5|527_aa
MLGELQCPEDFQHLHPSPADSVFFGGTNGRCSVQVVLLKNTVFSFFGLSSHGQAVVRTSC
VSGCLLASGSPTLHPPGAPLPLQPYSSEMRASWRSELWSITWESRPYLESNSSKAVLEVL
ARTIRQEKQIKGIQLGKEEVKLSLFTDDMIVYLENPIVSAQNLLKRISNFSKVSGYKINV
QKSQAFLYTNNRQTESQIMSELPFTIASNRIKYLGIRLTKDVKDLFKENYKPLLSEIEED
TNKWKNIPCSWTGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQRRAH
IAKSILSQKNKAGSITLPDFKLYYKATVTKTAWYWYQNRDTDQWKRTEPSEIKLTFNQIS
YYLTSGRPNCQYFRLLNFTQSNLTALQAAIWERPGGKAFLGTDLTFMGVNERFVPWSPYS
GVRVKWRRVNFSASVPFRGCTQSCVLDFPDHFIQSRTRLQGPQEMECADLHSNISSANNN
YTDEVQQALTVQSASSGSHASSHSLIHSSPQHRSSAGTCIFLFTLQA

>gi568815595f:40210892_40412011|GENSCAN_predicted_CDS_5|1584_bp
atgctgggggaacttcagtgtcctgaagacttccagcatcttcacccttctccagctgac
tctgtgttttttggaggaacaaatggaagatgctcagtccaggttgtccttctaaagaac
acagtcttctccttctttggactatcatctcatggacaggctgtggtccggacttcgtgt
gtaagtggttgcttattggctagtggcagccccacactacatcctccaggtgctcctctt
ccactgcagccttacagctcagaaatgagagcatcctggaggagtgaactgtggagcatc
acctgggaatccaggccttacctggaatctaatagctccaaagcagtgttggaagttctg
gccaggacaatcaggcaggagaaacaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttacagatgacatgattgtatatctagaaaaccccatcgtctcagcc
caaaatctccttaagcggataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaacagaataaaatacctaggaatccgacttacgaag
gatgtgaaggacctcttcaaggagaactacaaaccactgctcagtgaaatagaagaggat
acaaacaaatggaagaacattccatgctcatggacaggaagaatcaatattgtgaaaatg
gccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaagaagagcccac
attgccaagtcaatcctaagccaaaagaacaaagctggaagcatcacactacctgacttc
aaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagat
acagaccaatggaaaagaacagagccctcagaaattaagctgacttttaatcaaatttct
tattacctgacttcaggcaggccaaactgccaatatttccggcttttgaactttacccaa
agtaaccttacagcccttcaagcagccatctgggaaagaccaggtggaaaggcgttcttg
gggacagacctaactttcatgggtgtcaatgagcgctttgtcccgtggtctccctattct
ggtgtacgtgtgaagtggaggagggtcaatttctcagcttctgtccccttcagggggtgt
actcagagctgcgtgttagacttccctgaccattttatccagagcagaaccaggctccaa
ggaccccaggaaatggagtgcgcggaccttcacagtaatatcagcagtgctaacaataac
tataccgacgaagttcagcaagcactcactgtgcagagtgcaagctcaggcagtcatgca
tcatcacactcactcattcactcctccccgcaacaccgcagctctgccggcacttgcatc
ttccttttcactctccaggcctag

>gi568815595f:40210892_40412011|GENSCAN_predicted_peptide_6|203_aa
MGPVGLGKWIREEENGHREMCETVAKIQKSVHALAAGRLCGSASRLLRIGSAQLGEKMFT
VLTRQPCEQAGLKALYRTPTIIALVVLLVSIVVLVSITVIQIHKQEVLPPGLKYGIVLDA
GSSRTTVYVYQWPAEKENNTGVVSQTFKCSVKGSGISSYGNNPQDVPRAFEECMQKVKGQ
VPSHLHGSTPIHLGATAGMRLLS

>gi568815595f:40210892_40412011|GENSCAN_predicted_CDS_6|609_bp
atggggcctgttggcttgggaaaatggatcagagaggaagaaaatggacacagagagatg
tgtgagaccgttgccaagatccagaaaagtgtgcatgcgctggccgcgggccgcctctgc
ggcagcgctagtcgccttctccgaatcggctccgcacagctaggagaaaagatgttcact
gtgctgacccgccaaccatgtgagcaagcaggcctcaaggccctctaccgaactccaacc
atcattgccttggtggtcttgcttgtgagtattgtggtacttgtgagtatcactgtcatc
cagatccacaagcaagaggtcctccctccaggactgaagtatggtattgtgctggatgcc
gggtcttcaagaaccacagtctacgtgtatcaatggccagcagaaaaagagaataatacc
ggagtggtcagtcaaaccttcaaatgtagtgtgaaaggctctggaatctccagctatgga
aataacccccaagatgtccccagagcctttgaggagtgtatgcaaaaagtcaaggggcag
gttccatcccacctccacggatccacccccattcacctgggagccacggctgggatgcgc
ttgctgagn